RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 SBF1O95248 1867 aa18.32■□□□□ 0.52
CCDC57-218ENST00000583593 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
CCDC57-218ENST00000583593 UBR2Q8IWV8 1755 aa18.31■□□□□ 0.52
CCDC57-218ENST00000583593 ZPR1O75312 459 aa18.3■□□□□ 0.52
CCDC57-218ENST00000583593 APLP1P51693 650 aa18.3■□□□□ 0.52
CCDC57-218ENST00000583593 DNAJC5GQ8N7S2 189 aa18.3■□□□□ 0.52
CCDC57-218ENST00000583593 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
CCDC57-218ENST00000583593 NARFQ9UHQ1 456 aa18.3■□□□□ 0.52
CCDC57-218ENST00000583593 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
CCDC57-218ENST00000583593 NFIXQ14938 502 aa18.29■□□□□ 0.52
CCDC57-218ENST00000583593 COL15A1P39059 1388 aa18.29■□□□□ 0.52
CCDC57-218ENST00000583593 DIAPH1O60610 1272 aaKnown RBP18.28■□□□□ 0.52
CCDC57-218ENST00000583593 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
CCDC57-218ENST00000583593 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.52
CCDC57-218ENST00000583593 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
CCDC57-218ENST00000583593 DLEC1Q9Y238 1755 aa18.27■□□□□ 0.51
CCDC57-218ENST00000583593 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
CCDC57-218ENST00000583593 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
CCDC57-218ENST00000583593 WDR90Q96KV7 1748 aa18.26■□□□□ 0.51
CCDC57-218ENST00000583593 PRELPP51888 382 aa18.25■□□□□ 0.51
CCDC57-218ENST00000583593 SERPINB2P05120 415 aa18.24■□□□□ 0.51
CCDC57-218ENST00000583593 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
CCDC57-218ENST00000583593 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
CCDC57-218ENST00000583593 CARMIL3Q8ND23 1372 aa18.23■□□□□ 0.51
CCDC57-218ENST00000583593 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
CCDC57-218ENST00000583593 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
CCDC57-218ENST00000583593 RASSF7Q02833 373 aa18.23■□□□□ 0.51
CCDC57-218ENST00000583593 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
CCDC57-218ENST00000583593 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
CCDC57-218ENST00000583593 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
CCDC57-218ENST00000583593 HTRA3P83110 453 aa18.22■□□□□ 0.51
CCDC57-218ENST00000583593 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
CCDC57-218ENST00000583593 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
CCDC57-218ENST00000583593 ANKRD31Q8N7Z5 1873 aa18.2■□□□□ 0.5
CCDC57-218ENST00000583593 NPC1L1Q9UHC9 1359 aa18.2■□□□□ 0.5
CCDC57-218ENST00000583593 FSTL1Q12841 308 aa18.2■□□□□ 0.5
CCDC57-218ENST00000583593 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
CCDC57-218ENST00000583593 PCNTO95613 3336 aa18.2■□□□□ 0.5
CCDC57-218ENST00000583593 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
CCDC57-218ENST00000583593 STARD3NLO95772 234 aa18.19■□□□□ 0.5
CCDC57-218ENST00000583593 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
CCDC57-218ENST00000583593 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
CCDC57-218ENST00000583593 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
CCDC57-218ENST00000583593 TTLL6Q8N841 843 aa18.19■□□□□ 0.5
CCDC57-218ENST00000583593 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
CCDC57-218ENST00000583593 GNAT3A8MTJ3 354 aa18.18■□□□□ 0.5
CCDC57-218ENST00000583593 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
CCDC57-218ENST00000583593 LMNB1P20700 586 aa18.18■□□□□ 0.5
CCDC57-218ENST00000583593 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
CCDC57-218ENST00000583593 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
CCDC57-218ENST00000583593 ZC3H4Q9UPT8 1303 aaKnown RBP18.18■□□□□ 0.5
CCDC57-218ENST00000583593 NFKBIEO00221 500 aa18.17■□□□□ 0.5
CCDC57-218ENST00000583593 CNGB1Q14028 1251 aaPredicted RBP18.17■□□□□ 0.5
CCDC57-218ENST00000583593 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
CCDC57-218ENST00000583593 TIAM2Q8IVF5 1701 aa18.17■□□□□ 0.5
CCDC57-218ENST00000583593 COL11A2P13942 1736 aaPredicted RBP18.16■□□□□ 0.5
CCDC57-218ENST00000583593 A0A087WZG4 1122 aa18.16■□□□□ 0.5
CCDC57-218ENST00000583593 H0YIN7 160 aa18.16■□□□□ 0.5
CCDC57-218ENST00000583593 TEFQ10587 303 aa18.16■□□□□ 0.5
CCDC57-218ENST00000583593 KLRG1Q96E93 195 aa18.16■□□□□ 0.5
CCDC57-218ENST00000583593 TBC1D2BQ9UPU7 963 aa18.16■□□□□ 0.5
CCDC57-218ENST00000583593 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
CCDC57-218ENST00000583593 GLTPD2A6NH11 291 aa18.15■□□□□ 0.5
CCDC57-218ENST00000583593 KCNQ3O43525 872 aa18.15■□□□□ 0.5
CCDC57-218ENST00000583593 A1BGP04217 495 aa18.15■□□□□ 0.5
CCDC57-218ENST00000583593 CCDC24Q8N4L8 307 aa18.15■□□□□ 0.5
CCDC57-218ENST00000583593 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
CCDC57-218ENST00000583593 TEX13AQ9BXU3 409 aaPredicted RBP18.15■□□□□ 0.5
CCDC57-218ENST00000583593 IL6STP40189 918 aaPredicted RBP18.14■□□□□ 0.49
CCDC57-218ENST00000583593 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
CCDC57-218ENST00000583593 FER1L6Q2WGJ9 1857 aa18.14■□□□□ 0.49
CCDC57-218ENST00000583593 JMYQ8N9B5 988 aa18.13■□□□□ 0.49
CCDC57-218ENST00000583593 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
CCDC57-218ENST00000583593 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
CCDC57-218ENST00000583593 DICER1Q9UPY3 1922 aaKnown RBP18.12■□□□□ 0.49
CCDC57-218ENST00000583593 POTECB2RU33 542 aa18.12■□□□□ 0.49
CCDC57-218ENST00000583593 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
CCDC57-218ENST00000583593 SMC1BQ8NDV3 1235 aa18.12■□□□□ 0.49
CCDC57-218ENST00000583593 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
CCDC57-218ENST00000583593 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
CCDC57-218ENST00000583593 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
CCDC57-218ENST00000583593 VEGFAP15692 232 aaPredicted RBP18.11■□□□□ 0.49
CCDC57-218ENST00000583593 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
CCDC57-218ENST00000583593 ZNF622Q969S3 477 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCDC57-218ENST00000583593 C21orf2O43822 256 aa18.1■□□□□ 0.49
CCDC57-218ENST00000583593 PDE6BP35913 854 aa18.1■□□□□ 0.49
CCDC57-218ENST00000583593 PDZRN3Q9UPQ7 1066 aa18.1■□□□□ 0.49
CCDC57-218ENST00000583593 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
CCDC57-218ENST00000583593 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
CCDC57-218ENST00000583593 SLX4Q8IY92 1834 aa18.09■□□□□ 0.49
CCDC57-218ENST00000583593 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
CCDC57-218ENST00000583593 BTBD11A6QL63 1104 aa18.09■□□□□ 0.49
CCDC57-218ENST00000583593 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
CCDC57-218ENST00000583593 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
CCDC57-218ENST00000583593 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
CCDC57-218ENST00000583593 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
CCDC57-218ENST00000583593 DZIP3Q86Y13 1208 aaKnown RBP18.07■□□□□ 0.48
CCDC57-218ENST00000583593 SRGNP10124 158 aa18.06■□□□□ 0.48
CCDC57-218ENST00000583593 CNBD1Q8NA66 436 aa18.06■□□□□ 0.48
CCDC57-218ENST00000583593 LTBP3Q9NS15 1303 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms