RNA–Protein interactions for RNA: ENST00000585728.5

GFAP-206, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-206ENST00000585728 POLRMTO00411 1230 aaKnown RBP17.2■□□□□ 0.34
GFAP-206ENST00000585728 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
GFAP-206ENST00000585728 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
GFAP-206ENST00000585728 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
GFAP-206ENST00000585728 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
GFAP-206ENST00000585728 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
GFAP-206ENST00000585728 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
GFAP-206ENST00000585728 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
GFAP-206ENST00000585728 CNGB1Q14028 1251 aaPredicted RBP17.19■□□□□ 0.34
GFAP-206ENST00000585728 GNAT3A8MTJ3 354 aa17.18■□□□□ 0.34
GFAP-206ENST00000585728 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
GFAP-206ENST00000585728 KIF3CO14782 793 aa17.17■□□□□ 0.34
GFAP-206ENST00000585728 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
GFAP-206ENST00000585728 TEFQ10587 303 aa17.16■□□□□ 0.34
GFAP-206ENST00000585728 NFIXQ14938 502 aa17.16■□□□□ 0.34
GFAP-206ENST00000585728 DALRD3Q5D0E6 543 aaKnown RBP17.16■□□□□ 0.34
GFAP-206ENST00000585728 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
GFAP-206ENST00000585728 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
GFAP-206ENST00000585728 STARD3NLO95772 234 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
GFAP-206ENST00000585728 CHRNA5P30532 468 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 HEG1Q9ULI3 1381 aa17.15■□□□□ 0.34
GFAP-206ENST00000585728 HSPA6P17066 643 aa17.14■□□□□ 0.33
GFAP-206ENST00000585728 EIF5P55010 431 aaKnown RBP17.14■□□□□ 0.33
GFAP-206ENST00000585728 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
GFAP-206ENST00000585728 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
GFAP-206ENST00000585728 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
GFAP-206ENST00000585728 A0A087WZG4 1122 aa17.13■□□□□ 0.33
GFAP-206ENST00000585728 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
GFAP-206ENST00000585728 SERPINB2P05120 415 aa17.12■□□□□ 0.33
GFAP-206ENST00000585728 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
GFAP-206ENST00000585728 C9orf131Q5VYM1 1079 aa17.12■□□□□ 0.33
GFAP-206ENST00000585728 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
GFAP-206ENST00000585728 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
GFAP-206ENST00000585728 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
GFAP-206ENST00000585728 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
GFAP-206ENST00000585728 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
GFAP-206ENST00000585728 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
GFAP-206ENST00000585728 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
GFAP-206ENST00000585728 TOMM70O94826 608 aa17.09■□□□□ 0.33
GFAP-206ENST00000585728 IL6STP40189 918 aaPredicted RBP17.09■□□□□ 0.33
GFAP-206ENST00000585728 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.32
GFAP-206ENST00000585728 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
GFAP-206ENST00000585728 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
GFAP-206ENST00000585728 RNF181Q9P0P0 153 aa17.08■□□□□ 0.32
GFAP-206ENST00000585728 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
GFAP-206ENST00000585728 KCNQ3O43525 872 aa17.07■□□□□ 0.32
GFAP-206ENST00000585728 U2AF1L5P0DN76 240 aaPredicted RBP17.07■□□□□ 0.32
GFAP-206ENST00000585728 U2AF1Q01081 240 aaKnown RBP eCLIP17.07■□□□□ 0.32
GFAP-206ENST00000585728 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
GFAP-206ENST00000585728 BICDL1Q6ZP65 573 aa17.07■□□□□ 0.32
GFAP-206ENST00000585728 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
GFAP-206ENST00000585728 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
GFAP-206ENST00000585728 A1BGP04217 495 aa17.06■□□□□ 0.32
GFAP-206ENST00000585728 C2CD5Q86YS7 1000 aa17.06■□□□□ 0.32
GFAP-206ENST00000585728 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
GFAP-206ENST00000585728 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
GFAP-206ENST00000585728 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
GFAP-206ENST00000585728 FER1L6Q2WGJ9 1857 aa17.05■□□□□ 0.32
GFAP-206ENST00000585728 ARFGEF2Q9Y6D5 1785 aa17.05■□□□□ 0.32
GFAP-206ENST00000585728 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
GFAP-206ENST00000585728 H0YIN7 160 aa17.05■□□□□ 0.32
GFAP-206ENST00000585728 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
GFAP-206ENST00000585728 PDZRN3Q9UPQ7 1066 aa17.05■□□□□ 0.32
GFAP-206ENST00000585728 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
GFAP-206ENST00000585728 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
GFAP-206ENST00000585728 HTATSF1O43719 755 aaKnown RBP17.04■□□□□ 0.32
GFAP-206ENST00000585728 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
GFAP-206ENST00000585728 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
GFAP-206ENST00000585728 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
GFAP-206ENST00000585728 WDR90Q96KV7 1748 aa17.04■□□□□ 0.32
GFAP-206ENST00000585728 CAMTA2O94983 1202 aa17.03■□□□□ 0.32
GFAP-206ENST00000585728 APLP1P51693 650 aa17.03■□□□□ 0.32
GFAP-206ENST00000585728 RASSF7Q02833 373 aa17.03■□□□□ 0.32
GFAP-206ENST00000585728 MCM10Q7L590 875 aa17.03■□□□□ 0.32
GFAP-206ENST00000585728 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
GFAP-206ENST00000585728 PDE6BP35913 854 aa17.02■□□□□ 0.32
GFAP-206ENST00000585728 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
GFAP-206ENST00000585728 BRIP1Q9BX63 1249 aa17.02■□□□□ 0.32
GFAP-206ENST00000585728 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.31
GFAP-206ENST00000585728 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
GFAP-206ENST00000585728 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
GFAP-206ENST00000585728 LMNB1P20700 586 aa17.01■□□□□ 0.31
GFAP-206ENST00000585728 PRELPP51888 382 aa17.01■□□□□ 0.31
GFAP-206ENST00000585728 DZIP3Q86Y13 1208 aaKnown RBP17.01■□□□□ 0.31
GFAP-206ENST00000585728 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
GFAP-206ENST00000585728 SETDB2Q96T68 719 aa17.01■□□□□ 0.31
GFAP-206ENST00000585728 SLX4Q8IY92 1834 aa17■□□□□ 0.31
GFAP-206ENST00000585728 DCTN1Q14203 1278 aa17■□□□□ 0.31
GFAP-206ENST00000585728 RRAGCQ9HB90 399 aa17■□□□□ 0.31
GFAP-206ENST00000585728 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
GFAP-206ENST00000585728 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
GFAP-206ENST00000585728 NFKBIEO00221 500 aa16.98■□□□□ 0.31
GFAP-206ENST00000585728 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
GFAP-206ENST00000585728 FSTL1Q12841 308 aa16.98■□□□□ 0.31
GFAP-206ENST00000585728 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms