RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SNRPA1P09661 255 aaKnown RBP21.05■□□□□ 0.96
CDK5RAP3-228ENST00000583363 RARSP54136 660 aaKnown RBP21.05■□□□□ 0.96
CDK5RAP3-228ENST00000583363 VSIG10Q8N0Z9 540 aa21.04■□□□□ 0.96
CDK5RAP3-228ENST00000583363 PRAMEF22A3QJZ6 481 aa21.03■□□□□ 0.96
CDK5RAP3-228ENST00000583363 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
CDK5RAP3-228ENST00000583363 ALDH1L2Q3SY69 923 aa21.03■□□□□ 0.96
CDK5RAP3-228ENST00000583363 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-228ENST00000583363 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
CDK5RAP3-228ENST00000583363 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
CDK5RAP3-228ENST00000583363 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
CDK5RAP3-228ENST00000583363 SSH1Q8WYL5 1049 aa21.02■□□□□ 0.96
CDK5RAP3-228ENST00000583363 SLC4A9Q96Q91 983 aa21.02■□□□□ 0.96
CDK5RAP3-228ENST00000583363 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.96
CDK5RAP3-228ENST00000583363 CHD4Q14839 1912 aa21.02■□□□□ 0.95
CDK5RAP3-228ENST00000583363 ARXQ96QS3 562 aa21.01■□□□□ 0.95
CDK5RAP3-228ENST00000583363 USP16Q9Y5T5 823 aa21.01■□□□□ 0.95
CDK5RAP3-228ENST00000583363 UBR2Q8IWV8 1755 aa21■□□□□ 0.95
CDK5RAP3-228ENST00000583363 BCAR3O75815 825 aa21■□□□□ 0.95
CDK5RAP3-228ENST00000583363 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
CDK5RAP3-228ENST00000583363 CCDC30Q5VVM6 783 aa21■□□□□ 0.95
CDK5RAP3-228ENST00000583363 TEX13AQ9BXU3 409 aaPredicted RBP21■□□□□ 0.95
CDK5RAP3-228ENST00000583363 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
CDK5RAP3-228ENST00000583363 LOC102724428A0A0B4J2F2 783 aa20.99■□□□□ 0.95
CDK5RAP3-228ENST00000583363 SIK1P57059 783 aa20.99■□□□□ 0.95
CDK5RAP3-228ENST00000583363 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
CDK5RAP3-228ENST00000583363 MRPL50Q8N5N7 158 aaKnown RBP20.99■□□□□ 0.95
CDK5RAP3-228ENST00000583363 SUPT16HQ9Y5B9 1047 aaKnown RBP20.99■□□□□ 0.95
CDK5RAP3-228ENST00000583363 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
CDK5RAP3-228ENST00000583363 BRPF1P55201 1214 aaPredicted RBP20.98■□□□□ 0.95
CDK5RAP3-228ENST00000583363 QSER1Q2KHR3 1735 aa20.98■□□□□ 0.95
CDK5RAP3-228ENST00000583363 DNAJC10Q8IXB1 793 aa20.97■□□□□ 0.95
CDK5RAP3-228ENST00000583363 NECTIN2Q92692 538 aa20.97■□□□□ 0.95
CDK5RAP3-228ENST00000583363 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
CDK5RAP3-228ENST00000583363 ATP6V1AP38606 617 aa20.96■□□□□ 0.95
CDK5RAP3-228ENST00000583363 BCL2L13Q9BXK5 485 aa20.96■□□□□ 0.95
CDK5RAP3-228ENST00000583363 SMC4Q9NTJ3 1288 aa20.96■□□□□ 0.95
CDK5RAP3-228ENST00000583363 TUBGCP6Q96RT7 1819 aa20.95■□□□□ 0.94
CDK5RAP3-228ENST00000583363 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
CDK5RAP3-228ENST00000583363 STK31Q9BXU1 1019 aa20.95■□□□□ 0.94
CDK5RAP3-228ENST00000583363 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.94
CDK5RAP3-228ENST00000583363 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
CDK5RAP3-228ENST00000583363 STARD3NLO95772 234 aa20.94■□□□□ 0.94
CDK5RAP3-228ENST00000583363 CYP19A1P11511 503 aaPredicted RBP20.93■□□□□ 0.94
CDK5RAP3-228ENST00000583363 ITPK1Q13572 414 aa20.93■□□□□ 0.94
CDK5RAP3-228ENST00000583363 PDIA6Q15084 440 aa20.93■□□□□ 0.94
CDK5RAP3-228ENST00000583363 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
CDK5RAP3-228ENST00000583363 CHPF2Q9P2E5 772 aa20.93■□□□□ 0.94
CDK5RAP3-228ENST00000583363 DBF4Q9UBU7 674 aaPredicted RBP20.93■□□□□ 0.94
CDK5RAP3-228ENST00000583363 LY75O60449 1722 aa20.92■□□□□ 0.94
CDK5RAP3-228ENST00000583363 KCNQ4P56696 695 aa20.92■□□□□ 0.94
CDK5RAP3-228ENST00000583363 DDX21Q9NR30 783 aaKnown RBP eCLIP20.92■□□□□ 0.94
CDK5RAP3-228ENST00000583363 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
CDK5RAP3-228ENST00000583363 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
CDK5RAP3-228ENST00000583363 C5P01031 1676 aa20.91■□□□□ 0.94
CDK5RAP3-228ENST00000583363 A1BGP04217 495 aa20.91■□□□□ 0.94
CDK5RAP3-228ENST00000583363 ERBB4Q15303 1308 aa20.91■□□□□ 0.94
CDK5RAP3-228ENST00000583363 SLC16A10Q8TF71 515 aa20.91■□□□□ 0.94
CDK5RAP3-228ENST00000583363 RRP1P56182 461 aaKnown RBP20.9■□□□□ 0.94
CDK5RAP3-228ENST00000583363 PROSER3Q2NL68 480 aa20.9■□□□□ 0.94
CDK5RAP3-228ENST00000583363 G2E3Q7L622 706 aa20.9■□□□□ 0.94
CDK5RAP3-228ENST00000583363 CCNL1Q9UK58 526 aaPredicted RBP20.9■□□□□ 0.94
CDK5RAP3-228ENST00000583363 NBPF26B4DH59 902 aa20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 PLIN1O60240 522 aa20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 ANXA1P04083 346 aa20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 NBPF10Q6P3W6 841 aaKnown RBP20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 NBPF15Q8N660 670 aa20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 HYPKQ9NX55 129 aa20.89■□□□□ 0.93
CDK5RAP3-228ENST00000583363 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 LRP10Q7Z4F1 713 aa20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 KLHL34Q8N239 644 aa20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 LINC00116Q8NCU8 138 aa20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 ARHGAP45Q92619 1136 aa20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 FRAT1Q92837 279 aaPredicted RBP20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 ZNF831Q5JPB2 1677 aa20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 CACNA1FO60840 1977 aa20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
CDK5RAP3-228ENST00000583363 KIF16BQ96L93 1317 aa20.87■□□□□ 0.93
CDK5RAP3-228ENST00000583363 GPR162Q16538 588 aa20.87■□□□□ 0.93
CDK5RAP3-228ENST00000583363 ZKSCAN2Q63HK3 967 aa20.87■□□□□ 0.93
CDK5RAP3-228ENST00000583363 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
CDK5RAP3-228ENST00000583363 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
CDK5RAP3-228ENST00000583363 TFCP2L1Q9NZI6 479 aa20.87■□□□□ 0.93
CDK5RAP3-228ENST00000583363 MYL6BP14649 208 aa20.86■□□□□ 0.93
CDK5RAP3-228ENST00000583363 POLD1P28340 1107 aa20.86■□□□□ 0.93
CDK5RAP3-228ENST00000583363 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
CDK5RAP3-228ENST00000583363 FLIIQ13045 1269 aa20.86■□□□□ 0.93
CDK5RAP3-228ENST00000583363 TJP1Q07157 1748 aa20.86■□□□□ 0.93
CDK5RAP3-228ENST00000583363 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
CDK5RAP3-228ENST00000583363 PTPRCP08575 1304 aa20.85■□□□□ 0.93
CDK5RAP3-228ENST00000583363 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
CDK5RAP3-228ENST00000583363 RC3H1Q5TC82 1133 aaKnown RBP20.85■□□□□ 0.93
CDK5RAP3-228ENST00000583363 CCDC87Q9NVE4 849 aa20.85■□□□□ 0.93
CDK5RAP3-228ENST00000583363 HMGB2P26583 209 aaKnown RBP20.84■□□□□ 0.93
CDK5RAP3-228ENST00000583363 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
CDK5RAP3-228ENST00000583363 ATF7IPQ6VMQ6 1270 aa20.84■□□□□ 0.93
CDK5RAP3-228ENST00000583363 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
CDK5RAP3-228ENST00000583363 CICQ96RK0 1608 aaPredicted RBP20.84■□□□□ 0.93
CDK5RAP3-228ENST00000583363 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
CDK5RAP3-228ENST00000583363 IL6STP40189 918 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms