RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PANK3Q9H999 370 aa13.12□□□□□ -0.31
MKS1-212ENST00000583577 COG3Q96JB2 828 aa13.11□□□□□ -0.31
MKS1-212ENST00000583577 CARD14Q9BXL6 1004 aa13.11□□□□□ -0.31
MKS1-212ENST00000583577 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
MKS1-212ENST00000583577 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
MKS1-212ENST00000583577 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
MKS1-212ENST00000583577 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
MKS1-212ENST00000583577 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
MKS1-212ENST00000583577 FYB1O15117 783 aa13.09□□□□□ -0.31
MKS1-212ENST00000583577 ADRA2BP18089 450 aa13.09□□□□□ -0.31
MKS1-212ENST00000583577 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
MKS1-212ENST00000583577 DDR1Q08345 913 aa13.09□□□□□ -0.31
MKS1-212ENST00000583577 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
MKS1-212ENST00000583577 GGNBP2Q9H3C7 697 aa13.09□□□□□ -0.31
MKS1-212ENST00000583577 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
MKS1-212ENST00000583577 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
MKS1-212ENST00000583577 DLEC1Q9Y238 1755 aa13.08□□□□□ -0.32
MKS1-212ENST00000583577 RRS1Q15050 365 aaKnown RBP13.08□□□□□ -0.32
MKS1-212ENST00000583577 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
MKS1-212ENST00000583577 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
MKS1-212ENST00000583577 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
MKS1-212ENST00000583577 DEFB115Q30KQ5 88 aa13.07□□□□□ -0.32
MKS1-212ENST00000583577 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
MKS1-212ENST00000583577 ATG3Q9NT62 314 aa13.07□□□□□ -0.32
MKS1-212ENST00000583577 NFKBIEO00221 500 aa13.06□□□□□ -0.32
MKS1-212ENST00000583577 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
MKS1-212ENST00000583577 SCN4AP35499 1836 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
MKS1-212ENST00000583577 ERFEQ4G0M1 354 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
MKS1-212ENST00000583577 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
MKS1-212ENST00000583577 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 INSRP06213 1382 aa13.05□□□□□ -0.32
MKS1-212ENST00000583577 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
MKS1-212ENST00000583577 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
MKS1-212ENST00000583577 TTLL6Q8N841 843 aa13.04□□□□□ -0.32
MKS1-212ENST00000583577 MCOLN1Q9GZU1 580 aa13.04□□□□□ -0.32
MKS1-212ENST00000583577 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
MKS1-212ENST00000583577 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
MKS1-212ENST00000583577 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
MKS1-212ENST00000583577 MRS2Q9HD23 443 aa13.03□□□□□ -0.32
MKS1-212ENST00000583577 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
MKS1-212ENST00000583577 ABT1Q9ULW3 272 aaKnown RBP13.03□□□□□ -0.32
MKS1-212ENST00000583577 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
MKS1-212ENST00000583577 KDRP35968 1356 aa13.03□□□□□ -0.32
MKS1-212ENST00000583577 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.32
MKS1-212ENST00000583577 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
MKS1-212ENST00000583577 GRM1Q13255 1194 aa13.02□□□□□ -0.33
MKS1-212ENST00000583577 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
MKS1-212ENST00000583577 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
MKS1-212ENST00000583577 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
MKS1-212ENST00000583577 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
MKS1-212ENST00000583577 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
MKS1-212ENST00000583577 PER1O15534 1290 aaPredicted RBP13.01□□□□□ -0.33
MKS1-212ENST00000583577 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
MKS1-212ENST00000583577 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
MKS1-212ENST00000583577 IQCA1LA6NCM1 817 aa13□□□□□ -0.33
MKS1-212ENST00000583577 TM4SF1P30408 202 aa13□□□□□ -0.33
MKS1-212ENST00000583577 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
MKS1-212ENST00000583577 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
MKS1-212ENST00000583577 DGKZQ13574 1117 aa12.99□□□□□ -0.33
MKS1-212ENST00000583577 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
MKS1-212ENST00000583577 PRPF38BQ5VTL8 546 aaKnown RBP12.99□□□□□ -0.33
MKS1-212ENST00000583577 TRPM7Q96QT4 1865 aa12.98□□□□□ -0.33
MKS1-212ENST00000583577 RNF123Q5XPI4 1314 aa12.98□□□□□ -0.33
MKS1-212ENST00000583577 C21orf2O43822 256 aa12.98□□□□□ -0.33
MKS1-212ENST00000583577 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
MKS1-212ENST00000583577 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
MKS1-212ENST00000583577 RALBP1Q15311 655 aa12.98□□□□□ -0.33
MKS1-212ENST00000583577 CAPNS2Q96L46 248 aa12.98□□□□□ -0.33
MKS1-212ENST00000583577 THSD7BQ9C0I4 1608 aa12.98□□□□□ -0.33
MKS1-212ENST00000583577 KIF24Q5T7B8 1368 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 H0YIN7 160 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 ZPR1O75312 459 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 PHKG2P15735 406 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 SOX10P56693 466 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 CC2D1BQ5T0F9 858 aaKnown RBP12.97□□□□□ -0.33
MKS1-212ENST00000583577 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
MKS1-212ENST00000583577 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
MKS1-212ENST00000583577 LTBP1Q14766 1721 aa12.96□□□□□ -0.33
MKS1-212ENST00000583577 FLT4P35916 1363 aa12.96□□□□□ -0.33
MKS1-212ENST00000583577 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
MKS1-212ENST00000583577 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
MKS1-212ENST00000583577 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
MKS1-212ENST00000583577 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.33
MKS1-212ENST00000583577 CNTROBQ8N137 903 aa12.96□□□□□ -0.33
MKS1-212ENST00000583577 ZNF622Q969S3 477 aaKnown RBP eCLIP12.96□□□□□ -0.33
MKS1-212ENST00000583577 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
MKS1-212ENST00000583577 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
MKS1-212ENST00000583577 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
MKS1-212ENST00000583577 PTCD1O75127 700 aaKnown RBP12.95□□□□□ -0.34
MKS1-212ENST00000583577 ECE1P42892 770 aa12.95□□□□□ -0.34
MKS1-212ENST00000583577 NUDCQ9Y266 331 aa12.95□□□□□ -0.34
MKS1-212ENST00000583577 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms