RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 TGFB2P61812 414 aa17.56■□□□□ 0.4
H3F3B-205ENST00000587171 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
H3F3B-205ENST00000587171 ZPR1O75312 459 aa17.55■□□□□ 0.4
H3F3B-205ENST00000587171 DDR1Q08345 913 aa17.55■□□□□ 0.4
H3F3B-205ENST00000587171 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
H3F3B-205ENST00000587171 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
H3F3B-205ENST00000587171 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
H3F3B-205ENST00000587171 NARFQ9UHQ1 456 aa17.55■□□□□ 0.4
H3F3B-205ENST00000587171 AFDNP55196 1824 aaKnown RBP17.55■□□□□ 0.4
H3F3B-205ENST00000587171 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
H3F3B-205ENST00000587171 TM4SF1P30408 202 aa17.54■□□□□ 0.4
H3F3B-205ENST00000587171 MCM10Q7L590 875 aa17.54■□□□□ 0.4
H3F3B-205ENST00000587171 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
H3F3B-205ENST00000587171 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
H3F3B-205ENST00000587171 NRXN2Q9P2S2 1712 aa17.53■□□□□ 0.4
H3F3B-205ENST00000587171 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
H3F3B-205ENST00000587171 KCNQ3O43525 872 aa17.53■□□□□ 0.4
H3F3B-205ENST00000587171 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
H3F3B-205ENST00000587171 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
H3F3B-205ENST00000587171 RALBP1Q15311 655 aa17.53■□□□□ 0.4
H3F3B-205ENST00000587171 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.4
H3F3B-205ENST00000587171 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
H3F3B-205ENST00000587171 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
H3F3B-205ENST00000587171 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.4
H3F3B-205ENST00000587171 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
H3F3B-205ENST00000587171 A0A0G2JLW4 131 aa17.51■□□□□ 0.39
H3F3B-205ENST00000587171 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
H3F3B-205ENST00000587171 NEFMP07197 916 aa17.5■□□□□ 0.39
H3F3B-205ENST00000587171 DPEP1P16444 411 aa17.5■□□□□ 0.39
H3F3B-205ENST00000587171 NFIXQ14938 502 aa17.5■□□□□ 0.39
H3F3B-205ENST00000587171 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
H3F3B-205ENST00000587171 A0A087WZG4 1122 aa17.49■□□□□ 0.39
H3F3B-205ENST00000587171 IL6STP40189 918 aaPredicted RBP17.49■□□□□ 0.39
H3F3B-205ENST00000587171 ADCY9O60503 1353 aa17.49■□□□□ 0.39
H3F3B-205ENST00000587171 BCORQ6W2J9 1755 aa17.48■□□□□ 0.39
H3F3B-205ENST00000587171 A1BGP04217 495 aa17.48■□□□□ 0.39
H3F3B-205ENST00000587171 KCNA3P22001 575 aa17.48■□□□□ 0.39
H3F3B-205ENST00000587171 TAF7Q15545 349 aaPredicted RBP17.47■□□□□ 0.39
H3F3B-205ENST00000587171 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
H3F3B-205ENST00000587171 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
H3F3B-205ENST00000587171 BCS1LQ9Y276 419 aa17.47■□□□□ 0.39
H3F3B-205ENST00000587171 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
H3F3B-205ENST00000587171 LAMB4A4D0S4 1761 aa17.47■□□□□ 0.39
H3F3B-205ENST00000587171 DLEC1Q9Y238 1755 aa17.47■□□□□ 0.39
H3F3B-205ENST00000587171 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
H3F3B-205ENST00000587171 PRAMEF22A3QJZ6 481 aa17.46■□□□□ 0.39
H3F3B-205ENST00000587171 SNRPA1P09661 255 aaKnown RBP17.46■□□□□ 0.39
H3F3B-205ENST00000587171 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
H3F3B-205ENST00000587171 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.38
H3F3B-205ENST00000587171 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
H3F3B-205ENST00000587171 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
H3F3B-205ENST00000587171 SERPINB2P05120 415 aa17.44■□□□□ 0.38
H3F3B-205ENST00000587171 TBC1D2BQ9UPU7 963 aa17.44■□□□□ 0.38
H3F3B-205ENST00000587171 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
H3F3B-205ENST00000587171 CHRNA5P30532 468 aa17.43■□□□□ 0.38
H3F3B-205ENST00000587171 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
H3F3B-205ENST00000587171 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
H3F3B-205ENST00000587171 MIS18AQ9NYP9 233 aa17.43■□□□□ 0.38
H3F3B-205ENST00000587171 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
H3F3B-205ENST00000587171 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
H3F3B-205ENST00000587171 TBC1D9BQ66K14 1250 aa17.42■□□□□ 0.38
H3F3B-205ENST00000587171 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
H3F3B-205ENST00000587171 DALRD3Q5D0E6 543 aaKnown RBP17.41■□□□□ 0.38
H3F3B-205ENST00000587171 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
H3F3B-205ENST00000587171 DZIP3Q86Y13 1208 aaKnown RBP17.41■□□□□ 0.38
H3F3B-205ENST00000587171 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
H3F3B-205ENST00000587171 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
H3F3B-205ENST00000587171 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
H3F3B-205ENST00000587171 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
H3F3B-205ENST00000587171 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
H3F3B-205ENST00000587171 CEP350Q5VT06 3117 aa17.4■□□□□ 0.38
H3F3B-205ENST00000587171 SBF1O95248 1867 aa17.39■□□□□ 0.38
H3F3B-205ENST00000587171 C1QTNF8P60827 252 aa17.39■□□□□ 0.37
H3F3B-205ENST00000587171 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
H3F3B-205ENST00000587171 COL11A2P13942 1736 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-205ENST00000587171 RIPK4P57078 832 aa17.38■□□□□ 0.37
H3F3B-205ENST00000587171 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
H3F3B-205ENST00000587171 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
H3F3B-205ENST00000587171 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
H3F3B-205ENST00000587171 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
H3F3B-205ENST00000587171 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
H3F3B-205ENST00000587171 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
H3F3B-205ENST00000587171 GPBP1L1Q9HC44 474 aaPredicted RBP17.37■□□□□ 0.37
H3F3B-205ENST00000587171 RGL2O15211 777 aa17.36■□□□□ 0.37
H3F3B-205ENST00000587171 NUP98P52948 1817 aa17.35■□□□□ 0.37
H3F3B-205ENST00000587171 H0YIN7 160 aa17.35■□□□□ 0.37
H3F3B-205ENST00000587171 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
H3F3B-205ENST00000587171 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
H3F3B-205ENST00000587171 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
H3F3B-205ENST00000587171 BRIP1Q9BX63 1249 aa17.35■□□□□ 0.37
H3F3B-205ENST00000587171 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
H3F3B-205ENST00000587171 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
H3F3B-205ENST00000587171 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
H3F3B-205ENST00000587171 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
H3F3B-205ENST00000587171 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
H3F3B-205ENST00000587171 TSPYL4Q9UJ04 414 aa17.34■□□□□ 0.37
H3F3B-205ENST00000587171 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
H3F3B-205ENST00000587171 CCDC88AQ3V6T2 1871 aa17.33■□□□□ 0.37
H3F3B-205ENST00000587171 PDE6BP35913 854 aa17.33■□□□□ 0.36
H3F3B-205ENST00000587171 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms