RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 COL15A1P39059 1388 aa22.63■■□□□ 1.21
TRIM47-203ENST00000586495 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
TRIM47-203ENST00000586495 FMNL2Q96PY5 1086 aa22.62■■□□□ 1.21
TRIM47-203ENST00000586495 UBR2Q8IWV8 1755 aa22.62■■□□□ 1.21
TRIM47-203ENST00000586495 HEG1Q9ULI3 1381 aa22.62■■□□□ 1.21
TRIM47-203ENST00000586495 BTBD11A6QL63 1104 aa22.61■■□□□ 1.21
TRIM47-203ENST00000586495 NEFMP07197 916 aa22.61■■□□□ 1.21
TRIM47-203ENST00000586495 TM4SF1P30408 202 aa22.61■■□□□ 1.21
TRIM47-203ENST00000586495 BCS1LQ9Y276 419 aa22.61■■□□□ 1.21
TRIM47-203ENST00000586495 GIGYF1O75420 1035 aaPredicted RBP22.6■■□□□ 1.21
TRIM47-203ENST00000586495 DPEP1P16444 411 aa22.6■■□□□ 1.21
TRIM47-203ENST00000586495 DDR1Q08345 913 aa22.6■■□□□ 1.21
TRIM47-203ENST00000586495 A0A087WZG4 1122 aa22.59■■□□□ 1.21
TRIM47-203ENST00000586495 POLRMTO00411 1230 aaKnown RBP22.59■■□□□ 1.21
TRIM47-203ENST00000586495 HTATSF1O43719 755 aaKnown RBP22.58■■□□□ 1.21
TRIM47-203ENST00000586495 C1QTNF8P60827 252 aa22.58■■□□□ 1.21
TRIM47-203ENST00000586495 N4BP2Q86UW6 1770 aaPredicted RBP22.58■■□□□ 1.2
TRIM47-203ENST00000586495 EIF5P55010 431 aaKnown RBP22.57■■□□□ 1.2
TRIM47-203ENST00000586495 NPM2Q86SE8 214 aaKnown RBP22.57■■□□□ 1.2
TRIM47-203ENST00000586495 SIPA1L3O60292 1781 aaPredicted RBP22.57■■□□□ 1.2
TRIM47-203ENST00000586495 KIAA1551Q9HCM1 1747 aa22.57■■□□□ 1.2
TRIM47-203ENST00000586495 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
TRIM47-203ENST00000586495 NFIXQ14938 502 aa22.56■■□□□ 1.2
TRIM47-203ENST00000586495 MCM10Q7L590 875 aa22.56■■□□□ 1.2
TRIM47-203ENST00000586495 PIM2Q9P1W9 311 aa22.56■■□□□ 1.2
TRIM47-203ENST00000586495 ADCY9O60503 1353 aa22.54■■□□□ 1.2
TRIM47-203ENST00000586495 KCNQ3O43525 872 aa22.54■■□□□ 1.2
TRIM47-203ENST00000586495 KCNA3P22001 575 aa22.54■■□□□ 1.2
TRIM47-203ENST00000586495 IL6STP40189 918 aaPredicted RBP22.54■■□□□ 1.2
TRIM47-203ENST00000586495 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
TRIM47-203ENST00000586495 GPBP1L1Q9HC44 474 aaPredicted RBP22.54■■□□□ 1.2
TRIM47-203ENST00000586495 ARHGAP27Q6ZUM4 889 aa22.53■■□□□ 1.2
TRIM47-203ENST00000586495 PNNQ9H307 717 aaKnown RBP22.53■■□□□ 1.2
TRIM47-203ENST00000586495 ZNF330Q9Y3S2 320 aaPredicted RBP22.53■■□□□ 1.2
TRIM47-203ENST00000586495 SERPINB2P05120 415 aa22.52■■□□□ 1.2
TRIM47-203ENST00000586495 DCTN1Q14203 1278 aa22.51■■□□□ 1.19
TRIM47-203ENST00000586495 RALBP1Q15311 655 aa22.51■■□□□ 1.19
TRIM47-203ENST00000586495 DALRD3Q5D0E6 543 aaKnown RBP22.51■■□□□ 1.19
TRIM47-203ENST00000586495 A1BGP04217 495 aa22.5■■□□□ 1.19
TRIM47-203ENST00000586495 SNRPA1P09661 255 aaKnown RBP22.5■■□□□ 1.19
TRIM47-203ENST00000586495 TAF7Q15545 349 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-203ENST00000586495 USP16Q9Y5T5 823 aa22.5■■□□□ 1.19
TRIM47-203ENST00000586495 CHRNA5P30532 468 aa22.49■■□□□ 1.19
TRIM47-203ENST00000586495 BICDL1Q6ZP65 573 aa22.49■■□□□ 1.19
TRIM47-203ENST00000586495 TBC1D2BQ9UPU7 963 aa22.49■■□□□ 1.19
TRIM47-203ENST00000586495 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
TRIM47-203ENST00000586495 ZNF526Q8TF50 670 aaPredicted RBP22.48■■□□□ 1.19
TRIM47-203ENST00000586495 PLEKHF1Q96S99 279 aa22.48■■□□□ 1.19
TRIM47-203ENST00000586495 SENP3-EIF4A1A0A087X0R7 540 aa22.47■■□□□ 1.19
TRIM47-203ENST00000586495 PNISRQ8TF01 805 aaKnown RBP22.47■■□□□ 1.19
TRIM47-203ENST00000586495 TBC1D9BQ66K14 1250 aa22.46■■□□□ 1.19
TRIM47-203ENST00000586495 MAPK8IP3Q9UPT6 1336 aa22.46■■□□□ 1.19
TRIM47-203ENST00000586495 NRXN2Q9P2S2 1712 aa22.45■■□□□ 1.19
TRIM47-203ENST00000586495 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.19
TRIM47-203ENST00000586495 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
TRIM47-203ENST00000586495 NFE2L2Q16236 605 aa22.45■■□□□ 1.18
TRIM47-203ENST00000586495 DZIP3Q86Y13 1208 aaKnown RBP22.45■■□□□ 1.18
TRIM47-203ENST00000586495 ARFGEF1Q9Y6D6 1849 aa22.45■■□□□ 1.18
TRIM47-203ENST00000586495 PRAMEF22A3QJZ6 481 aa22.44■■□□□ 1.18
TRIM47-203ENST00000586495 H0YIN7 160 aa22.43■■□□□ 1.18
TRIM47-203ENST00000586495 CAMTA2O94983 1202 aa22.43■■□□□ 1.18
TRIM47-203ENST00000586495 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
TRIM47-203ENST00000586495 PDZRN3Q9UPQ7 1066 aa22.43■■□□□ 1.18
TRIM47-203ENST00000586495 CARMIL3Q8ND23 1372 aa22.42■■□□□ 1.18
TRIM47-203ENST00000586495 C2CD5Q86YS7 1000 aa22.42■■□□□ 1.18
TRIM47-203ENST00000586495 NPHP1O15259 732 aa22.41■■□□□ 1.18
TRIM47-203ENST00000586495 C9orf131Q5VYM1 1079 aa22.41■■□□□ 1.18
TRIM47-203ENST00000586495 CLEC4GQ6UXB4 293 aa22.41■■□□□ 1.18
TRIM47-203ENST00000586495 TTLL6Q8N841 843 aa22.41■■□□□ 1.18
TRIM47-203ENST00000586495 MIS18AQ9NYP9 233 aa22.41■■□□□ 1.18
TRIM47-203ENST00000586495 SCN7AQ01118 1682 aa22.41■■□□□ 1.18
TRIM47-203ENST00000586495 PDE6BP35913 854 aa22.4■■□□□ 1.18
TRIM47-203ENST00000586495 PIP4K2AP48426 406 aaPredicted RBP22.4■■□□□ 1.18
TRIM47-203ENST00000586495 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
TRIM47-203ENST00000586495 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
TRIM47-203ENST00000586495 DLG5Q8TDM6 1919 aa22.39■■□□□ 1.18
TRIM47-203ENST00000586495 MYBBP1AQ9BQG0 1328 aaKnown RBP22.39■■□□□ 1.18
TRIM47-203ENST00000586495 PRR5LQ6MZQ0 368 aa22.39■■□□□ 1.17
TRIM47-203ENST00000586495 CNBD1Q8NA66 436 aa22.38■■□□□ 1.17
TRIM47-203ENST00000586495 RGL2O15211 777 aa22.37■■□□□ 1.17
TRIM47-203ENST00000586495 ST5P78524 1137 aa22.37■■□□□ 1.17
TRIM47-203ENST00000586495 NBPF26B4DH59 902 aa22.36■■□□□ 1.17
TRIM47-203ENST00000586495 NBPF10Q6P3W6 841 aaKnown RBP22.36■■□□□ 1.17
TRIM47-203ENST00000586495 NBPF15Q8N660 670 aa22.36■■□□□ 1.17
TRIM47-203ENST00000586495 THUMPD2Q9BTF0 503 aaKnown RBP22.36■■□□□ 1.17
TRIM47-203ENST00000586495 RNF181Q9P0P0 153 aa22.36■■□□□ 1.17
TRIM47-203ENST00000586495 KIF3CO14782 793 aa22.35■■□□□ 1.17
TRIM47-203ENST00000586495 RIPK4P57078 832 aa22.35■■□□□ 1.17
TRIM47-203ENST00000586495 EIF4A1P60842 406 aaKnown RBP22.35■■□□□ 1.17
TRIM47-203ENST00000586495 ZNF622Q969S3 477 aaKnown RBP eCLIP22.35■■□□□ 1.17
TRIM47-203ENST00000586495 LMOD3Q0VAK6 560 aa22.34■■□□□ 1.17
TRIM47-203ENST00000586495 CCDC24Q8N4L8 307 aa22.34■■□□□ 1.17
TRIM47-203ENST00000586495 BCORQ6W2J9 1755 aa22.34■■□□□ 1.17
TRIM47-203ENST00000586495 DLEC1Q9Y238 1755 aa22.34■■□□□ 1.17
TRIM47-203ENST00000586495 NBPF5PQ86XG9 351 aaPredicted RBP22.33■■□□□ 1.17
TRIM47-203ENST00000586495 KDM3BQ7LBC6 1761 aa22.31■■□□□ 1.16
TRIM47-203ENST00000586495 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
TRIM47-203ENST00000586495 RASSF7Q02833 373 aa22.31■■□□□ 1.16
TRIM47-203ENST00000586495 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
TRIM47-203ENST00000586495 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms