RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 C10orf71Q711Q0 1435 aa24■■□□□ 1.43
SRSF1-208ENST00000584773 COL15A1P39059 1388 aa23.99■■□□□ 1.43
SRSF1-208ENST00000584773 DDR1Q08345 913 aa23.99■■□□□ 1.43
SRSF1-208ENST00000584773 RTF1Q92541 710 aaKnown RBP23.99■■□□□ 1.43
SRSF1-208ENST00000584773 PXDNLA1KZ92 1463 aa23.99■■□□□ 1.43
SRSF1-208ENST00000584773 PLEKHF1Q96S99 279 aa23.98■■□□□ 1.43
SRSF1-208ENST00000584773 PARP3Q9Y6F1 533 aa23.98■■□□□ 1.43
SRSF1-208ENST00000584773 ZNF784Q8NCA9 323 aaPredicted RBP23.97■■□□□ 1.43
SRSF1-208ENST00000584773 PRAMEF22A3QJZ6 481 aa23.96■■□□□ 1.43
SRSF1-208ENST00000584773 RALBP1Q15311 655 aa23.96■■□□□ 1.43
SRSF1-208ENST00000584773 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
SRSF1-208ENST00000584773 ZPR1O75312 459 aa23.95■■□□□ 1.42
SRSF1-208ENST00000584773 A0A0G2JLW4 131 aa23.94■■□□□ 1.42
SRSF1-208ENST00000584773 GRIN3BO60391 1043 aa23.94■■□□□ 1.42
SRSF1-208ENST00000584773 STARD3NLO95772 234 aa23.94■■□□□ 1.42
SRSF1-208ENST00000584773 BCL2L12Q9HB09 334 aa23.94■■□□□ 1.42
SRSF1-208ENST00000584773 A1BGP04217 495 aa23.93■■□□□ 1.42
SRSF1-208ENST00000584773 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
SRSF1-208ENST00000584773 POLRMTO00411 1230 aaKnown RBP23.92■■□□□ 1.42
SRSF1-208ENST00000584773 PIP4K2AP48426 406 aaPredicted RBP23.92■■□□□ 1.42
SRSF1-208ENST00000584773 EIF5P55010 431 aaKnown RBP23.92■■□□□ 1.42
SRSF1-208ENST00000584773 THUMPD2Q9BTF0 503 aaKnown RBP23.92■■□□□ 1.42
SRSF1-208ENST00000584773 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
SRSF1-208ENST00000584773 ZNF330Q9Y3S2 320 aaPredicted RBP23.92■■□□□ 1.42
SRSF1-208ENST00000584773 AFDNP55196 1824 aaKnown RBP23.92■■□□□ 1.42
SRSF1-208ENST00000584773 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
SRSF1-208ENST00000584773 DPEP1P16444 411 aa23.91■■□□□ 1.42
SRSF1-208ENST00000584773 TM4SF1P30408 202 aa23.91■■□□□ 1.42
SRSF1-208ENST00000584773 USP16Q9Y5T5 823 aa23.91■■□□□ 1.42
SRSF1-208ENST00000584773 MYBBP1AQ9BQG0 1328 aaKnown RBP23.91■■□□□ 1.42
SRSF1-208ENST00000584773 NFIXQ14938 502 aa23.9■■□□□ 1.42
SRSF1-208ENST00000584773 NFE2L2Q16236 605 aa23.9■■□□□ 1.42
SRSF1-208ENST00000584773 BRCA1P38398 1863 aaKnown RBP23.9■■□□□ 1.42
SRSF1-208ENST00000584773 NEFMP07197 916 aa23.89■■□□□ 1.42
SRSF1-208ENST00000584773 TEX13AQ9BXU3 409 aaPredicted RBP23.89■■□□□ 1.42
SRSF1-208ENST00000584773 SCN7AQ01118 1682 aa23.89■■□□□ 1.41
SRSF1-208ENST00000584773 TGFB2P61812 414 aa23.88■■□□□ 1.41
SRSF1-208ENST00000584773 MAPK8IP3Q9UPT6 1336 aa23.88■■□□□ 1.41
SRSF1-208ENST00000584773 KDM3BQ7LBC6 1761 aa23.87■■□□□ 1.41
SRSF1-208ENST00000584773 TAF7Q15545 349 aaPredicted RBP23.87■■□□□ 1.41
SRSF1-208ENST00000584773 TBC1D2BQ9UPU7 963 aa23.87■■□□□ 1.41
SRSF1-208ENST00000584773 BICDL1Q6ZP65 573 aa23.86■■□□□ 1.41
SRSF1-208ENST00000584773 BCS1LQ9Y276 419 aa23.86■■□□□ 1.41
SRSF1-208ENST00000584773 NRXN2Q9P2S2 1712 aa23.85■■□□□ 1.41
SRSF1-208ENST00000584773 KCNA3P22001 575 aa23.85■■□□□ 1.41
SRSF1-208ENST00000584773 SNRPA1P09661 255 aaKnown RBP23.84■■□□□ 1.41
SRSF1-208ENST00000584773 CHRNA5P30532 468 aa23.84■■□□□ 1.41
SRSF1-208ENST00000584773 IL6STP40189 918 aaPredicted RBP23.84■■□□□ 1.41
SRSF1-208ENST00000584773 A0A087WZG4 1122 aa23.84■■□□□ 1.41
SRSF1-208ENST00000584773 TBC1D9BQ66K14 1250 aa23.84■■□□□ 1.41
SRSF1-208ENST00000584773 CCDC146Q8IYE0 955 aa23.84■■□□□ 1.41
SRSF1-208ENST00000584773 CARMIL3Q8ND23 1372 aa23.83■■□□□ 1.41
SRSF1-208ENST00000584773 BCORQ6W2J9 1755 aa23.83■■□□□ 1.4
SRSF1-208ENST00000584773 SERPINB2P05120 415 aa23.83■■□□□ 1.4
SRSF1-208ENST00000584773 LAMB4A4D0S4 1761 aa23.82■■□□□ 1.4
SRSF1-208ENST00000584773 PNNQ9H307 717 aaKnown RBP23.82■■□□□ 1.4
SRSF1-208ENST00000584773 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
SRSF1-208ENST00000584773 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
SRSF1-208ENST00000584773 NBPF26B4DH59 902 aa23.81■■□□□ 1.4
SRSF1-208ENST00000584773 CAMTA2O94983 1202 aa23.81■■□□□ 1.4
SRSF1-208ENST00000584773 NBPF10Q6P3W6 841 aaKnown RBP23.81■■□□□ 1.4
SRSF1-208ENST00000584773 NBPF15Q8N660 670 aa23.81■■□□□ 1.4
SRSF1-208ENST00000584773 RIPK4P57078 832 aa23.8■■□□□ 1.4
SRSF1-208ENST00000584773 DZIP3Q86Y13 1208 aaKnown RBP23.8■■□□□ 1.4
SRSF1-208ENST00000584773 ATP10DQ9P241 1426 aa23.79■■□□□ 1.4
SRSF1-208ENST00000584773 TMPOP42166 694 aaKnown RBP23.79■■□□□ 1.4
SRSF1-208ENST00000584773 CCDC24Q8N4L8 307 aa23.79■■□□□ 1.4
SRSF1-208ENST00000584773 ARFGEF1Q9Y6D6 1849 aa23.78■■□□□ 1.4
SRSF1-208ENST00000584773 ADCY9O60503 1353 aa23.78■■□□□ 1.4
SRSF1-208ENST00000584773 ANKRD31Q8N7Z5 1873 aa23.78■■□□□ 1.4
SRSF1-208ENST00000584773 EIF4A1P60842 406 aaKnown RBP23.77■■□□□ 1.4
SRSF1-208ENST00000584773 PNISRQ8TF01 805 aaKnown RBP23.77■■□□□ 1.4
SRSF1-208ENST00000584773 PIM2Q9P1W9 311 aa23.77■■□□□ 1.4
SRSF1-208ENST00000584773 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
SRSF1-208ENST00000584773 NEUROD2Q15784 382 aa23.76■■□□□ 1.39
SRSF1-208ENST00000584773 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
SRSF1-208ENST00000584773 ADAMTS8Q9UP79 889 aa23.76■■□□□ 1.39
SRSF1-208ENST00000584773 DLEC1Q9Y238 1755 aa23.75■■□□□ 1.39
SRSF1-208ENST00000584773 ARHGAP27Q6ZUM4 889 aa23.75■■□□□ 1.39
SRSF1-208ENST00000584773 GIGYF1O75420 1035 aaPredicted RBP23.74■■□□□ 1.39
SRSF1-208ENST00000584773 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
SRSF1-208ENST00000584773 DALRD3Q5D0E6 543 aaKnown RBP23.74■■□□□ 1.39
SRSF1-208ENST00000584773 ZNF526Q8TF50 670 aaPredicted RBP23.74■■□□□ 1.39
SRSF1-208ENST00000584773 PRR5LQ6MZQ0 368 aa23.73■■□□□ 1.39
SRSF1-208ENST00000584773 TSPYL4Q9UJ04 414 aa23.73■■□□□ 1.39
SRSF1-208ENST00000584773 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
SRSF1-208ENST00000584773 NGEFQ8N5V2 710 aa23.72■■□□□ 1.39
SRSF1-208ENST00000584773 C2CD5Q86YS7 1000 aa23.71■■□□□ 1.39
SRSF1-208ENST00000584773 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
SRSF1-208ENST00000584773 SETDB2Q96T68 719 aa23.7■■□□□ 1.38
SRSF1-208ENST00000584773 HLFQ16534 295 aa23.69■■□□□ 1.38
SRSF1-208ENST00000584773 TRIM35Q9UPQ4 493 aa23.69■■□□□ 1.38
SRSF1-208ENST00000584773 MYL6BP14649 208 aa23.68■■□□□ 1.38
SRSF1-208ENST00000584773 LMOD3Q0VAK6 560 aa23.67■■□□□ 1.38
SRSF1-208ENST00000584773 CCDC184Q52MB2 194 aa23.67■■□□□ 1.38
SRSF1-208ENST00000584773 CNBD1Q8NA66 436 aa23.67■■□□□ 1.38
SRSF1-208ENST00000584773 TTLL7Q6ZT98 887 aa23.66■■□□□ 1.38
SRSF1-208ENST00000584773 FAM177BA6PVY3 158 aa23.65■■□□□ 1.38
SRSF1-208ENST00000584773 H0YIN7 160 aa23.65■■□□□ 1.38
SRSF1-208ENST00000584773 NPHP1O15259 732 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms