RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 KDM3BQ7LBC6 1761 aa22.16■■□□□ 1.14
CSNK1D-225ENST00000584913 A0A087WZG4 1122 aa22.15■■□□□ 1.14
CSNK1D-225ENST00000584913 LMOD3Q0VAK6 560 aa22.15■■□□□ 1.14
CSNK1D-225ENST00000584913 NLGN2Q8NFZ4 835 aa22.15■■□□□ 1.14
CSNK1D-225ENST00000584913 NARFQ9UHQ1 456 aa22.15■■□□□ 1.14
CSNK1D-225ENST00000584913 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
CSNK1D-225ENST00000584913 KLHL34Q8N239 644 aa22.14■■□□□ 1.13
CSNK1D-225ENST00000584913 SCN7AQ01118 1682 aa22.14■■□□□ 1.13
CSNK1D-225ENST00000584913 ZPR1O75312 459 aa22.13■■□□□ 1.13
CSNK1D-225ENST00000584913 EIF5P55010 431 aaKnown RBP22.13■■□□□ 1.13
CSNK1D-225ENST00000584913 BABAM1Q9NWV8 329 aa22.13■■□□□ 1.13
CSNK1D-225ENST00000584913 LAMB4A4D0S4 1761 aa22.12■■□□□ 1.13
CSNK1D-225ENST00000584913 SNRPA1P09661 255 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-225ENST00000584913 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
CSNK1D-225ENST00000584913 PARP3Q9Y6F1 533 aa22.12■■□□□ 1.13
CSNK1D-225ENST00000584913 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
CSNK1D-225ENST00000584913 RGL2O15211 777 aa22.11■■□□□ 1.13
CSNK1D-225ENST00000584913 GRIN3BO60391 1043 aa22.11■■□□□ 1.13
CSNK1D-225ENST00000584913 TGFB2P61812 414 aa22.11■■□□□ 1.13
CSNK1D-225ENST00000584913 KIAA1551Q9HCM1 1747 aa22.11■■□□□ 1.13
CSNK1D-225ENST00000584913 CHD4Q14839 1912 aa22.1■■□□□ 1.13
CSNK1D-225ENST00000584913 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
CSNK1D-225ENST00000584913 GPR162Q16538 588 aa22.1■■□□□ 1.13
CSNK1D-225ENST00000584913 NRXN2Q9P2S2 1712 aa22.1■■□□□ 1.13
CSNK1D-225ENST00000584913 TM4SF1P30408 202 aa22.09■■□□□ 1.13
CSNK1D-225ENST00000584913 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
CSNK1D-225ENST00000584913 SRP68Q9UHB9 627 aaKnown RBP22.09■■□□□ 1.13
CSNK1D-225ENST00000584913 YY1P25490 414 aa22.08■■□□□ 1.13
CSNK1D-225ENST00000584913 TMPOP42166 694 aaKnown RBP22.08■■□□□ 1.13
CSNK1D-225ENST00000584913 FKBP8Q14318 412 aa22.08■■□□□ 1.13
CSNK1D-225ENST00000584913 PXDNLA1KZ92 1463 aa22.08■■□□□ 1.12
CSNK1D-225ENST00000584913 KCNQ3O43525 872 aa22.07■■□□□ 1.12
CSNK1D-225ENST00000584913 CANXP27824 592 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-225ENST00000584913 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
CSNK1D-225ENST00000584913 BCORQ6W2J9 1755 aa22.07■■□□□ 1.12
CSNK1D-225ENST00000584913 POLRMTO00411 1230 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-225ENST00000584913 RIPK4P57078 832 aa22.05■■□□□ 1.12
CSNK1D-225ENST00000584913 NPM2Q86SE8 214 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-225ENST00000584913 UTRNP46939 3433 aa22.04■■□□□ 1.12
CSNK1D-225ENST00000584913 DDR1Q08345 913 aa22.04■■□□□ 1.12
CSNK1D-225ENST00000584913 BCL2L12Q9HB09 334 aa22.04■■□□□ 1.12
CSNK1D-225ENST00000584913 USP16Q9Y5T5 823 aa22.04■■□□□ 1.12
CSNK1D-225ENST00000584913 ERBB4Q15303 1308 aa22.03■■□□□ 1.12
CSNK1D-225ENST00000584913 YBX3P16989 372 aaKnown RBP eCLIP22.02■■□□□ 1.125e-7■□□□□ 9.2
CSNK1D-225ENST00000584913 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
CSNK1D-225ENST00000584913 ADAMTS8Q9UP79 889 aa22.02■■□□□ 1.12
CSNK1D-225ENST00000584913 BRCA1P38398 1863 aaKnown RBP22.02■■□□□ 1.12
CSNK1D-225ENST00000584913 GIGYF1O75420 1035 aaPredicted RBP22.01■■□□□ 1.11
CSNK1D-225ENST00000584913 A1BGP04217 495 aa22.01■■□□□ 1.11
CSNK1D-225ENST00000584913 NFIXQ14938 502 aa22.01■■□□□ 1.11
CSNK1D-225ENST00000584913 CLEC4GQ6UXB4 293 aa22.01■■□□□ 1.11
CSNK1D-225ENST00000584913 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
CSNK1D-225ENST00000584913 AFDNP55196 1824 aaKnown RBP21.99■■□□□ 1.11
CSNK1D-225ENST00000584913 PELP1Q8IZL8 1130 aaKnown RBP21.99■■□□□ 1.11
CSNK1D-225ENST00000584913 CAMTA2O94983 1202 aa21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 DZIP3Q86Y13 1208 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 PDZRN3Q9UPQ7 1066 aa21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 ZNF652Q9Y2D9 606 aa21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 GOLGB1Q14789 3259 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-225ENST00000584913 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
CSNK1D-225ENST00000584913 PRAMEF22A3QJZ6 481 aa21.97■■□□□ 1.11
CSNK1D-225ENST00000584913 DLEC1Q9Y238 1755 aa21.97■■□□□ 1.11
CSNK1D-225ENST00000584913 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
CSNK1D-225ENST00000584913 SERPINB2P05120 415 aa21.96■■□□□ 1.11
CSNK1D-225ENST00000584913 CCDC146Q8IYE0 955 aa21.96■■□□□ 1.11
CSNK1D-225ENST00000584913 MIS18AQ9NYP9 233 aa21.96■■□□□ 1.11
CSNK1D-225ENST00000584913 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
CSNK1D-225ENST00000584913 NBPF26B4DH59 902 aa21.95■■□□□ 1.1
CSNK1D-225ENST00000584913 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-225ENST00000584913 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.1
CSNK1D-225ENST00000584913 NBPF15Q8N660 670 aa21.95■■□□□ 1.1
CSNK1D-225ENST00000584913 TBC1D2BQ9UPU7 963 aa21.95■■□□□ 1.1
CSNK1D-225ENST00000584913 CHL1O00533 1208 aa21.94■■□□□ 1.1
CSNK1D-225ENST00000584913 ANP32CO43423 234 aa21.94■■□□□ 1.1
CSNK1D-225ENST00000584913 CALD1Q05682 793 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-225ENST00000584913 ZNF330Q9Y3S2 320 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-225ENST00000584913 DPEP1P16444 411 aa21.93■■□□□ 1.1
CSNK1D-225ENST00000584913 TBC1D9BQ66K14 1250 aa21.93■■□□□ 1.1
CSNK1D-225ENST00000584913 PIM2Q9P1W9 311 aa21.93■■□□□ 1.1
CSNK1D-225ENST00000584913 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
CSNK1D-225ENST00000584913 ERVV-1B6SEH8 477 aa21.92■■□□□ 1.1
CSNK1D-225ENST00000584913 HOXB7P09629 217 aa21.92■■□□□ 1.1
CSNK1D-225ENST00000584913 KCNA3P22001 575 aa21.92■■□□□ 1.1
CSNK1D-225ENST00000584913 SETDB2Q96T68 719 aa21.92■■□□□ 1.1
CSNK1D-225ENST00000584913 ADCY9O60503 1353 aa21.91■■□□□ 1.1
CSNK1D-225ENST00000584913 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
CSNK1D-225ENST00000584913 RRP7AQ9Y3A4 280 aaKnown RBP21.91■■□□□ 1.1
CSNK1D-225ENST00000584913 ATP10DQ9P241 1426 aa21.89■■□□□ 1.1
CSNK1D-225ENST00000584913 NEUROD2Q15784 382 aa21.89■■□□□ 1.09
CSNK1D-225ENST00000584913 ZNF784Q8NCA9 323 aaPredicted RBP21.89■■□□□ 1.09
CSNK1D-225ENST00000584913 BRIP1Q9BX63 1249 aa21.89■■□□□ 1.09
CSNK1D-225ENST00000584913 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
CSNK1D-225ENST00000584913 PDE6BP35913 854 aa21.88■■□□□ 1.09
CSNK1D-225ENST00000584913 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
CSNK1D-225ENST00000584913 BCS1LQ9Y276 419 aa21.88■■□□□ 1.09
CSNK1D-225ENST00000584913 ANKRD31Q8N7Z5 1873 aa21.88■■□□□ 1.09
CSNK1D-225ENST00000584913 MAP3K15Q6ZN16 1313 aa21.87■■□□□ 1.09
CSNK1D-225ENST00000584913 APAF1O14727 1248 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms