RNA–Protein interactions for RNA: ENST00000586074.1

PCSK4-204, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-204ENST00000586074 UBR2Q8IWV8 1755 aa25.64■■□□□ 1.7
PCSK4-204ENST00000586074 TM4SF1P30408 202 aa25.64■■□□□ 1.7
PCSK4-204ENST00000586074 NARFQ9UHQ1 456 aa25.63■■□□□ 1.69
PCSK4-204ENST00000586074 TTC5Q8N0Z6 440 aa25.62■■□□□ 1.69
PCSK4-204ENST00000586074 ZBTB1Q9Y2K1 713 aa25.62■■□□□ 1.69
PCSK4-204ENST00000586074 C9orf131Q5VYM1 1079 aa25.61■■□□□ 1.69
PCSK4-204ENST00000586074 U2SURPO15042 1029 aaKnown RBP25.6■■□□□ 1.69
PCSK4-204ENST00000586074 CHRNA5P30532 468 aa25.6■■□□□ 1.69
PCSK4-204ENST00000586074 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
PCSK4-204ENST00000586074 TOMM70O94826 608 aa25.59■■□□□ 1.69
PCSK4-204ENST00000586074 STARD3NLO95772 234 aa25.59■■□□□ 1.69
PCSK4-204ENST00000586074 NRXN2Q9P2S2 1712 aa25.58■■□□□ 1.69
PCSK4-204ENST00000586074 TEFQ10587 303 aa25.58■■□□□ 1.69
PCSK4-204ENST00000586074 NFIXQ14938 502 aa25.58■■□□□ 1.69
PCSK4-204ENST00000586074 GNAT3A8MTJ3 354 aa25.57■■□□□ 1.68
PCSK4-204ENST00000586074 CNGB1Q14028 1251 aaPredicted RBP25.56■■□□□ 1.68
PCSK4-204ENST00000586074 NMRK2Q9NPI5 230 aa25.56■■□□□ 1.68
PCSK4-204ENST00000586074 RNF181Q9P0P0 153 aa25.56■■□□□ 1.68
PCSK4-204ENST00000586074 A0A087WZG4 1122 aa25.55■■□□□ 1.68
PCSK4-204ENST00000586074 CANXP27824 592 aaKnown RBP25.55■■□□□ 1.68
PCSK4-204ENST00000586074 APLP1P51693 650 aa25.55■■□□□ 1.68
PCSK4-204ENST00000586074 AFDNP55196 1824 aaKnown RBP25.55■■□□□ 1.68
PCSK4-204ENST00000586074 KDM2BQ8NHM5 1336 aa25.55■■□□□ 1.68
PCSK4-204ENST00000586074 BCL2L12Q9HB09 334 aa25.54■■□□□ 1.68
PCSK4-204ENST00000586074 HEG1Q9ULI3 1381 aa25.54■■□□□ 1.68
PCSK4-204ENST00000586074 SERPINB2P05120 415 aa25.53■■□□□ 1.68
PCSK4-204ENST00000586074 ZNF790Q6PG37 636 aa25.53■■□□□ 1.68
PCSK4-204ENST00000586074 C16orf71Q8IYS4 520 aaPredicted RBP25.53■■□□□ 1.68
PCSK4-204ENST00000586074 CFAP53Q96M91 514 aa25.53■■□□□ 1.68
PCSK4-204ENST00000586074 TEX13AQ9BXU3 409 aaPredicted RBP25.53■■□□□ 1.68
PCSK4-204ENST00000586074 DLEC1Q9Y238 1755 aa25.53■■□□□ 1.68
PCSK4-204ENST00000586074 SCN7AQ01118 1682 aa25.52■■□□□ 1.68
PCSK4-204ENST00000586074 SIPA1L3O60292 1781 aaPredicted RBP25.52■■□□□ 1.68
PCSK4-204ENST00000586074 EIF5P55010 431 aaKnown RBP25.52■■□□□ 1.68
PCSK4-204ENST00000586074 ZNF496Q96IT1 587 aaPredicted RBP25.52■■□□□ 1.68
PCSK4-204ENST00000586074 IL17REQ8NFR9 667 aa25.51■■□□□ 1.67
PCSK4-204ENST00000586074 RBM46Q8TBY0 533 aaKnown RBP25.5■■□□□ 1.67
PCSK4-204ENST00000586074 ZC3H4Q9UPT8 1303 aaKnown RBP25.5■■□□□ 1.67
PCSK4-204ENST00000586074 TNRC6CQ9HCJ0 1690 aaKnown RBP25.49■■□□□ 1.67
PCSK4-204ENST00000586074 CEMIPQ8WUJ3 1361 aa25.49■■□□□ 1.67
PCSK4-204ENST00000586074 FMNL2Q96PY5 1086 aa25.49■■□□□ 1.67
PCSK4-204ENST00000586074 CARMIL3Q8ND23 1372 aa25.47■■□□□ 1.67
PCSK4-204ENST00000586074 PRKAR2BP31323 418 aa25.47■■□□□ 1.67
PCSK4-204ENST00000586074 BICDL1Q6ZP65 573 aa25.47■■□□□ 1.67
PCSK4-204ENST00000586074 NPM2Q86SE8 214 aaKnown RBP25.47■■□□□ 1.67
PCSK4-204ENST00000586074 C2CD5Q86YS7 1000 aa25.47■■□□□ 1.67
PCSK4-204ENST00000586074 TTLL6Q8N841 843 aa25.47■■□□□ 1.67
PCSK4-204ENST00000586074 ZNF330Q9Y3S2 320 aaPredicted RBP25.47■■□□□ 1.67
PCSK4-204ENST00000586074 H0YIN7 160 aa25.46■■□□□ 1.67
PCSK4-204ENST00000586074 IL6STP40189 918 aaPredicted RBP25.46■■□□□ 1.67
PCSK4-204ENST00000586074 RASSF7Q02833 373 aa25.46■■□□□ 1.67
PCSK4-204ENST00000586074 IFFO2Q5TF58 517 aa25.46■■□□□ 1.67
PCSK4-204ENST00000586074 NUDCQ9Y266 331 aa25.46■■□□□ 1.67
PCSK4-204ENST00000586074 SBF1O95248 1867 aa25.46■■□□□ 1.67
PCSK4-204ENST00000586074 RSPH6AQ9H0K4 717 aa25.45■■□□□ 1.66
PCSK4-204ENST00000586074 PDZRN3Q9UPQ7 1066 aa25.45■■□□□ 1.66
PCSK4-204ENST00000586074 LMNB1P20700 586 aa25.44■■□□□ 1.66
PCSK4-204ENST00000586074 FSTL1Q12841 308 aa25.44■■□□□ 1.66
PCSK4-204ENST00000586074 TBC1D9BQ66K14 1250 aa25.44■■□□□ 1.66
PCSK4-204ENST00000586074 BTBD11A6QL63 1104 aa25.43■■□□□ 1.66
PCSK4-204ENST00000586074 PHACTR3Q96KR7 559 aa25.42■■□□□ 1.66
PCSK4-204ENST00000586074 TBC1D2BQ9UPU7 963 aa25.42■■□□□ 1.66
PCSK4-204ENST00000586074 WDR90Q96KV7 1748 aa25.41■■□□□ 1.66
PCSK4-204ENST00000586074 PDE6BP35913 854 aa25.41■■□□□ 1.66
PCSK4-204ENST00000586074 BRIP1Q9BX63 1249 aa25.41■■□□□ 1.66
PCSK4-204ENST00000586074 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
PCSK4-204ENST00000586074 RRAGCQ9HB90 399 aa25.4■■□□□ 1.66
PCSK4-204ENST00000586074 TIAM2Q8IVF5 1701 aa25.4■■□□□ 1.66
PCSK4-204ENST00000586074 ANKRD31Q8N7Z5 1873 aa25.39■■□□□ 1.66
PCSK4-204ENST00000586074 A1BGP04217 495 aa25.39■■□□□ 1.66
PCSK4-204ENST00000586074 U2AF1L5P0DN76 240 aaPredicted RBP25.39■■□□□ 1.66
PCSK4-204ENST00000586074 U2AF1Q01081 240 aaKnown RBP eCLIP25.39■■□□□ 1.66
PCSK4-204ENST00000586074 PRR5LQ6MZQ0 368 aa25.39■■□□□ 1.66
PCSK4-204ENST00000586074 BCORQ6W2J9 1755 aa25.39■■□□□ 1.65
PCSK4-204ENST00000586074 NPHP1O15259 732 aa25.38■■□□□ 1.65
PCSK4-204ENST00000586074 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
PCSK4-204ENST00000586074 COL11A2P13942 1736 aaPredicted RBP25.37■■□□□ 1.65
PCSK4-204ENST00000586074 CAMTA2O94983 1202 aa25.37■■□□□ 1.65
PCSK4-204ENST00000586074 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
PCSK4-204ENST00000586074 ZNF622Q969S3 477 aaKnown RBP eCLIP25.37■■□□□ 1.65
PCSK4-204ENST00000586074 SETDB2Q96T68 719 aa25.37■■□□□ 1.65
PCSK4-204ENST00000586074 NFKBIEO00221 500 aa25.36■■□□□ 1.65
PCSK4-204ENST00000586074 KCNQ3O43525 872 aa25.36■■□□□ 1.65
PCSK4-204ENST00000586074 DZIP3Q86Y13 1208 aaKnown RBP25.36■■□□□ 1.65
PCSK4-204ENST00000586074 DNAJC5GQ8N7S2 189 aa25.36■■□□□ 1.65
PCSK4-204ENST00000586074 SMC1BQ8NDV3 1235 aa25.36■■□□□ 1.65
PCSK4-204ENST00000586074 GLTPD2A6NH11 291 aa25.35■■□□□ 1.65
PCSK4-204ENST00000586074 ST5P78524 1137 aa25.35■■□□□ 1.65
PCSK4-204ENST00000586074 PRELPP51888 382 aa25.34■■□□□ 1.65
PCSK4-204ENST00000586074 SNRPA1P09661 255 aaKnown RBP25.33■■□□□ 1.65
PCSK4-204ENST00000586074 MCM10Q7L590 875 aa25.33■■□□□ 1.65
PCSK4-204ENST00000586074 ZNF652Q9Y2D9 606 aa25.33■■□□□ 1.65
PCSK4-204ENST00000586074 VEGFAP15692 232 aaPredicted RBP25.32■■□□□ 1.64
PCSK4-204ENST00000586074 CCDC24Q8N4L8 307 aa25.32■■□□□ 1.64
PCSK4-204ENST00000586074 HTATSF1O43719 755 aaKnown RBP25.31■■□□□ 1.64
PCSK4-204ENST00000586074 C21orf2O43822 256 aa25.31■■□□□ 1.64
PCSK4-204ENST00000586074 CNKSR1Q969H4 720 aa25.31■■□□□ 1.64
PCSK4-204ENST00000586074 USP16Q9Y5T5 823 aa25.31■■□□□ 1.64
PCSK4-204ENST00000586074 STYK1Q6J9G0 422 aa25.3■■□□□ 1.64
PCSK4-204ENST00000586074 CLEC4GQ6UXB4 293 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms