RNA–Protein interactions for RNA: ENST00000586368.1

PALM3-202, Transcript of paralemmin 3, humanhuman

TSL 3

Gene PALM3, Length 469 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-202ENST00000586368 PIM2Q9P1W9 311 aa13.48□□□□□ -0.25
PALM3-202ENST00000586368 COL15A1P39059 1388 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
PALM3-202ENST00000586368 STARD3NLO95772 234 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 KCNA3P22001 575 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 TM4SF1P30408 202 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 CHRNA5P30532 468 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 PRKAR2BP31323 418 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 NARFQ9UHQ1 456 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
PALM3-202ENST00000586368 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
PALM3-202ENST00000586368 ZNF790Q6PG37 636 aa13.46□□□□□ -0.25
PALM3-202ENST00000586368 NUDCQ9Y266 331 aa13.46□□□□□ -0.25
PALM3-202ENST00000586368 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
PALM3-202ENST00000586368 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
PALM3-202ENST00000586368 PPP2R1AP30153 589 aa13.45□□□□□ -0.26
PALM3-202ENST00000586368 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
PALM3-202ENST00000586368 NFIXQ14938 502 aa13.45□□□□□ -0.26
PALM3-202ENST00000586368 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
PALM3-202ENST00000586368 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
PALM3-202ENST00000586368 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
PALM3-202ENST00000586368 UBR2Q8IWV8 1755 aa13.44□□□□□ -0.26
PALM3-202ENST00000586368 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
PALM3-202ENST00000586368 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 KCNQ3O43525 872 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 SERPINB2P05120 415 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 BCL2L12Q9HB09 334 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 HEG1Q9ULI3 1381 aa13.43□□□□□ -0.26
PALM3-202ENST00000586368 A0A087WZG4 1122 aa13.42□□□□□ -0.26
PALM3-202ENST00000586368 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
PALM3-202ENST00000586368 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
PALM3-202ENST00000586368 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
PALM3-202ENST00000586368 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
PALM3-202ENST00000586368 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
PALM3-202ENST00000586368 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
PALM3-202ENST00000586368 KIF3CO14782 793 aa13.41□□□□□ -0.26
PALM3-202ENST00000586368 A1BGP04217 495 aa13.41□□□□□ -0.26
PALM3-202ENST00000586368 MCM10Q7L590 875 aa13.41□□□□□ -0.26
PALM3-202ENST00000586368 CEMIPQ8WUJ3 1361 aa13.41□□□□□ -0.26
PALM3-202ENST00000586368 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
PALM3-202ENST00000586368 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
PALM3-202ENST00000586368 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
PALM3-202ENST00000586368 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
PALM3-202ENST00000586368 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
PALM3-202ENST00000586368 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
PALM3-202ENST00000586368 NMRK2Q9NPI5 230 aa13.39□□□□□ -0.27
PALM3-202ENST00000586368 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
PALM3-202ENST00000586368 H0YIN7 160 aa13.38□□□□□ -0.27
PALM3-202ENST00000586368 NPHP1O15259 732 aa13.38□□□□□ -0.27
PALM3-202ENST00000586368 HSPA6P17066 643 aa13.38□□□□□ -0.27
PALM3-202ENST00000586368 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
PALM3-202ENST00000586368 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
PALM3-202ENST00000586368 CARMIL3Q8ND23 1372 aa13.37□□□□□ -0.27
PALM3-202ENST00000586368 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
PALM3-202ENST00000586368 RASSF7Q02833 373 aa13.37□□□□□ -0.27
PALM3-202ENST00000586368 TTLL6Q8N841 843 aa13.37□□□□□ -0.27
PALM3-202ENST00000586368 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
PALM3-202ENST00000586368 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
PALM3-202ENST00000586368 NEFMP07197 916 aa13.36□□□□□ -0.27
PALM3-202ENST00000586368 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
PALM3-202ENST00000586368 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.27
PALM3-202ENST00000586368 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
PALM3-202ENST00000586368 PCNTO95613 3336 aa13.36□□□□□ -0.27
PALM3-202ENST00000586368 TOMM70O94826 608 aa13.35□□□□□ -0.27
PALM3-202ENST00000586368 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
PALM3-202ENST00000586368 PRR5LQ6MZQ0 368 aa13.35□□□□□ -0.27
PALM3-202ENST00000586368 DZIP3Q86Y13 1208 aaKnown RBP13.35□□□□□ -0.27
PALM3-202ENST00000586368 C16orf71Q8IYS4 520 aaPredicted RBP13.35□□□□□ -0.27
PALM3-202ENST00000586368 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
PALM3-202ENST00000586368 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
PALM3-202ENST00000586368 SBF1O95248 1867 aa13.34□□□□□ -0.27
PALM3-202ENST00000586368 HTATSF1O43719 755 aaKnown RBP13.34□□□□□ -0.27
PALM3-202ENST00000586368 PDE6BP35913 854 aa13.34□□□□□ -0.27
PALM3-202ENST00000586368 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
PALM3-202ENST00000586368 CNBD1Q8NA66 436 aa13.34□□□□□ -0.27
PALM3-202ENST00000586368 BRIP1Q9BX63 1249 aa13.34□□□□□ -0.27
PALM3-202ENST00000586368 KDM2BQ8NHM5 1336 aa13.34□□□□□ -0.27
PALM3-202ENST00000586368 SCN7AQ01118 1682 aa13.34□□□□□ -0.27
PALM3-202ENST00000586368 LMNB1P20700 586 aa13.33□□□□□ -0.28
PALM3-202ENST00000586368 ST5P78524 1137 aa13.33□□□□□ -0.28
PALM3-202ENST00000586368 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
PALM3-202ENST00000586368 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
PALM3-202ENST00000586368 ANKRD31Q8N7Z5 1873 aa13.31□□□□□ -0.28
PALM3-202ENST00000586368 C21orf2O43822 256 aa13.31□□□□□ -0.28
PALM3-202ENST00000586368 PRELPP51888 382 aa13.31□□□□□ -0.28
PALM3-202ENST00000586368 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
PALM3-202ENST00000586368 PDZRN3Q9UPQ7 1066 aa13.31□□□□□ -0.28
PALM3-202ENST00000586368 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
PALM3-202ENST00000586368 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
PALM3-202ENST00000586368 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
PALM3-202ENST00000586368 NFKBIEO00221 500 aa13.3□□□□□ -0.28
PALM3-202ENST00000586368 APLP1P51693 650 aa13.3□□□□□ -0.28
PALM3-202ENST00000586368 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
PALM3-202ENST00000586368 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
PALM3-202ENST00000586368 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
PALM3-202ENST00000586368 RBM46Q8TBY0 533 aaKnown RBP13.3□□□□□ -0.28
PALM3-202ENST00000586368 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms