RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, human

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4A-205	ENST00000586275	CANX	P27824	592 aa	Known RBP	28.1	■■■□□ 2.09
PDE4A-205	ENST00000586275	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.1	■■■□□ 2.09
PDE4A-205	ENST00000586275	HEG1	Q9ULI3	1381 aa		28.1	■■■□□ 2.09
PDE4A-205	ENST00000586275	POLRMT	O00411	1230 aa	Known RBP	28.09	■■■□□ 2.09
PDE4A-205	ENST00000586275	BCS1L	Q9Y276	419 aa		28.09	■■■□□ 2.09
PDE4A-205	ENST00000586275	KIF13B	Q9NQT8	1826 aa		28.08	■■■□□ 2.09
PDE4A-205	ENST00000586275	BTBD11	A6QL63	1104 aa		28.08	■■■□□ 2.09
PDE4A-205	ENST00000586275	GIGYF1	O75420	1035 aa	Predicted RBP	28.08	■■■□□ 2.09
PDE4A-205	ENST00000586275	C1QTNF8	P60827	252 aa		28.08	■■■□□ 2.09
PDE4A-205	ENST00000586275	FMNL2	Q96PY5	1086 aa		28.08	■■■□□ 2.09
PDE4A-205	ENST00000586275	RTF1	Q92541	710 aa	Known RBP	28.07	■■■□□ 2.08
PDE4A-205	ENST00000586275	ATP10D	Q9P241	1426 aa		28.07	■■■□□ 2.08
PDE4A-205	ENST00000586275	UBR2	Q8IWV8	1755 aa		28.06	■■■□□ 2.08
PDE4A-205	ENST00000586275	EIF5	P55010	431 aa	Known RBP	28.06	■■■□□ 2.08
PDE4A-205	ENST00000586275	VIRMA	Q69YN4	1812 aa	Known RBP	28.06	■■■□□ 2.08
PDE4A-205	ENST00000586275	ADCY9	O60503	1353 aa		28.05	■■■□□ 2.08
PDE4A-205	ENST00000586275	KCNA3	P22001	575 aa		28.05	■■■□□ 2.08
PDE4A-205	ENST00000586275	BCL2L12	Q9HB09	334 aa		28.05	■■■□□ 2.08
PDE4A-205	ENST00000586275	KIAA1551	Q9HCM1	1747 aa		28.04	■■■□□ 2.08
PDE4A-205	ENST00000586275		A0A087WZG4	1122 aa		28.04	■■■□□ 2.08
PDE4A-205	ENST00000586275	NFIX	Q14938	502 aa		28.04	■■■□□ 2.08
PDE4A-205	ENST00000586275	KCNQ3	O43525	872 aa		28.03	■■■□□ 2.08
PDE4A-205	ENST00000586275	HTATSF1	O43719	755 aa	Known RBP	28.03	■■■□□ 2.08
PDE4A-205	ENST00000586275	MCM10	Q7L590	875 aa		28.03	■■■□□ 2.08
PDE4A-205	ENST00000586275	PIM2	Q9P1W9	311 aa		28.03	■■■□□ 2.08
PDE4A-205	ENST00000586275	ARHGAP27	Q6ZUM4	889 aa		28	■■■□□ 2.07
PDE4A-205	ENST00000586275	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28	■■■□□ 2.07
PDE4A-205	ENST00000586275	SIPA1L3	O60292	1781 aa	Predicted RBP	28	■■■□□ 2.07
PDE4A-205	ENST00000586275	N4BP2	Q86UW6	1770 aa	Predicted RBP	28	■■■□□ 2.07
PDE4A-205	ENST00000586275	IL6ST	P40189	918 aa	Predicted RBP	27.99	■■■□□ 2.07
PDE4A-205	ENST00000586275	A1BG	P04217	495 aa		27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	SERPINB2	P05120	415 aa		27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	NEFM	P07197	916 aa		27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	CHRNA5	P30532	468 aa		27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	DCTN1	Q14203	1278 aa		27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	DALRD3	Q5D0E6	543 aa	Known RBP	27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.98	■■■□□ 2.07
PDE4A-205	ENST00000586275	NPM2	Q86SE8	214 aa	Known RBP	27.96	■■■□□ 2.07
PDE4A-205	ENST00000586275	ZNF526	Q8TF50	670 aa	Predicted RBP	27.96	■■■□□ 2.07
PDE4A-205	ENST00000586275	TBC1D2B	Q9UPU7	963 aa		27.96	■■■□□ 2.07
PDE4A-205	ENST00000586275	USP16	Q9Y5T5	823 aa		27.95	■■■□□ 2.06
PDE4A-205	ENST00000586275	SNRPA1	P09661	255 aa	Known RBP	27.94	■■■□□ 2.06
PDE4A-205	ENST00000586275	TAF7	Q15545	349 aa	Predicted RBP	27.94	■■■□□ 2.06
PDE4A-205	ENST00000586275	BICDL1	Q6ZP65	573 aa		27.94	■■■□□ 2.06
PDE4A-205	ENST00000586275	PLEKHF1	Q96S99	279 aa		27.93	■■■□□ 2.06
PDE4A-205	ENST00000586275	SENP3-EIF4A1	A0A087X0R7	540 aa		27.92	■■■□□ 2.06
PDE4A-205	ENST00000586275	RALBP1	Q15311	655 aa		27.92	■■■□□ 2.06
PDE4A-205	ENST00000586275	TBC1D9B	Q66K14	1250 aa		27.92	■■■□□ 2.06
PDE4A-205	ENST00000586275	PRAMEF22	A3QJZ6	481 aa		27.91	■■■□□ 2.06
PDE4A-205	ENST00000586275	PNN	Q9H307	717 aa	Known RBP	27.91	■■■□□ 2.06
PDE4A-205	ENST00000586275	CAMTA2	O94983	1202 aa		27.88	■■■□□ 2.05
PDE4A-205	ENST00000586275	NFE2L2	Q16236	605 aa		27.88	■■■□□ 2.05
PDE4A-205	ENST00000586275	DZIP3	Q86Y13	1208 aa	Known RBP	27.88	■■■□□ 2.05
PDE4A-205	ENST00000586275	MIS18A	Q9NYP9	233 aa		27.88	■■■□□ 2.05
PDE4A-205	ENST00000586275	BRCA1	P38398	1863 aa	Known RBP	27.87	■■■□□ 2.05
PDE4A-205	ENST00000586275	NRXN2	Q9P2S2	1712 aa		27.87	■■■□□ 2.05
PDE4A-205	ENST00000586275	PIP4K2A	P48426	406 aa	Predicted RBP	27.87	■■■□□ 2.05
PDE4A-205	ENST00000586275	DDX10	Q13206	875 aa	Known RBP	27.87	■■■□□ 2.05
PDE4A-205	ENST00000586275	C2CD5	Q86YS7	1000 aa		27.86	■■■□□ 2.05
PDE4A-205	ENST00000586275	PNISR	Q8TF01	805 aa	Known RBP	27.86	■■■□□ 2.05
PDE4A-205	ENST00000586275	MAPK8IP3	Q9UPT6	1336 aa		27.86	■■■□□ 2.05
PDE4A-205	ENST00000586275	CARMIL3	Q8ND23	1372 aa		27.86	■■■□□ 2.05
PDE4A-205	ENST00000586275		H0YIN7	160 aa		27.85	■■■□□ 2.05
PDE4A-205	ENST00000586275	C9orf131	Q5VYM1	1079 aa		27.85	■■■□□ 2.05
PDE4A-205	ENST00000586275	SETDB2	Q96T68	719 aa		27.85	■■■□□ 2.05
PDE4A-205	ENST00000586275	PRR5L	Q6MZQ0	368 aa		27.83	■■■□□ 2.05
PDE4A-205	ENST00000586275	TTLL6	Q8N841	843 aa		27.83	■■■□□ 2.05
PDE4A-205	ENST00000586275	BRIP1	Q9BX63	1249 aa		27.83	■■■□□ 2.05
PDE4A-205	ENST00000586275	SCN7A	Q01118	1682 aa		27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	NBPF26	B4DH59	902 aa		27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	NBPF10	Q6P3W6	841 aa	Known RBP	27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	CLEC4G	Q6UXB4	293 aa		27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	NBPF15	Q8N660	670 aa		27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	PDZRN3	Q9UPQ7	1066 aa		27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	AFDN	P55196	1824 aa	Known RBP	27.82	■■■□□ 2.04
PDE4A-205	ENST00000586275	ARFGEF1	Q9Y6D6	1849 aa		27.81	■■■□□ 2.04
PDE4A-205	ENST00000586275	KIF3C	O14782	793 aa		27.81	■■■□□ 2.04
PDE4A-205	ENST00000586275	PDE6B	P35913	854 aa		27.81	■■■□□ 2.04
PDE4A-205	ENST00000586275	THUMPD2	Q9BTF0	503 aa	Known RBP	27.8	■■■□□ 2.04
PDE4A-205	ENST00000586275	CCDC24	Q8N4L8	307 aa		27.79	■■■□□ 2.04
PDE4A-205	ENST00000586275	CNBD1	Q8NA66	436 aa		27.79	■■■□□ 2.04
PDE4A-205	ENST00000586275	RNF181	Q9P0P0	153 aa		27.79	■■■□□ 2.04
PDE4A-205	ENST00000586275	ZNF652	Q9Y2D9	606 aa		27.79	■■■□□ 2.04
PDE4A-205	ENST00000586275	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.78	■■■□□ 2.04
PDE4A-205	ENST00000586275	NPHP1	O15259	732 aa		27.78	■■■□□ 2.04
PDE4A-205	ENST00000586275	RGL2	O15211	777 aa		27.77	■■■□□ 2.04
PDE4A-205	ENST00000586275	EIF4A1	P60842	406 aa	Known RBP	27.77	■■■□□ 2.04
PDE4A-205	ENST00000586275	ST5	P78524	1137 aa		27.76	■■■□□ 2.03
PDE4A-205	ENST00000586275	ZNF622	Q969S3	477 aa	Known RBP eCLIP	27.76	■■■□□ 2.03	2e-6	■□□□□ 8.4
PDE4A-205	ENST00000586275	RIPK4	P57078	832 aa		27.74	■■■□□ 2.03
PDE4A-205	ENST00000586275	RASSF7	Q02833	373 aa		27.74	■■■□□ 2.03
PDE4A-205	ENST00000586275	NBPF5P	Q86XG9	351 aa	Predicted RBP	27.74	■■■□□ 2.03
PDE4A-205	ENST00000586275	NMRK2	Q9NPI5	230 aa		27.73	■■■□□ 2.03
PDE4A-205	ENST00000586275	NIP7	Q9Y221	180 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
PDE4A-205	ENST00000586275	LMNB1	P20700	586 aa		27.71	■■■□□ 2.03
PDE4A-205	ENST00000586275	KDM2B	Q8NHM5	1336 aa		27.7	■■■□□ 2.03
PDE4A-205	ENST00000586275	TMPO	P42166	694 aa	Known RBP	27.7	■■■□□ 2.02
PDE4A-205	ENST00000586275	TSPYL4	Q9UJ04	414 aa		27.7	■■■□□ 2.02
PDE4A-205	ENST00000586275	BCOR	Q6W2J9	1755 aa		27.7	■■■□□ 2.02
PDE4A-205	ENST00000586275	DLEC1	Q9Y238	1755 aa		27.7	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms