RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 PODXL2Q9NZ53 605 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 USP25Q9UHP3 1055 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 EVI5LQ96CN4 794 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 SNW1Q13573 536 aaKnown RBP8.48□□□□□ -1.05
CDH8-214ENST00000585315 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 AMPD3Q01432 767 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 SPECC1Q5M775 1068 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 CTR9Q6PD62 1173 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
CDH8-214ENST00000585315 FAM200AQ8TCP9 573 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 ZHX3Q9H4I2 956 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 IL1RAPL2Q9NP60 686 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 IFFO1Q0D2I5 559 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 SIL1Q9H173 461 aa8.48□□□□□ -1.05
CDH8-214ENST00000585315 FAM193AP78312 1265 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 SKIDA1Q1XH10 827 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 CCDC12Q8WUD4 166 aaPredicted RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 RALGAPBQ86X10 1494 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 ADCY5O95622 1261 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 SNX21Q969T3 373 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 XPCQ01831 940 aaPredicted RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 TMEM266Q2M3C6 531 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 DUSP27Q5VZP5 1158 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 CTAGE1Q96RT6 745 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 BCL11BQ9C0K0 894 aaPredicted RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 LRP2BPQ9P2M1 347 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 SEC63Q9UGP8 760 aaKnown RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 CKAP4Q07065 602 aaKnown RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 IFI16Q16666 785 aaKnown RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 LRSAM1Q6UWE0 723 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 BTBD11A6QL63 1104 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 HOOK3Q86VS8 718 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 CNNM3Q8NE01 707 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 LRRC27Q9C0I9 530 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 NAPBQ9H115 298 aa8.47□□□□□ -1.05
CDH8-214ENST00000585315 RPRD2Q5VT52 1461 aaKnown RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 PRPF40BQ6NWY9 871 aaKnown RBP8.47□□□□□ -1.05
CDH8-214ENST00000585315 IGHMBP2P38935 993 aaKnown RBP8.46□□□□□ -1.05
CDH8-214ENST00000585315 CCDC102BQ68D86 513 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 FEZ1Q99689 392 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 STAMBPO95630 424 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 SSBP05455 408 aaKnown RBP eCLIP8.46□□□□□ -1.05
CDH8-214ENST00000585315 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.05
CDH8-214ENST00000585315 MPNDQ8N594 471 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.05
CDH8-214ENST00000585315 MAP3K12Q12852 859 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 TNIP1Q15025 636 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 ZKSCAN5Q9Y2L8 839 aa8.46□□□□□ -1.05
CDH8-214ENST00000585315 STARD3NLO95772 234 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 CCDC172P0C7W6 258 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 TRIM27P14373 513 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 GSTTP1A0A1W2PQM5 241 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 NUP88Q99567 741 aaPredicted RBP8.46□□□□□ -1.06
CDH8-214ENST00000585315 HYPKQ9NX55 129 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 TTC21BQ7Z4L5 1316 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 IFIT1P09914 478 aaKnown RBP8.46□□□□□ -1.06
CDH8-214ENST00000585315 CAMK4Q16566 473 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 KCNG4Q8TDN1 519 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 FSIP1Q8NA03 581 aa8.46□□□□□ -1.06
CDH8-214ENST00000585315 IDH1O75874 414 aaKnown RBP8.45□□□□□ -1.06
CDH8-214ENST00000585315 SSFA2P28290 1259 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 CBX1P83916 185 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 UBE2Q2Q8WVN8 375 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 TCP11L1Q9NUJ3 509 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 MTMR7Q9Y216 660 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 ESCO1Q5FWF5 840 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 TBC1D9Q6ZT07 1266 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
CDH8-214ENST00000585315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDH8-214ENST00000585315 A6NNZ2 444 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 TUBB8Q3ZCM7 444 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 A0A087WZG4 1122 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 KIF5BP33176 963 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 FAM69CQ0P6D2 419 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 TTF1Q15361 905 aaPredicted RBP8.45□□□□□ -1.06
CDH8-214ENST00000585315 STXBP4Q6ZWJ1 553 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 CCDC194A0A1B0GVG4 234 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 CEP112Q8N8E3 955 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 RMND1Q9NWS8 449 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 SLC12A7Q9Y666 1083 aa8.45□□□□□ -1.06
CDH8-214ENST00000585315 NF2P35240 595 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 RBM25P49756 843 aaKnown RBP8.44□□□□□ -1.06
CDH8-214ENST00000585315 CEP135Q66GS9 1140 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 SEPT11Q9NVA2 429 aaKnown RBP8.44□□□□□ -1.06
CDH8-214ENST00000585315 ZNF652Q9Y2D9 606 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 V9GYY5 206 aaPredicted RBP8.44□□□□□ -1.06
CDH8-214ENST00000585315 CCDC184Q52MB2 194 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 TTC21AQ8NDW8 1320 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 NBPF7P0C2Y1 421 aaPredicted RBP8.44□□□□□ -1.06
CDH8-214ENST00000585315 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 FAM135AQ9P2D6 1515 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 ZNF213O14771 459 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 C6orf163Q5TEZ5 329 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 ARFGAP2Q8N6H7 521 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 PPM1EQ8WY54 764 aa8.44□□□□□ -1.06
CDH8-214ENST00000585315 KLHL10Q6JEL2 608 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms