RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 AFDNP55196 1824 aaKnown RBP30.94■■■□□ 2.54
LSM7-203ENST00000585409 WDR90Q96KV7 1748 aa30.93■■■□□ 2.54
LSM7-203ENST00000585409 SLC52A2Q9HAB3 445 aa30.93■■■□□ 2.54
LSM7-203ENST00000585409 NRXN2Q9P2S2 1712 aa30.92■■■□□ 2.54
LSM7-203ENST00000585409 MYBBP1AQ9BQG0 1328 aaKnown RBP30.92■■■□□ 2.54
LSM7-203ENST00000585409 DNAJC10Q8IXB1 793 aa30.91■■■□□ 2.54
LSM7-203ENST00000585409 RBM46Q8TBY0 533 aaKnown RBP30.91■■■□□ 2.54
LSM7-203ENST00000585409 NUDCQ9Y266 331 aa30.91■■■□□ 2.54
LSM7-203ENST00000585409 SOS1Q07889 1333 aaPredicted RBP30.91■■■□□ 2.54
LSM7-203ENST00000585409 CHRNA5P30532 468 aa30.9■■■□□ 2.54
LSM7-203ENST00000585409 KCPQ6ZWJ8 1503 aa30.89■■■□□ 2.54
LSM7-203ENST00000585409 PRKRIP1Q9H875 184 aaPredicted RBP30.89■■■□□ 2.54
LSM7-203ENST00000585409 LGR6Q9HBX8 967 aa30.89■■■□□ 2.54
LSM7-203ENST00000585409 TNRC6CQ9HCJ0 1690 aaKnown RBP30.89■■■□□ 2.54
LSM7-203ENST00000585409 DLEC1Q9Y238 1755 aa30.89■■■□□ 2.54
LSM7-203ENST00000585409 USPL1Q5W0Q7 1092 aa30.88■■■□□ 2.53
LSM7-203ENST00000585409 ANP32CO43423 234 aa30.87■■■□□ 2.53
LSM7-203ENST00000585409 ZPR1O75312 459 aa30.87■■■□□ 2.53
LSM7-203ENST00000585409 CYP19A1P11511 503 aaPredicted RBP30.87■■■□□ 2.53
LSM7-203ENST00000585409 UBR2Q8IWV8 1755 aa30.87■■■□□ 2.53
LSM7-203ENST00000585409 RNF181Q9P0P0 153 aa30.86■■■□□ 2.53
LSM7-203ENST00000585409 KDM2BQ8NHM5 1336 aa30.85■■■□□ 2.53
LSM7-203ENST00000585409 RNMTO43148 476 aaKnown RBP30.85■■■□□ 2.53
LSM7-203ENST00000585409 COL3A1P02461 1466 aaPredicted RBP30.84■■■□□ 2.53
LSM7-203ENST00000585409 NARFQ9UHQ1 456 aa30.84■■■□□ 2.53
LSM7-203ENST00000585409 COL15A1P39059 1388 aa30.83■■■□□ 2.53
LSM7-203ENST00000585409 SLC39A6Q13433 755 aa30.83■■■□□ 2.53
LSM7-203ENST00000585409 C16orf71Q8IYS4 520 aaPredicted RBP30.83■■■□□ 2.53
LSM7-203ENST00000585409 U2SURPO15042 1029 aaKnown RBP30.82■■■□□ 2.52
LSM7-203ENST00000585409 FSTL1Q12841 308 aa30.82■■■□□ 2.52
LSM7-203ENST00000585409 NFIXQ14938 502 aa30.82■■■□□ 2.52
LSM7-203ENST00000585409 ZBTB1Q9Y2K1 713 aa30.81■■■□□ 2.52
LSM7-203ENST00000585409 HMOX1P09601 288 aa30.8■■■□□ 2.52
LSM7-203ENST00000585409 VSIG10Q8N0Z9 540 aa30.8■■■□□ 2.52
LSM7-203ENST00000585409 BCL2L12Q9HB09 334 aa30.8■■■□□ 2.52
LSM7-203ENST00000585409 MTHFSDQ2M296 383 aaKnown RBP30.79■■■□□ 2.52
LSM7-203ENST00000585409 ZC3H4Q9UPT8 1303 aaKnown RBP30.77■■■□□ 2.52
LSM7-203ENST00000585409 RRAGCQ9HB90 399 aa30.77■■■□□ 2.52
LSM7-203ENST00000585409 CCDC88AQ3V6T2 1871 aa30.76■■■□□ 2.52
LSM7-203ENST00000585409 RASSF7Q02833 373 aa30.75■■■□□ 2.51
LSM7-203ENST00000585409 SERPINB2P05120 415 aa30.74■■■□□ 2.51
LSM7-203ENST00000585409 U2AF1L5P0DN76 240 aaPredicted RBP30.73■■■□□ 2.51
LSM7-203ENST00000585409 HTRA3P83110 453 aa30.73■■■□□ 2.51
LSM7-203ENST00000585409 U2AF1Q01081 240 aaKnown RBP eCLIP30.73■■■□□ 2.51
LSM7-203ENST00000585409 KLRG1Q96E93 195 aa30.73■■■□□ 2.51
LSM7-203ENST00000585409 TIAM2Q8IVF5 1701 aa30.73■■■□□ 2.51
LSM7-203ENST00000585409 SIPA1L3O60292 1781 aaPredicted RBP30.72■■■□□ 2.51
LSM7-203ENST00000585409 JMYQ8N9B5 988 aa30.72■■■□□ 2.51
LSM7-203ENST00000585409 ANKRD31Q8N7Z5 1873 aa30.72■■■□□ 2.51
LSM7-203ENST00000585409 CARMIL3Q8ND23 1372 aa30.71■■■□□ 2.51
LSM7-203ENST00000585409 PRELPP51888 382 aa30.71■■■□□ 2.51
LSM7-203ENST00000585409 LMNB1P20700 586 aa30.7■■■□□ 2.51
LSM7-203ENST00000585409 PNNQ9H307 717 aaKnown RBP30.7■■■□□ 2.51
LSM7-203ENST00000585409 SCN7AQ01118 1682 aa30.7■■■□□ 2.5
LSM7-203ENST00000585409 NEFMP07197 916 aa30.69■■■□□ 2.5
LSM7-203ENST00000585409 CANXP27824 592 aaKnown RBP30.69■■■□□ 2.5
LSM7-203ENST00000585409 EIF5P55010 431 aaKnown RBP30.69■■■□□ 2.5
LSM7-203ENST00000585409 TTLL6Q8N841 843 aa30.69■■■□□ 2.5
LSM7-203ENST00000585409 SMC1BQ8NDV3 1235 aa30.68■■■□□ 2.5
LSM7-203ENST00000585409 C2CD5Q86YS7 1000 aa30.67■■■□□ 2.5
LSM7-203ENST00000585409 GLTPD2A6NH11 291 aa30.66■■■□□ 2.5
LSM7-203ENST00000585409 STARD3NLO95772 234 aa30.66■■■□□ 2.5
LSM7-203ENST00000585409 H0YIN7 160 aa30.65■■■□□ 2.5
LSM7-203ENST00000585409 WDR43Q15061 677 aaKnown RBP eCLIP30.65■■■□□ 2.5
LSM7-203ENST00000585409 TTC5Q8N0Z6 440 aa30.65■■■□□ 2.5
LSM7-203ENST00000585409 DICER1Q9UPY3 1922 aaKnown RBP30.65■■■□□ 2.5
LSM7-203ENST00000585409 COL11A2P13942 1736 aaPredicted RBP30.64■■■□□ 2.5
LSM7-203ENST00000585409 A0A087WZG4 1122 aa30.64■■■□□ 2.5
LSM7-203ENST00000585409 NFKBIEO00221 500 aa30.64■■■□□ 2.5
LSM7-203ENST00000585409 ZNF496Q96IT1 587 aaPredicted RBP30.63■■■□□ 2.49
LSM7-203ENST00000585409 HEG1Q9ULI3 1381 aa30.63■■■□□ 2.49
LSM7-203ENST00000585409 FER1L6Q2WGJ9 1857 aa30.63■■■□□ 2.49
LSM7-203ENST00000585409 VEGFAP15692 232 aaPredicted RBP30.62■■■□□ 2.49
LSM7-203ENST00000585409 BICDL1Q6ZP65 573 aa30.62■■■□□ 2.49
LSM7-203ENST00000585409 IL17REQ8NFR9 667 aa30.62■■■□□ 2.49
LSM7-203ENST00000585409 PRKAR2BP31323 418 aa30.61■■■□□ 2.49
LSM7-203ENST00000585409 TBC1D9BQ66K14 1250 aa30.61■■■□□ 2.49
LSM7-203ENST00000585409 ZNF790Q6PG37 636 aa30.61■■■□□ 2.49
LSM7-203ENST00000585409 RSPH6AQ9H0K4 717 aa30.61■■■□□ 2.49
LSM7-203ENST00000585409 GAS2L2Q8NHY3 880 aa30.6■■■□□ 2.49
LSM7-203ENST00000585409 TEX13AQ9BXU3 409 aaPredicted RBP30.6■■■□□ 2.49
LSM7-203ENST00000585409 GNAT3A8MTJ3 354 aa30.59■■■□□ 2.49
LSM7-203ENST00000585409 TEFQ10587 303 aa30.59■■■□□ 2.49
LSM7-203ENST00000585409 BRIP1Q9BX63 1249 aa30.59■■■□□ 2.49
LSM7-203ENST00000585409 PDZRN3Q9UPQ7 1066 aa30.58■■■□□ 2.49
LSM7-203ENST00000585409 PCNTO95613 3336 aa30.57■■■□□ 2.48
LSM7-203ENST00000585409 BCORQ6W2J9 1755 aa30.57■■■□□ 2.48
LSM7-203ENST00000585409 IL6STP40189 918 aaPredicted RBP30.56■■■□□ 2.48
LSM7-203ENST00000585409 PRR5LQ6MZQ0 368 aa30.56■■■□□ 2.48
LSM7-203ENST00000585409 CEMIPQ8WUJ3 1361 aa30.55■■■□□ 2.48
LSM7-203ENST00000585409 MAPK8IP3Q9UPT6 1336 aa30.55■■■□□ 2.48
LSM7-203ENST00000585409 POTECB2RU33 542 aa30.55■■■□□ 2.48
LSM7-203ENST00000585409 PDE6BP35913 854 aa30.55■■■□□ 2.48
LSM7-203ENST00000585409 COL13A1Q5TAT6 717 aaPredicted RBP30.55■■■□□ 2.48
LSM7-203ENST00000585409 TBC1D2BQ9UPU7 963 aa30.55■■■□□ 2.48
LSM7-203ENST00000585409 ARFGEF2Q9Y6D5 1785 aa30.54■■■□□ 2.48
LSM7-203ENST00000585409 DIEXFQ68CQ4 756 aaKnown RBP30.54■■■□□ 2.48
LSM7-203ENST00000585409 MRS2Q9HD23 443 aa30.54■■■□□ 2.48
LSM7-203ENST00000585409 CACNA1SQ13698 1873 aa30.53■■■□□ 2.48
LSM7-203ENST00000585409 ZNF622Q969S3 477 aaKnown RBP eCLIP30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms