RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 TOMM70O94826 608 aa20.58■□□□□ 0.89
MBD1-215ENST00000586884 C9orf131Q5VYM1 1079 aa20.58■□□□□ 0.89
MBD1-215ENST00000586884 ZBTB1Q9Y2K1 713 aa20.58■□□□□ 0.89
MBD1-215ENST00000586884 CHRNA5P30532 468 aa20.57■□□□□ 0.88
MBD1-215ENST00000586884 COL3A1P02461 1466 aaPredicted RBP20.56■□□□□ 0.88
MBD1-215ENST00000586884 NFIXQ14938 502 aa20.55■□□□□ 0.88
MBD1-215ENST00000586884 TTC5Q8N0Z6 440 aa20.55■□□□□ 0.88
MBD1-215ENST00000586884 NMRK2Q9NPI5 230 aa20.55■□□□□ 0.88
MBD1-215ENST00000586884 STARD3NLO95772 234 aa20.54■□□□□ 0.88
MBD1-215ENST00000586884 APLP1P51693 650 aa20.54■□□□□ 0.88
MBD1-215ENST00000586884 GAS2L2Q8NHY3 880 aa20.54■□□□□ 0.88
MBD1-215ENST00000586884 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
MBD1-215ENST00000586884 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
MBD1-215ENST00000586884 BCL2L12Q9HB09 334 aa20.53■□□□□ 0.88
MBD1-215ENST00000586884 GNAT3A8MTJ3 354 aa20.52■□□□□ 0.88
MBD1-215ENST00000586884 TEFQ10587 303 aa20.52■□□□□ 0.88
MBD1-215ENST00000586884 RNF181Q9P0P0 153 aa20.52■□□□□ 0.88
MBD1-215ENST00000586884 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
MBD1-215ENST00000586884 KDM2BQ8NHM5 1336 aa20.52■□□□□ 0.87
MBD1-215ENST00000586884 NRXN2Q9P2S2 1712 aa20.51■□□□□ 0.87
MBD1-215ENST00000586884 A0A087WZG4 1122 aa20.51■□□□□ 0.87
MBD1-215ENST00000586884 SERPINB2P05120 415 aa20.51■□□□□ 0.87
MBD1-215ENST00000586884 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
MBD1-215ENST00000586884 EIF5P55010 431 aaKnown RBP20.5■□□□□ 0.87
MBD1-215ENST00000586884 IFFO2Q5TF58 517 aa20.5■□□□□ 0.87
MBD1-215ENST00000586884 ZNF790Q6PG37 636 aa20.5■□□□□ 0.87
MBD1-215ENST00000586884 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
MBD1-215ENST00000586884 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
MBD1-215ENST00000586884 RBM46Q8TBY0 533 aaKnown RBP20.5■□□□□ 0.87
MBD1-215ENST00000586884 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
MBD1-215ENST00000586884 HEG1Q9ULI3 1381 aa20.49■□□□□ 0.87
MBD1-215ENST00000586884 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
MBD1-215ENST00000586884 ZC3H4Q9UPT8 1303 aaKnown RBP20.49■□□□□ 0.87
MBD1-215ENST00000586884 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
MBD1-215ENST00000586884 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
MBD1-215ENST00000586884 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
MBD1-215ENST00000586884 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
MBD1-215ENST00000586884 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
MBD1-215ENST00000586884 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
MBD1-215ENST00000586884 H0YIN7 160 aa20.45■□□□□ 0.86
MBD1-215ENST00000586884 IL6STP40189 918 aaPredicted RBP20.45■□□□□ 0.86
MBD1-215ENST00000586884 FSTL1Q12841 308 aa20.45■□□□□ 0.86
MBD1-215ENST00000586884 BICDL1Q6ZP65 573 aa20.45■□□□□ 0.86
MBD1-215ENST00000586884 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
MBD1-215ENST00000586884 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
MBD1-215ENST00000586884 DLEC1Q9Y238 1755 aa20.44■□□□□ 0.86
MBD1-215ENST00000586884 LMNB1P20700 586 aa20.44■□□□□ 0.86
MBD1-215ENST00000586884 RASSF7Q02833 373 aa20.44■□□□□ 0.86
MBD1-215ENST00000586884 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
MBD1-215ENST00000586884 SIPA1L3O60292 1781 aaPredicted RBP20.44■□□□□ 0.86
MBD1-215ENST00000586884 SCN7AQ01118 1682 aa20.43■□□□□ 0.86
MBD1-215ENST00000586884 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
MBD1-215ENST00000586884 TBC1D9BQ66K14 1250 aa20.43■□□□□ 0.86
MBD1-215ENST00000586884 DNAJC5GQ8N7S2 189 aa20.43■□□□□ 0.86
MBD1-215ENST00000586884 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
MBD1-215ENST00000586884 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
MBD1-215ENST00000586884 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
MBD1-215ENST00000586884 NPM2Q86SE8 214 aaKnown RBP20.42■□□□□ 0.86
MBD1-215ENST00000586884 PHACTR3Q96KR7 559 aa20.42■□□□□ 0.86
MBD1-215ENST00000586884 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
MBD1-215ENST00000586884 BTBD11A6QL63 1104 aa20.41■□□□□ 0.86
MBD1-215ENST00000586884 PDE6BP35913 854 aa20.41■□□□□ 0.86
MBD1-215ENST00000586884 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
MBD1-215ENST00000586884 TBC1D2BQ9UPU7 963 aa20.41■□□□□ 0.86
MBD1-215ENST00000586884 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
MBD1-215ENST00000586884 SBF1O95248 1867 aa20.41■□□□□ 0.86
MBD1-215ENST00000586884 PRR5LQ6MZQ0 368 aa20.39■□□□□ 0.85
MBD1-215ENST00000586884 WDR90Q96KV7 1748 aa20.39■□□□□ 0.85
MBD1-215ENST00000586884 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
MBD1-215ENST00000586884 NFKBIEO00221 500 aa20.38■□□□□ 0.85
MBD1-215ENST00000586884 A1BGP04217 495 aa20.38■□□□□ 0.85
MBD1-215ENST00000586884 PRELPP51888 382 aa20.38■□□□□ 0.85
MBD1-215ENST00000586884 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
MBD1-215ENST00000586884 SETDB2Q96T68 719 aa20.38■□□□□ 0.85
MBD1-215ENST00000586884 KCNQ3O43525 872 aa20.37■□□□□ 0.85
MBD1-215ENST00000586884 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
MBD1-215ENST00000586884 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
MBD1-215ENST00000586884 ZNF622Q969S3 477 aaKnown RBP eCLIP20.37■□□□□ 0.852e-6■■■□□ 19.2
MBD1-215ENST00000586884 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
MBD1-215ENST00000586884 PPP2R1AP30153 589 aa20.36■□□□□ 0.85
MBD1-215ENST00000586884 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
MBD1-215ENST00000586884 CNBD1Q8NA66 436 aa20.36■□□□□ 0.85
MBD1-215ENST00000586884 VEGFAP15692 232 aaPredicted RBP20.35■□□□□ 0.85
MBD1-215ENST00000586884 DZIP3Q86Y13 1208 aaKnown RBP20.35■□□□□ 0.85
MBD1-215ENST00000586884 ANKRD31Q8N7Z5 1873 aa20.35■□□□□ 0.85
MBD1-215ENST00000586884 NPHP1O15259 732 aa20.34■□□□□ 0.85
MBD1-215ENST00000586884 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
MBD1-215ENST00000586884 ST5P78524 1137 aa20.34■□□□□ 0.85
MBD1-215ENST00000586884 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
MBD1-215ENST00000586884 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
MBD1-215ENST00000586884 TIAM2Q8IVF5 1701 aa20.33■□□□□ 0.85
MBD1-215ENST00000586884 C21orf2O43822 256 aa20.33■□□□□ 0.85
MBD1-215ENST00000586884 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
MBD1-215ENST00000586884 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
MBD1-215ENST00000586884 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
MBD1-215ENST00000586884 LTBP3Q9NS15 1303 aa20.32■□□□□ 0.84
MBD1-215ENST00000586884 BCORQ6W2J9 1755 aa20.32■□□□□ 0.84
MBD1-215ENST00000586884 HTATSF1O43719 755 aaKnown RBP20.32■□□□□ 0.84
MBD1-215ENST00000586884 HTRA3P83110 453 aa20.32■□□□□ 0.84
MBD1-215ENST00000586884 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms