RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NFIXQ14938 502 aa15.79■□□□□ 0.12
LIG3-207ENST00000586119 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
LIG3-207ENST00000586119 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
LIG3-207ENST00000586119 ZPR1O75312 459 aa15.78■□□□□ 0.12
LIG3-207ENST00000586119 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
LIG3-207ENST00000586119 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
LIG3-207ENST00000586119 TOMM70O94826 608 aa15.77■□□□□ 0.12
LIG3-207ENST00000586119 CANXP27824 592 aaKnown RBP15.77■□□□□ 0.12
LIG3-207ENST00000586119 HTRA3P83110 453 aa15.76■□□□□ 0.11
LIG3-207ENST00000586119 NARFQ9UHQ1 456 aa15.76■□□□□ 0.11
LIG3-207ENST00000586119 PRELPP51888 382 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 RASSF7Q02833 373 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 DNAJC5GQ8N7S2 189 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 IL17REQ8NFR9 667 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 RRAGCQ9HB90 399 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 RNF181Q9P0P0 153 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 MRC1P22897 1456 aa15.75■□□□□ 0.11
LIG3-207ENST00000586119 SERPINB2P05120 415 aa15.74■□□□□ 0.11
LIG3-207ENST00000586119 BICDL1Q6ZP65 573 aa15.74■□□□□ 0.11
LIG3-207ENST00000586119 COL15A1P39059 1388 aa15.74■□□□□ 0.11
LIG3-207ENST00000586119 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
LIG3-207ENST00000586119 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
LIG3-207ENST00000586119 CCDC24Q8N4L8 307 aa15.73■□□□□ 0.11
LIG3-207ENST00000586119 KCNQ3O43525 872 aa15.72■□□□□ 0.11
LIG3-207ENST00000586119 APLP1P51693 650 aa15.72■□□□□ 0.11
LIG3-207ENST00000586119 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
LIG3-207ENST00000586119 CARMIL3Q8ND23 1372 aa15.72■□□□□ 0.11
LIG3-207ENST00000586119 UBR2Q8IWV8 1755 aa15.72■□□□□ 0.11
LIG3-207ENST00000586119 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.11
LIG3-207ENST00000586119 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
LIG3-207ENST00000586119 VSIG10Q8N0Z9 540 aa15.71■□□□□ 0.11
LIG3-207ENST00000586119 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.1
LIG3-207ENST00000586119 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
LIG3-207ENST00000586119 C2CD5Q86YS7 1000 aa15.7■□□□□ 0.1
LIG3-207ENST00000586119 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
LIG3-207ENST00000586119 TBC1D2BQ9UPU7 963 aa15.7■□□□□ 0.1
LIG3-207ENST00000586119 A1BGP04217 495 aa15.69■□□□□ 0.1
LIG3-207ENST00000586119 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
LIG3-207ENST00000586119 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
LIG3-207ENST00000586119 ANKRD31Q8N7Z5 1873 aa15.68■□□□□ 0.1
LIG3-207ENST00000586119 GNAT3A8MTJ3 354 aa15.68■□□□□ 0.1
LIG3-207ENST00000586119 ZNF790Q6PG37 636 aa15.68■□□□□ 0.1
LIG3-207ENST00000586119 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
LIG3-207ENST00000586119 TTC5Q8N0Z6 440 aa15.68■□□□□ 0.1
LIG3-207ENST00000586119 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
LIG3-207ENST00000586119 SIPA1L3O60292 1781 aaPredicted RBP15.67■□□□□ 0.1
LIG3-207ENST00000586119 HEG1Q9ULI3 1381 aa15.67■□□□□ 0.1
LIG3-207ENST00000586119 STARD3NLO95772 234 aa15.67■□□□□ 0.1
LIG3-207ENST00000586119 PIP4K2AP48426 406 aaPredicted RBP15.67■□□□□ 0.1
LIG3-207ENST00000586119 TEFQ10587 303 aa15.67■□□□□ 0.1
LIG3-207ENST00000586119 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
LIG3-207ENST00000586119 DLEC1Q9Y238 1755 aa15.67■□□□□ 0.1
LIG3-207ENST00000586119 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
LIG3-207ENST00000586119 WDR90Q96KV7 1748 aa15.66■□□□□ 0.1
LIG3-207ENST00000586119 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
LIG3-207ENST00000586119 NFKBIEO00221 500 aa15.66■□□□□ 0.1
LIG3-207ENST00000586119 GAS2L2Q8NHY3 880 aa15.66■□□□□ 0.1
LIG3-207ENST00000586119 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIG3-207ENST00000586119 H0YIN7 160 aa15.65■□□□□ 0.1
LIG3-207ENST00000586119 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
LIG3-207ENST00000586119 LMNB1P20700 586 aa15.64■□□□□ 0.09
LIG3-207ENST00000586119 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
LIG3-207ENST00000586119 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
LIG3-207ENST00000586119 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
LIG3-207ENST00000586119 NPC1L1Q9UHC9 1359 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 A0A087WZG4 1122 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 GLTPD2A6NH11 291 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 POTECB2RU33 542 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 C21orf2O43822 256 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 CAMTA2O94983 1202 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 FSTL1Q12841 308 aa15.63■□□□□ 0.09
LIG3-207ENST00000586119 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
LIG3-207ENST00000586119 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
LIG3-207ENST00000586119 DCTN1Q14203 1278 aa15.62■□□□□ 0.09
LIG3-207ENST00000586119 MCM10Q7L590 875 aa15.62■□□□□ 0.09
LIG3-207ENST00000586119 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
LIG3-207ENST00000586119 TNRC6CQ9HCJ0 1690 aaKnown RBP15.62■□□□□ 0.09
LIG3-207ENST00000586119 COL11A2P13942 1736 aaPredicted RBP15.62■□□□□ 0.09
LIG3-207ENST00000586119 CEMIPQ8WUJ3 1361 aa15.62■□□□□ 0.09
LIG3-207ENST00000586119 SLX4Q8IY92 1834 aa15.61■□□□□ 0.09
LIG3-207ENST00000586119 CACNA1SQ13698 1873 aa15.61■□□□□ 0.09
LIG3-207ENST00000586119 KLRG1Q96E93 195 aa15.61■□□□□ 0.09
LIG3-207ENST00000586119 BRIP1Q9BX63 1249 aa15.61■□□□□ 0.09
LIG3-207ENST00000586119 TEX13AQ9BXU3 409 aaPredicted RBP15.61■□□□□ 0.09
LIG3-207ENST00000586119 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
LIG3-207ENST00000586119 FER1L6Q2WGJ9 1857 aa15.59■□□□□ 0.09
LIG3-207ENST00000586119 VEGFAP15692 232 aaPredicted RBP15.59■□□□□ 0.09
LIG3-207ENST00000586119 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
LIG3-207ENST00000586119 PDE6BP35913 854 aa15.59■□□□□ 0.09
LIG3-207ENST00000586119 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
LIG3-207ENST00000586119 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
LIG3-207ENST00000586119 SETDB2Q96T68 719 aa15.59■□□□□ 0.09
LIG3-207ENST00000586119 TIAM2Q8IVF5 1701 aa15.59■□□□□ 0.09
LIG3-207ENST00000586119 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.09
LIG3-207ENST00000586119 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
LIG3-207ENST00000586119 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
LIG3-207ENST00000586119 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
LIG3-207ENST00000586119 NBPF26B4DH59 902 aa15.57■□□□□ 0.08
LIG3-207ENST00000586119 COL13A1Q5TAT6 717 aaPredicted RBP15.57■□□□□ 0.08
LIG3-207ENST00000586119 NBPF10Q6P3W6 841 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms