RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 ZBTB1Q9Y2K1 713 aa31.06■■■□□ 2.56
TRAPPC8-213ENST00000584876 COL3A1P02461 1466 aaPredicted RBP31.06■■■□□ 2.56
TRAPPC8-213ENST00000584876 CHRNA5P30532 468 aa31.05■■■□□ 2.56
TRAPPC8-213ENST00000584876 NRXN2Q9P2S2 1712 aa31.04■■■□□ 2.56
TRAPPC8-213ENST00000584876 C9orf131Q5VYM1 1079 aa31.04■■■□□ 2.56
TRAPPC8-213ENST00000584876 NARFQ9UHQ1 456 aa31.04■■■□□ 2.56
TRAPPC8-213ENST00000584876 VSIG10Q8N0Z9 540 aa31.03■■■□□ 2.56
TRAPPC8-213ENST00000584876 SBF1O95248 1867 aa31.03■■■□□ 2.56
TRAPPC8-213ENST00000584876 CNGB1Q14028 1251 aaPredicted RBP31.02■■■□□ 2.56
TRAPPC8-213ENST00000584876 NPC1L1Q9UHC9 1359 aa31.02■■■□□ 2.56
TRAPPC8-213ENST00000584876 NFIXQ14938 502 aa31.01■■■□□ 2.55
TRAPPC8-213ENST00000584876 NMRK2Q9NPI5 230 aa31.01■■■□□ 2.55
TRAPPC8-213ENST00000584876 SIPA1L3O60292 1781 aaPredicted RBP31■■■□□ 2.55
TRAPPC8-213ENST00000584876 DLEC1Q9Y238 1755 aa31■■■□□ 2.55
TRAPPC8-213ENST00000584876 TOMM70O94826 608 aa31■■■□□ 2.55
TRAPPC8-213ENST00000584876 TTC5Q8N0Z6 440 aa31■■■□□ 2.55
TRAPPC8-213ENST00000584876 U2SURPO15042 1029 aaKnown RBP30.99■■■□□ 2.55
TRAPPC8-213ENST00000584876 CANXP27824 592 aaKnown RBP30.97■■■□□ 2.55
TRAPPC8-213ENST00000584876 BCL2L12Q9HB09 334 aa30.97■■■□□ 2.55
TRAPPC8-213ENST00000584876 RNF181Q9P0P0 153 aa30.97■■■□□ 2.55
TRAPPC8-213ENST00000584876 GAS2L2Q8NHY3 880 aa30.96■■■□□ 2.55
TRAPPC8-213ENST00000584876 TEFQ10587 303 aa30.95■■■□□ 2.55
TRAPPC8-213ENST00000584876 GNAT3A8MTJ3 354 aa30.94■■■□□ 2.54
TRAPPC8-213ENST00000584876 STARD3NLO95772 234 aa30.94■■■□□ 2.54
TRAPPC8-213ENST00000584876 SERPINB2P05120 415 aa30.94■■■□□ 2.54
TRAPPC8-213ENST00000584876 APLP1P51693 650 aa30.93■■■□□ 2.54
TRAPPC8-213ENST00000584876 SCN7AQ01118 1682 aa30.93■■■□□ 2.54
TRAPPC8-213ENST00000584876 IL17REQ8NFR9 667 aa30.92■■■□□ 2.54
TRAPPC8-213ENST00000584876 TNRC6CQ9HCJ0 1690 aaKnown RBP30.92■■■□□ 2.54
TRAPPC8-213ENST00000584876 HEG1Q9ULI3 1381 aa30.92■■■□□ 2.54
TRAPPC8-213ENST00000584876 EIF5P55010 431 aaKnown RBP30.91■■■□□ 2.54
TRAPPC8-213ENST00000584876 ZNF790Q6PG37 636 aa30.91■■■□□ 2.54
TRAPPC8-213ENST00000584876 ZNF496Q96IT1 587 aaPredicted RBP30.91■■■□□ 2.54
TRAPPC8-213ENST00000584876 KDM2BQ8NHM5 1336 aa30.91■■■□□ 2.54
TRAPPC8-213ENST00000584876 C16orf71Q8IYS4 520 aaPredicted RBP30.9■■■□□ 2.54
TRAPPC8-213ENST00000584876 A0A087WZG4 1122 aa30.89■■■□□ 2.54
TRAPPC8-213ENST00000584876 RBM46Q8TBY0 533 aaKnown RBP30.89■■■□□ 2.54
TRAPPC8-213ENST00000584876 CARMIL3Q8ND23 1372 aa30.89■■■□□ 2.54
TRAPPC8-213ENST00000584876 CCDC88AQ3V6T2 1871 aa30.89■■■□□ 2.53
TRAPPC8-213ENST00000584876 WDR90Q96KV7 1748 aa30.88■■■□□ 2.53
TRAPPC8-213ENST00000584876 RASSF7Q02833 373 aa30.88■■■□□ 2.53
TRAPPC8-213ENST00000584876 IFFO2Q5TF58 517 aa30.88■■■□□ 2.53
TRAPPC8-213ENST00000584876 BICDL1Q6ZP65 573 aa30.88■■■□□ 2.53
TRAPPC8-213ENST00000584876 ANKRD31Q8N7Z5 1873 aa30.88■■■□□ 2.53
TRAPPC8-213ENST00000584876 TEX13AQ9BXU3 409 aaPredicted RBP30.87■■■□□ 2.53
TRAPPC8-213ENST00000584876 C2CD5Q86YS7 1000 aa30.86■■■□□ 2.53
TRAPPC8-213ENST00000584876 ZNF330Q9Y3S2 320 aaPredicted RBP30.86■■■□□ 2.53
TRAPPC8-213ENST00000584876 CEMIPQ8WUJ3 1361 aa30.85■■■□□ 2.53
TRAPPC8-213ENST00000584876 TTLL6Q8N841 843 aa30.85■■■□□ 2.53
TRAPPC8-213ENST00000584876 CFAP53Q96M91 514 aa30.84■■■□□ 2.53
TRAPPC8-213ENST00000584876 FMNL2Q96PY5 1086 aa30.84■■■□□ 2.53
TRAPPC8-213ENST00000584876 TIAM2Q8IVF5 1701 aa30.84■■■□□ 2.53
TRAPPC8-213ENST00000584876 H0YIN7 160 aa30.83■■■□□ 2.53
TRAPPC8-213ENST00000584876 PRKAR2BP31323 418 aa30.83■■■□□ 2.53
TRAPPC8-213ENST00000584876 TBC1D9BQ66K14 1250 aa30.83■■■□□ 2.53
TRAPPC8-213ENST00000584876 ZC3H4Q9UPT8 1303 aaKnown RBP30.82■■■□□ 2.52
TRAPPC8-213ENST00000584876 PHACTR3Q96KR7 559 aa30.82■■■□□ 2.52
TRAPPC8-213ENST00000584876 RRAGCQ9HB90 399 aa30.82■■■□□ 2.52
TRAPPC8-213ENST00000584876 COL11A2P13942 1736 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC8-213ENST00000584876 IL6STP40189 918 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC8-213ENST00000584876 RSPH6AQ9H0K4 717 aa30.81■■■□□ 2.52
TRAPPC8-213ENST00000584876 TBC1D2BQ9UPU7 963 aa30.81■■■□□ 2.52
TRAPPC8-213ENST00000584876 BCORQ6W2J9 1755 aa30.81■■■□□ 2.52
TRAPPC8-213ENST00000584876 LMNB1P20700 586 aa30.8■■■□□ 2.52
TRAPPC8-213ENST00000584876 FSTL1Q12841 308 aa30.79■■■□□ 2.52
TRAPPC8-213ENST00000584876 BTBD11A6QL63 1104 aa30.78■■■□□ 2.52
TRAPPC8-213ENST00000584876 A1BGP04217 495 aa30.78■■■□□ 2.52
TRAPPC8-213ENST00000584876 NPM2Q86SE8 214 aaKnown RBP30.78■■■□□ 2.52
TRAPPC8-213ENST00000584876 DNAJC5GQ8N7S2 189 aa30.78■■■□□ 2.52
TRAPPC8-213ENST00000584876 KCNQ3O43525 872 aa30.77■■■□□ 2.52
TRAPPC8-213ENST00000584876 PRELPP51888 382 aa30.77■■■□□ 2.52
TRAPPC8-213ENST00000584876 NUDCQ9Y266 331 aa30.77■■■□□ 2.52
TRAPPC8-213ENST00000584876 CACNA1SQ13698 1873 aa30.76■■■□□ 2.52
TRAPPC8-213ENST00000584876 PRR5LQ6MZQ0 368 aa30.76■■■□□ 2.51
TRAPPC8-213ENST00000584876 PDE6BP35913 854 aa30.75■■■□□ 2.51
TRAPPC8-213ENST00000584876 ZNF622Q969S3 477 aaKnown RBP eCLIP30.75■■■□□ 2.512e-8■■□□□ 13
TRAPPC8-213ENST00000584876 BRIP1Q9BX63 1249 aa30.75■■■□□ 2.51
TRAPPC8-213ENST00000584876 PDZRN3Q9UPQ7 1066 aa30.75■■■□□ 2.51
TRAPPC8-213ENST00000584876 FER1L6Q2WGJ9 1857 aa30.74■■■□□ 2.51
TRAPPC8-213ENST00000584876 NFKBIEO00221 500 aa30.74■■■□□ 2.51
TRAPPC8-213ENST00000584876 CCDC24Q8N4L8 307 aa30.74■■■□□ 2.51
TRAPPC8-213ENST00000584876 DICER1Q9UPY3 1922 aaKnown RBP30.73■■■□□ 2.51
TRAPPC8-213ENST00000584876 CAMTA2O94983 1202 aa30.73■■■□□ 2.51
TRAPPC8-213ENST00000584876 U2AF1L5P0DN76 240 aaPredicted RBP30.73■■■□□ 2.51
TRAPPC8-213ENST00000584876 U2AF1Q01081 240 aaKnown RBP eCLIP30.73■■■□□ 2.514e-6■□□□□ 8.3
TRAPPC8-213ENST00000584876 GLTPD2A6NH11 291 aa30.72■■■□□ 2.51
TRAPPC8-213ENST00000584876 SETDB2Q96T68 719 aa30.72■■■□□ 2.51
TRAPPC8-213ENST00000584876 NPHP1O15259 732 aa30.71■■■□□ 2.51
TRAPPC8-213ENST00000584876 PPP2R1AP30153 589 aa30.71■■■□□ 2.51
TRAPPC8-213ENST00000584876 HTRA3P83110 453 aa30.71■■■□□ 2.51
TRAPPC8-213ENST00000584876 DZIP3Q86Y13 1208 aaKnown RBP30.71■■■□□ 2.51
TRAPPC8-213ENST00000584876 CNBD1Q8NA66 436 aa30.71■■■□□ 2.51
TRAPPC8-213ENST00000584876 RTF1Q92541 710 aaKnown RBP30.71■■■□□ 2.51
TRAPPC8-213ENST00000584876 ARFGEF2Q9Y6D5 1785 aa30.7■■■□□ 2.51
TRAPPC8-213ENST00000584876 SMC1BQ8NDV3 1235 aa30.7■■■□□ 2.51
TRAPPC8-213ENST00000584876 USP16Q9Y5T5 823 aa30.7■■■□□ 2.51
TRAPPC8-213ENST00000584876 MCM10Q7L590 875 aa30.69■■■□□ 2.5
TRAPPC8-213ENST00000584876 ZNF219Q9P2Y4 722 aaPredicted RBP30.69■■■□□ 2.5
TRAPPC8-213ENST00000584876 SLX4Q8IY92 1834 aa30.68■■■□□ 2.5
TRAPPC8-213ENST00000584876 C21orf2O43822 256 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms