RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SCN11AQ9UI33 1791 aa25.02■■□□□ 1.6
TOP3A-220ENST00000585031 MTHFSP49914 203 aa25.01■■□□□ 1.59
TOP3A-220ENST00000585031 SLC34A2O95436 690 aa25■■□□□ 1.59
TOP3A-220ENST00000585031 DNAJC10Q8IXB1 793 aa24.99■■□□□ 1.59
TOP3A-220ENST00000585031 NFIXQ14938 502 aa24.98■■□□□ 1.59
TOP3A-220ENST00000585031 SOS1Q07889 1333 aaPredicted RBP24.97■■□□□ 1.59
TOP3A-220ENST00000585031 AMOTQ4VCS5 1084 aa24.97■■□□□ 1.59
TOP3A-220ENST00000585031 BCL2L12Q9HB09 334 aa24.97■■□□□ 1.59
TOP3A-220ENST00000585031 NFKBIEO00221 500 aa24.96■■□□□ 1.59
TOP3A-220ENST00000585031 VIRMAQ69YN4 1812 aaKnown RBP24.96■■□□□ 1.59
TOP3A-220ENST00000585031 CARMIL3Q8ND23 1372 aa24.94■■□□□ 1.58
TOP3A-220ENST00000585031 ZPR1O75312 459 aa24.94■■□□□ 1.58
TOP3A-220ENST00000585031 CREBZFQ9NS37 354 aa24.94■■□□□ 1.58
TOP3A-220ENST00000585031 DICER1Q9UPY3 1922 aaKnown RBP24.93■■□□□ 1.58
TOP3A-220ENST00000585031 CYP19A1P11511 503 aaPredicted RBP24.93■■□□□ 1.58
TOP3A-220ENST00000585031 C1orf141Q5JVX7 400 aa24.93■■□□□ 1.58
TOP3A-220ENST00000585031 ANKRD31Q8N7Z5 1873 aa24.93■■□□□ 1.58
TOP3A-220ENST00000585031 TTLL6Q8N841 843 aa24.92■■□□□ 1.58
TOP3A-220ENST00000585031 LGR6Q9HBX8 967 aa24.92■■□□□ 1.58
TOP3A-220ENST00000585031 PRDM10Q9NQV6 1147 aa24.92■■□□□ 1.58
TOP3A-220ENST00000585031 NARFQ9UHQ1 456 aa24.92■■□□□ 1.58
TOP3A-220ENST00000585031 SERPINB2P05120 415 aa24.91■■□□□ 1.58
TOP3A-220ENST00000585031 SLC39A6Q13433 755 aa24.91■■□□□ 1.58
TOP3A-220ENST00000585031 FOXN1O15353 648 aa24.9■■□□□ 1.58
TOP3A-220ENST00000585031 SULT6B1Q6IMI4 303 aa24.9■■□□□ 1.58
TOP3A-220ENST00000585031 DPY19L2Q6NUT2 758 aa24.9■■□□□ 1.58
TOP3A-220ENST00000585031 C2CD5Q86YS7 1000 aa24.9■■□□□ 1.58
TOP3A-220ENST00000585031 ZBTB1Q9Y2K1 713 aa24.9■■□□□ 1.58
TOP3A-220ENST00000585031 FER1L6Q2WGJ9 1857 aa24.89■■□□□ 1.58
TOP3A-220ENST00000585031 POLR3GLQ9BT43 218 aa24.89■■□□□ 1.58
TOP3A-220ENST00000585031 MKRN1Q9UHC7 482 aaKnown RBP24.89■■□□□ 1.58
TOP3A-220ENST00000585031 COL15A1P39059 1388 aa24.89■■□□□ 1.57
TOP3A-220ENST00000585031 POTEIP0CG38 1075 aa24.88■■□□□ 1.57
TOP3A-220ENST00000585031 POTEJP0CG39 1038 aa24.88■■□□□ 1.57
TOP3A-220ENST00000585031 SLC52A2Q9HAB3 445 aa24.87■■□□□ 1.57
TOP3A-220ENST00000585031 COL11A2P13942 1736 aaPredicted RBP24.86■■□□□ 1.57
TOP3A-220ENST00000585031 CHADLQ6NUI6 762 aa24.86■■□□□ 1.57
TOP3A-220ENST00000585031 IL13P35225 146 aa24.84■■□□□ 1.57
TOP3A-220ENST00000585031 ZNF219Q9P2Y4 722 aaPredicted RBP24.84■■□□□ 1.57
TOP3A-220ENST00000585031 MRC1P22897 1456 aa24.83■■□□□ 1.57
TOP3A-220ENST00000585031 H0YIN7 160 aa24.83■■□□□ 1.57
TOP3A-220ENST00000585031 CCDC24Q8N4L8 307 aa24.83■■□□□ 1.57
TOP3A-220ENST00000585031 PANK3Q9H999 370 aa24.83■■□□□ 1.57
TOP3A-220ENST00000585031 CNTNAP1P78357 1384 aa24.82■■□□□ 1.56
TOP3A-220ENST00000585031 RNMTO43148 476 aaKnown RBP24.82■■□□□ 1.56
TOP3A-220ENST00000585031 AKAP4Q5JQC9 854 aa24.82■■□□□ 1.56
TOP3A-220ENST00000585031 BICDL1Q6ZP65 573 aa24.82■■□□□ 1.56
TOP3A-220ENST00000585031 CACNA1SQ13698 1873 aa24.81■■□□□ 1.56
TOP3A-220ENST00000585031 UBR2Q8IWV8 1755 aa24.81■■□□□ 1.56
TOP3A-220ENST00000585031 C21orf2O43822 256 aa24.81■■□□□ 1.56
TOP3A-220ENST00000585031 CTCFP49711 727 aaPredicted RBP24.81■■□□□ 1.56
TOP3A-220ENST00000585031 SLX4Q8IY92 1834 aa24.81■■□□□ 1.56
TOP3A-220ENST00000585031 ERFEQ4G0M1 354 aa24.8■■□□□ 1.56
TOP3A-220ENST00000585031 CANXP27824 592 aaKnown RBP24.79■■□□□ 1.56
TOP3A-220ENST00000585031 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
TOP3A-220ENST00000585031 TBC1D9BQ66K14 1250 aa24.79■■□□□ 1.56
TOP3A-220ENST00000585031 ZNF622Q969S3 477 aaKnown RBP eCLIP24.79■■□□□ 1.56
TOP3A-220ENST00000585031 PASKQ96RG2 1323 aa24.79■■□□□ 1.56
TOP3A-220ENST00000585031 DDNO94850 711 aaPredicted RBP24.78■■□□□ 1.56
TOP3A-220ENST00000585031 WBP1LQ9NX94 342 aa24.78■■□□□ 1.56
TOP3A-220ENST00000585031 VEGFBP49765 207 aa24.77■■□□□ 1.56
TOP3A-220ENST00000585031 EIF5P55010 431 aaKnown RBP24.77■■□□□ 1.56
TOP3A-220ENST00000585031 MORC1Q86VD1 984 aa24.77■■□□□ 1.56
TOP3A-220ENST00000585031 PRR5LQ6MZQ0 368 aa24.75■■□□□ 1.55
TOP3A-220ENST00000585031 LTBP3Q9NS15 1303 aa24.75■■□□□ 1.55
TOP3A-220ENST00000585031 VSIG10Q8N0Z9 540 aa24.74■■□□□ 1.55
TOP3A-220ENST00000585031 AIDAQ96BJ3 306 aa24.74■■□□□ 1.55
TOP3A-220ENST00000585031 BRIP1Q9BX63 1249 aa24.74■■□□□ 1.55
TOP3A-220ENST00000585031 PDZRN3Q9UPQ7 1066 aa24.74■■□□□ 1.55
TOP3A-220ENST00000585031 SCN7AQ01118 1682 aa24.74■■□□□ 1.55
TOP3A-220ENST00000585031 LBX1P52954 281 aa24.73■■□□□ 1.55
TOP3A-220ENST00000585031 ITGBL1O95965 494 aaPredicted RBP24.72■■□□□ 1.55
TOP3A-220ENST00000585031 HMOX1P09601 288 aa24.72■■□□□ 1.55
TOP3A-220ENST00000585031 MTHFSDQ2M296 383 aaKnown RBP24.72■■□□□ 1.55
TOP3A-220ENST00000585031 LDHDQ86WU2 507 aa24.72■■□□□ 1.55
TOP3A-220ENST00000585031 TMEM88BA6NKF7 163 aa24.71■■□□□ 1.55
TOP3A-220ENST00000585031 FAM161AQ3B820 660 aa24.71■■□□□ 1.55
TOP3A-220ENST00000585031 ABHD8Q96I13 439 aa24.71■■□□□ 1.55
TOP3A-220ENST00000585031 TBC1D2BQ9UPU7 963 aa24.71■■□□□ 1.55
TOP3A-220ENST00000585031 ARFGEF2Q9Y6D5 1785 aa24.71■■□□□ 1.55
TOP3A-220ENST00000585031 PDE6BP35913 854 aa24.7■■□□□ 1.54
TOP3A-220ENST00000585031 PCDH10Q9P2E7 1040 aa24.7■■□□□ 1.54
TOP3A-220ENST00000585031 SCN4AP35499 1836 aa24.7■■□□□ 1.54
TOP3A-220ENST00000585031 L3MBTL3Q96JM7 780 aaPredicted RBP24.69■■□□□ 1.54
TOP3A-220ENST00000585031 TAOK3Q9H2K8 898 aa24.69■■□□□ 1.54
TOP3A-220ENST00000585031 TAF1DQ9H5J8 278 aaPredicted RBP24.69■■□□□ 1.54
TOP3A-220ENST00000585031 IQCA1LA6NCM1 817 aa24.68■■□□□ 1.54
TOP3A-220ENST00000585031 ZNF496Q96IT1 587 aaPredicted RBP24.68■■□□□ 1.54
TOP3A-220ENST00000585031 PCGF6Q9BYE7 350 aa24.68■■□□□ 1.54
TOP3A-220ENST00000585031 HSPA8P11142 646 aaKnown RBP24.67■■□□□ 1.54
TOP3A-220ENST00000585031 HSPA5P11021 654 aaKnown RBP24.66■■□□□ 1.54
TOP3A-220ENST00000585031 PRPF40BQ6NWY9 871 aaKnown RBP24.66■■□□□ 1.54
TOP3A-220ENST00000585031 SIPA1L3O60292 1781 aaPredicted RBP24.66■■□□□ 1.54
TOP3A-220ENST00000585031 ADAMTSL1Q8N6G6 1762 aa24.65■■□□□ 1.54
TOP3A-220ENST00000585031 A0A087WZG4 1122 aa24.65■■□□□ 1.54
TOP3A-220ENST00000585031 STARD3NLO95772 234 aa24.65■■□□□ 1.54
TOP3A-220ENST00000585031 SRGNP10124 158 aa24.65■■□□□ 1.54
TOP3A-220ENST00000585031 RGS19P49795 217 aa24.65■■□□□ 1.54
TOP3A-220ENST00000585031 C7orf43Q8WVR3 580 aa24.65■■□□□ 1.54
TOP3A-220ENST00000585031 RASSF10A6NK89 507 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms