RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	MRC1	P22897	1456 aa		22.04	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	GNAT3	A8MTJ3	354 aa		22.04	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	N4BP2	Q86UW6	1770 aa	Predicted RBP	22.04	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	SCN11A	Q9UI33	1791 aa		22.04	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	TJP1	Q07157	1748 aa		22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	KCP	Q6ZWJ8	1503 aa		22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	STARD3NL	O95772	234 aa		22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	EIF5	P55010	431 aa	Known RBP	22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	TTC5	Q8N0Z6	440 aa		22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	GAS2L2	Q8NHY3	880 aa		22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	ZNF496	Q96IT1	587 aa	Predicted RBP	22.03	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	COL15A1	P39059	1388 aa		22.02	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	SERPINB2	P05120	415 aa		22.02	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	TEF	Q10587	303 aa		22.02	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	ZNF790	Q6PG37	636 aa		22.02	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	PHACTR3	Q96KR7	559 aa		22.02	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	NMRK2	Q9NPI5	230 aa		22.02	■■□□□ 1.12
PRKAR1A-206	ENST00000585460	COL3A1	P02461	1466 aa	Predicted RBP	22.01	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	TOMM70	O94826	608 aa		22	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	ADAMTS7	Q9UKP4	1686 aa		21.99	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	TEX13A	Q9BXU3	409 aa	Predicted RBP	21.99	■■□□□ 1.11
PRKAR1A-206	ENST00000585460		A0A087WZG4	1122 aa		21.98	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	RNF181	Q9P0P0	153 aa		21.98	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	KCNQ3	O43525	872 aa		21.97	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	PRKAR2B	P31323	418 aa		21.97	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	BICDL1	Q6ZP65	573 aa		21.97	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	RSPH6A	Q9H0K4	717 aa		21.97	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	HEG1	Q9ULI3	1381 aa		21.97	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	A1BG	P04217	495 aa		21.96	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	CFAP53	Q96M91	514 aa		21.96	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	TBC1D2B	Q9UPU7	963 aa		21.96	■■□□□ 1.11
PRKAR1A-206	ENST00000585460	TBC1D9B	Q66K14	1250 aa		21.95	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	C2CD5	Q86YS7	1000 aa		21.95	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	FMNL2	Q96PY5	1086 aa		21.95	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	TTLL6	Q8N841	843 aa		21.94	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	CEMIP	Q8WUJ3	1361 aa		21.94	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	BTBD11	A6QL63	1104 aa		21.93	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	PPP2R1A	P30153	589 aa		21.93	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	IL6ST	P40189	918 aa	Predicted RBP	21.93	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	APLP1	P51693	650 aa		21.93	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	NUDC	Q9Y266	331 aa		21.93	■■□□□ 1.1
PRKAR1A-206	ENST00000585460		H0YIN7	160 aa		21.92	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	PRELP	P51888	382 aa		21.92	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	RRAGC	Q9HB90	399 aa		21.92	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	ZNF330	Q9Y3S2	320 aa	Predicted RBP	21.92	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	USP16	Q9Y5T5	823 aa		21.92	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	U2AF1L5	P0DN76	240 aa	Predicted RBP	21.91	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	U2AF1	Q01081	240 aa	Known RBP eCLIP	21.91	■■□□□ 1.1	8e-6	■□□□□ 10.9
PRKAR1A-206	ENST00000585460	RASSF7	Q02833	373 aa		21.91	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	DNAJC5G	Q8N7S2	189 aa		21.91	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	RBM46	Q8TBY0	533 aa	Known RBP	21.91	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	KDM2B	Q8NHM5	1336 aa		21.9	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	CCDC24	Q8N4L8	307 aa		21.9	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	BRIP1	Q9BX63	1249 aa		21.9	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	BRCA1	P38398	1863 aa	Known RBP	21.9	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	CARMIL3	Q8ND23	1372 aa		21.89	■■□□□ 1.1
PRKAR1A-206	ENST00000585460	CAMTA2	O94983	1202 aa		21.89	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	LMNB1	P20700	586 aa		21.88	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	PRR5L	Q6MZQ0	368 aa		21.88	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	MCM10	Q7L590	875 aa		21.88	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	C16orf71	Q8IYS4	520 aa	Predicted RBP	21.88	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	PRAMEF22	A3QJZ6	481 aa		21.87	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	ZNF622	Q969S3	477 aa	Known RBP eCLIP	21.87	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	SETDB2	Q96T68	719 aa		21.87	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	PDE6B	P35913	854 aa		21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	PIP4K2A	P48426	406 aa	Predicted RBP	21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	DCTN1	Q14203	1278 aa		21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	IFFO2	Q5TF58	517 aa		21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	NPM2	Q86SE8	214 aa	Known RBP	21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	RTF1	Q92541	710 aa	Known RBP	21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	PDZRN3	Q9UPQ7	1066 aa		21.86	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	ARFGEF1	Q9Y6D6	1849 aa		21.85	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	NFKBIE	O00221	500 aa		21.85	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	FSTL1	Q12841	308 aa		21.85	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	DZIP3	Q86Y13	1208 aa	Known RBP	21.85	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	UBR2	Q8IWV8	1755 aa		21.84	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	SNRPA1	P09661	255 aa	Known RBP	21.84	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	NRXN2	Q9P2S2	1712 aa		21.83	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	GLTPD2	A6NH11	291 aa		21.83	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	HTATSF1	O43719	755 aa	Known RBP	21.83	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	C21orf2	O43822	256 aa		21.83	■■□□□ 1.09
PRKAR1A-206	ENST00000585460	ZC3H4	Q9UPT8	1303 aa	Known RBP	21.82	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	ZNF219	Q9P2Y4	722 aa	Predicted RBP	21.82	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	NBPF26	B4DH59	902 aa		21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	HTRA3	P83110	453 aa		21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	TAF7	Q15545	349 aa	Predicted RBP	21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	NBPF10	Q6P3W6	841 aa	Known RBP	21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	CLEC4G	Q6UXB4	293 aa		21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	NBPF15	Q8N660	670 aa		21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	CNBD1	Q8NA66	436 aa		21.81	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	AFDN	P55196	1824 aa	Known RBP	21.8	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	VEGFA	P15692	232 aa	Predicted RBP	21.8	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	MIS18A	Q9NYP9	233 aa		21.8	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	SRGN	P10124	158 aa		21.79	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	STYK1	Q6J9G0	422 aa		21.78	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	CNKSR1	Q969H4	720 aa		21.78	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	VIRMA	Q69YN4	1812 aa	Known RBP	21.78	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	POTEC	B2RU33	542 aa		21.77	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	NPHP1	O15259	732 aa		21.77	■■□□□ 1.08
PRKAR1A-206	ENST00000585460	ST5	P78524	1137 aa		21.77	■■□□□ 1.08

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms