RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 SNX14Q9Y5W7 946 aa19.75■□□□□ 0.75
RANBP3-209ENST00000587411 SGSM2O43147 1006 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 RAB11FIP3O75154 756 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 C17orf53Q8N3J3 647 aaPredicted RBP19.74■□□□□ 0.75
RANBP3-209ENST00000587411 MIS18AQ9NYP9 233 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 SOS1Q07889 1333 aaPredicted RBP19.74■□□□□ 0.75
RANBP3-209ENST00000587411 ZBTB7CA1YPR0 619 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 CCDC30Q5VVM6 783 aa19.74■□□□□ 0.75
RANBP3-209ENST00000587411 BCL2L12Q9HB09 334 aa19.73■□□□□ 0.75
RANBP3-209ENST00000587411 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
RANBP3-209ENST00000587411 AK2P54819 239 aa19.73■□□□□ 0.75
RANBP3-209ENST00000587411 TSC1Q92574 1164 aa19.73■□□□□ 0.75
RANBP3-209ENST00000587411 IL25Q9H293 177 aa19.73■□□□□ 0.75
RANBP3-209ENST00000587411 NCKAP5LQ9HCH0 1330 aa19.73■□□□□ 0.75
RANBP3-209ENST00000587411 TECPR2O15040 1411 aa19.72■□□□□ 0.75
RANBP3-209ENST00000587411 PPP4R3BQ5MIZ7 849 aa19.72■□□□□ 0.75
RANBP3-209ENST00000587411 JARID2Q92833 1246 aaPredicted RBP19.72■□□□□ 0.75
RANBP3-209ENST00000587411 LRRFIP2Q9Y608 721 aaKnown RBP19.72■□□□□ 0.75
RANBP3-209ENST00000587411 FIBPO43427 364 aa19.72■□□□□ 0.75
RANBP3-209ENST00000587411 XRN1Q8IZH2 1706 aaKnown RBP19.71■□□□□ 0.75
RANBP3-209ENST00000587411 RUFY3Q7L099 469 aa19.71■□□□□ 0.75
RANBP3-209ENST00000587411 HSP90AB2PQ58FF8 381 aa19.71■□□□□ 0.75
RANBP3-209ENST00000587411 SSH3Q8TE77 659 aa19.71■□□□□ 0.75
RANBP3-209ENST00000587411 LSG1Q9H089 658 aaKnown RBP19.71■□□□□ 0.75
RANBP3-209ENST00000587411 MTHFSDQ2M296 383 aaKnown RBP19.7■□□□□ 0.74
RANBP3-209ENST00000587411 GIMAP6Q6P9H5 292 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 PDCL2Q8N4E4 241 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 CCDC192P0DO97 292 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 METP08581 1390 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 NRXN3Q9Y4C0 1643 aa19.7■□□□□ 0.74
RANBP3-209ENST00000587411 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
RANBP3-209ENST00000587411 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 KCNF1Q9H3M0 494 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 USP31Q70CQ4 1352 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 HTATSF1O43719 755 aaKnown RBP19.69■□□□□ 0.74
RANBP3-209ENST00000587411 PLCB2Q00722 1185 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 N4BP2Q86UW6 1770 aaPredicted RBP19.69■□□□□ 0.74
RANBP3-209ENST00000587411 PI4K2BQ8TCG2 481 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 FAM208AQ9UK61 1670 aaKnown RBP19.69■□□□□ 0.74
RANBP3-209ENST00000587411 MAP3K19Q56UN5 1328 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 PDIA4P13667 645 aaKnown RBP19.69■□□□□ 0.74
RANBP3-209ENST00000587411 ANKRD7Q92527 254 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 ZSCAN31Q96LW9 406 aaPredicted RBP19.69■□□□□ 0.74
RANBP3-209ENST00000587411 IL1RAPL2Q9NP60 686 aa19.69■□□□□ 0.74
RANBP3-209ENST00000587411 CBX1P83916 185 aa19.68■□□□□ 0.74
RANBP3-209ENST00000587411 SH2B1Q9NRF2 756 aaPredicted RBP19.68■□□□□ 0.74
RANBP3-209ENST00000587411 PYCARDQ9ULZ3 195 aa19.68■□□□□ 0.74
RANBP3-209ENST00000587411 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
RANBP3-209ENST00000587411 CTIFO43310 598 aaKnown RBP19.68■□□□□ 0.74
RANBP3-209ENST00000587411 FOXO3O43524 673 aa19.68■□□□□ 0.74
RANBP3-209ENST00000587411 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
RANBP3-209ENST00000587411 MTMR6Q9Y217 621 aa19.68■□□□□ 0.74
RANBP3-209ENST00000587411 TCHHQ07283 1943 aa19.67■□□□□ 0.74
RANBP3-209ENST00000587411 KDRP35968 1356 aa19.67■□□□□ 0.74
RANBP3-209ENST00000587411 RIOK3O14730 519 aaKnown RBP19.67■□□□□ 0.74
RANBP3-209ENST00000587411 RASEFQ8IZ41 740 aa19.67■□□□□ 0.74
RANBP3-209ENST00000587411 USP44Q9H0E7 712 aa19.67■□□□□ 0.74
RANBP3-209ENST00000587411 AP5Z1O43299 807 aa19.67■□□□□ 0.74
RANBP3-209ENST00000587411 KIF20AO95235 890 aa19.67■□□□□ 0.74
RANBP3-209ENST00000587411 ZHX1Q9UKY1 873 aaPredicted RBP19.67■□□□□ 0.74
RANBP3-209ENST00000587411 POLA2Q14181 598 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 ATP2B3Q16720 1220 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 GJB2P29033 226 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 DNM1Q05193 864 aaKnown RBP19.66■□□□□ 0.74
RANBP3-209ENST00000587411 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 FAM200AQ8TCP9 573 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 RHPN1Q8TCX5 695 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 KIF1BPQ96EK5 621 aa19.66■□□□□ 0.74
RANBP3-209ENST00000587411 MAP3K5Q99683 1374 aa19.65■□□□□ 0.74
RANBP3-209ENST00000587411 SURF6O75683 361 aaKnown RBP19.65■□□□□ 0.74
RANBP3-209ENST00000587411 TM6SF1Q9BZW5 370 aa19.65■□□□□ 0.74
RANBP3-209ENST00000587411 LRRC37A3O60309 1634 aa19.64■□□□□ 0.74
RANBP3-209ENST00000587411 CASTP20810 708 aaKnown RBP19.64■□□□□ 0.73
RANBP3-209ENST00000587411 TPRNQ4KMQ1 711 aa19.64■□□□□ 0.73
RANBP3-209ENST00000587411 RUFY2Q8WXA3 655 aa19.64■□□□□ 0.73
RANBP3-209ENST00000587411 SYCP1Q15431 976 aa19.64■□□□□ 0.73
RANBP3-209ENST00000587411 USP6P35125 1406 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 PLEKHG3A1L390 1219 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 MAP4K4O95819 1239 aaPredicted RBP19.63■□□□□ 0.73
RANBP3-209ENST00000587411 CCDC83Q8IWF9 413 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 FEZ1Q99689 392 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 BABAM1Q9NWV8 329 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
RANBP3-209ENST00000587411 FAM177BA6PVY3 158 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 PPP1R42Q7Z4L9 355 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 SPC24Q8NBT2 197 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 PDRG1Q9NUG6 133 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 ACEP12821 1306 aa19.63■□□□□ 0.73
RANBP3-209ENST00000587411 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 HSP90AB4PQ58FF6 505 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 ELP1O95163 1332 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 CCDC171Q6TFL3 1326 aa19.62■□□□□ 0.73
RANBP3-209ENST00000587411 FLT4P35916 1363 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms