RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 DNAJC10Q8IXB1 793 aa30.38■■■□□ 2.45
LSM7-202ENST00000585395 PNISRQ8TF01 805 aaKnown RBP30.38■■■□□ 2.45
LSM7-202ENST00000585395 SIPA1L3O60292 1781 aaPredicted RBP30.37■■■□□ 2.45
LSM7-202ENST00000585395 RPS6KA4O75676 772 aa30.37■■■□□ 2.45
LSM7-202ENST00000585395 MCM10Q7L590 875 aa30.37■■■□□ 2.45
LSM7-202ENST00000585395 KIF13BQ9NQT8 1826 aa30.37■■■□□ 2.45
LSM7-202ENST00000585395 PXDNLA1KZ92 1463 aa30.37■■■□□ 2.45
LSM7-202ENST00000585395 KCPQ6ZWJ8 1503 aa30.37■■■□□ 2.45
LSM7-202ENST00000585395 MYH14Q7Z406 1995 aaKnown RBP30.36■■■□□ 2.45
LSM7-202ENST00000585395 BTBD11A6QL63 1104 aa30.36■■■□□ 2.45
LSM7-202ENST00000585395 ADRA2BP18089 450 aa30.36■■■□□ 2.45
LSM7-202ENST00000585395 RFC4P35249 363 aa30.36■■■□□ 2.45
LSM7-202ENST00000585395 TGFB2P61812 414 aa30.36■■■□□ 2.45
LSM7-202ENST00000585395 LMOD3Q0VAK6 560 aa30.36■■■□□ 2.45
LSM7-202ENST00000585395 MMP10P09238 476 aa30.35■■■□□ 2.45
LSM7-202ENST00000585395 CEMIPQ8WUJ3 1361 aa30.35■■■□□ 2.45
LSM7-202ENST00000585395 UBR2Q8IWV8 1755 aa30.35■■■□□ 2.45
LSM7-202ENST00000585395 ZNF790Q6PG37 636 aa30.34■■■□□ 2.45
LSM7-202ENST00000585395 CCDC146Q8IYE0 955 aa30.34■■■□□ 2.45
LSM7-202ENST00000585395 DLG5Q8TDM6 1919 aa30.34■■■□□ 2.45
LSM7-202ENST00000585395 CCDC87Q9NVE4 849 aa30.33■■■□□ 2.45
LSM7-202ENST00000585395 DCTN1Q14203 1278 aa30.32■■■□□ 2.44
LSM7-202ENST00000585395 VSIG10Q8N0Z9 540 aa30.32■■■□□ 2.44
LSM7-202ENST00000585395 ARHGEF1Q92888 912 aaKnown RBP30.32■■■□□ 2.44
LSM7-202ENST00000585395 BCS1LQ9Y276 419 aa30.32■■■□□ 2.44
LSM7-202ENST00000585395 KIAA1551Q9HCM1 1747 aa30.32■■■□□ 2.44
LSM7-202ENST00000585395 FMNL2Q96PY5 1086 aa30.31■■■□□ 2.44
LSM7-202ENST00000585395 TMPOP42166 694 aaKnown RBP30.3■■■□□ 2.44
LSM7-202ENST00000585395 RIPK4P57078 832 aa30.3■■■□□ 2.44
LSM7-202ENST00000585395 RBM46Q8TBY0 533 aaKnown RBP30.3■■■□□ 2.44
LSM7-202ENST00000585395 WDR90Q96KV7 1748 aa30.3■■■□□ 2.44
LSM7-202ENST00000585395 N4BP2Q86UW6 1770 aaPredicted RBP30.29■■■□□ 2.44
LSM7-202ENST00000585395 STARD3NLO95772 234 aa30.29■■■□□ 2.44
LSM7-202ENST00000585395 ARHGAP27Q6ZUM4 889 aa30.29■■■□□ 2.44
LSM7-202ENST00000585395 ZNF496Q96IT1 587 aaPredicted RBP30.29■■■□□ 2.44
LSM7-202ENST00000585395 NMRK2Q9NPI5 230 aa30.29■■■□□ 2.44
LSM7-202ENST00000585395 C4AP0C0L4 1744 aa30.28■■■□□ 2.44
LSM7-202ENST00000585395 CYP19A1P11511 503 aaPredicted RBP30.28■■■□□ 2.44
LSM7-202ENST00000585395 NLGN1Q8N2Q7 840 aa30.28■■■□□ 2.44
LSM7-202ENST00000585395 HEG1Q9ULI3 1381 aa30.28■■■□□ 2.44
LSM7-202ENST00000585395 A0A0G2JLW4 131 aa30.27■■■□□ 2.44
LSM7-202ENST00000585395 TEX13AQ9BXU3 409 aaPredicted RBP30.27■■■□□ 2.44
LSM7-202ENST00000585395 C10orf71Q711Q0 1435 aa30.27■■■□□ 2.44
LSM7-202ENST00000585395 INTS5Q6P9B9 1019 aaKnown RBP30.26■■■□□ 2.43
LSM7-202ENST00000585395 FAM9BQ8IZU0 186 aa30.26■■■□□ 2.43
LSM7-202ENST00000585395 CANXP27824 592 aaKnown RBP30.24■■■□□ 2.43
LSM7-202ENST00000585395 C16orf71Q8IYS4 520 aaPredicted RBP30.24■■■□□ 2.43
LSM7-202ENST00000585395 KLRG1Q96E93 195 aa30.24■■■□□ 2.43
LSM7-202ENST00000585395 ZPR1O75312 459 aa30.23■■■□□ 2.43
LSM7-202ENST00000585395 TAF7Q15545 349 aaPredicted RBP30.23■■■□□ 2.43
LSM7-202ENST00000585395 NEUROD2Q15784 382 aa30.23■■■□□ 2.43
LSM7-202ENST00000585395 NPM2Q86SE8 214 aaKnown RBP30.23■■■□□ 2.43
LSM7-202ENST00000585395 JMYQ8N9B5 988 aa30.23■■■□□ 2.43
LSM7-202ENST00000585395 ZBTB1Q9Y2K1 713 aa30.23■■■□□ 2.43
LSM7-202ENST00000585395 APAF1O14727 1248 aa30.22■■■□□ 2.43
LSM7-202ENST00000585395 KCNQ3O43525 872 aa30.22■■■□□ 2.43
LSM7-202ENST00000585395 FSTL1Q12841 308 aa30.22■■■□□ 2.43
LSM7-202ENST00000585395 ZNF330Q9Y3S2 320 aaPredicted RBP30.22■■■□□ 2.43
LSM7-202ENST00000585395 SOS1Q07889 1333 aaPredicted RBP30.22■■■□□ 2.43
LSM7-202ENST00000585395 COL15A1P39059 1388 aa30.21■■■□□ 2.43
LSM7-202ENST00000585395 GYS1P13807 737 aa30.21■■■□□ 2.43
LSM7-202ENST00000585395 MIER1Q8N108 512 aa30.21■■■□□ 2.43
LSM7-202ENST00000585395 SRP68Q9UHB9 627 aaKnown RBP30.21■■■□□ 2.43
LSM7-202ENST00000585395 RRP7AQ9Y3A4 280 aaKnown RBP30.21■■■□□ 2.43
LSM7-202ENST00000585395 DPEP1P16444 411 aa30.2■■■□□ 2.43
LSM7-202ENST00000585395 COL13A1Q5TAT6 717 aaPredicted RBP30.2■■■□□ 2.43
LSM7-202ENST00000585395 BRCA1P38398 1863 aaKnown RBP30.2■■■□□ 2.42
LSM7-202ENST00000585395 USP42Q9H9J4 1324 aaKnown RBP30.2■■■□□ 2.42
LSM7-202ENST00000585395 PARP3Q9Y6F1 533 aa30.19■■■□□ 2.42
LSM7-202ENST00000585395 CALD1Q05682 793 aaKnown RBP30.18■■■□□ 2.42
LSM7-202ENST00000585395 C9orf131Q5VYM1 1079 aa30.18■■■□□ 2.42
LSM7-202ENST00000585395 THUMPD2Q9BTF0 503 aaKnown RBP30.18■■■□□ 2.42
LSM7-202ENST00000585395 NCBP3Q53F19 620 aaKnown RBP30.17■■■□□ 2.42
LSM7-202ENST00000585395 MIS18AQ9NYP9 233 aa30.17■■■□□ 2.42
LSM7-202ENST00000585395 ARFGEF1Q9Y6D6 1849 aa30.17■■■□□ 2.42
LSM7-202ENST00000585395 SNRPA1P09661 255 aaKnown RBP30.16■■■□□ 2.42
LSM7-202ENST00000585395 NGEFQ8N5V2 710 aa30.16■■■□□ 2.42
LSM7-202ENST00000585395 KDM2BQ8NHM5 1336 aa30.16■■■□□ 2.42
LSM7-202ENST00000585395 A0A087WZG4 1122 aa30.15■■■□□ 2.42
LSM7-202ENST00000585395 USPL1Q5W0Q7 1092 aa30.15■■■□□ 2.42
LSM7-202ENST00000585395 HTRA3P83110 453 aa30.14■■■□□ 2.42
LSM7-202ENST00000585395 KCNA3P22001 575 aa30.13■■■□□ 2.41
LSM7-202ENST00000585395 FKBP8Q14318 412 aa30.12■■■□□ 2.41
LSM7-202ENST00000585395 BABAM1Q9NWV8 329 aa30.12■■■□□ 2.41
LSM7-202ENST00000585395 PIM2Q9P1W9 311 aa30.12■■■□□ 2.41
LSM7-202ENST00000585395 NARFQ9UHQ1 456 aa30.12■■■□□ 2.41
LSM7-202ENST00000585395 PCNTO95613 3336 aa30.12■■■□□ 2.41
LSM7-202ENST00000585395 KDM3BQ7LBC6 1761 aa30.11■■■□□ 2.41
LSM7-202ENST00000585395 A1BGP04217 495 aa30.11■■■□□ 2.41
LSM7-202ENST00000585395 TRIM35Q9UPQ4 493 aa30.11■■■□□ 2.41
LSM7-202ENST00000585395 CCDC27Q2M243 656 aa30.1■■■□□ 2.41
LSM7-202ENST00000585395 IL6STP40189 918 aaPredicted RBP30.09■■■□□ 2.41
LSM7-202ENST00000585395 TNS4Q8IZW8 715 aa30.09■■■□□ 2.41
LSM7-202ENST00000585395 TSPYL4Q9UJ04 414 aa30.09■■■□□ 2.41
LSM7-202ENST00000585395 USP16Q9Y5T5 823 aa30.09■■■□□ 2.41
LSM7-202ENST00000585395 PRAMEF22A3QJZ6 481 aa30.08■■■□□ 2.41
LSM7-202ENST00000585395 EIF5P55010 431 aaKnown RBP30.08■■■□□ 2.41
LSM7-202ENST00000585395 DALRD3Q5D0E6 543 aaKnown RBP30.08■■■□□ 2.41
LSM7-202ENST00000585395 TNRC6CQ9HCJ0 1690 aaKnown RBP30.07■■■□□ 2.41
LSM7-202ENST00000585395 RNF181Q9P0P0 153 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms