RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF358Q9NW07 568 aa9.29□□□□□ -0.92
SMCHD1-208ENST00000583344 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 NBPF1Q3BBV0 1214 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 ARSJQ5FYB0 599 aaPredicted RBP9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 GPAT2Q6NUI2 795 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 PODNQ7Z5L7 613 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 UCN2Q96RP3 112 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 HCN2Q9UL51 889 aa9.28□□□□□ -0.92
SMCHD1-208ENST00000583344 DCDC2BA2VCK2 349 aa9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 PHF20L1A8MW92 1017 aa9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 LZTS3O60299 673 aaPredicted RBP9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 SNRPNP63162 240 aaKnown RBP9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 FIGNL1Q6PIW4 674 aa9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 BEND7Q8N7W2 519 aaPredicted RBP9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 PCDHGC4Q9Y5F7 938 aa9.27□□□□□ -0.93
SMCHD1-208ENST00000583344 BACH1O14867 736 aa9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 TATP17735 454 aaPredicted RBP9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 TBCELQ5QJ74 424 aa9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 NLRP8Q86W28 1048 aa9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 ZDHHC1Q8WTX9 485 aa9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 SCHIP1Q9P0W5 487 aaPredicted RBP9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 GDF2Q9UK05 429 aaPredicted RBP9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 KIAA1024Q9UPX6 916 aa9.26□□□□□ -0.93
SMCHD1-208ENST00000583344 USP17L3A6NCW0 530 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 USP17L4A6NCW7 530 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 TXLNAP40222 546 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 USP17L2Q6R6M4 530 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 USP17L1Q7RTZ2 530 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 GOLGA6L1Q8N7Z2 621 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 EDARADDQ8WWZ3 215 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 ZIC5Q96T25 663 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 ZDHHC3Q9NYG2 299 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 GGA1Q9UJY5 639 aa9.25□□□□□ -0.93
SMCHD1-208ENST00000583344 CD33P20138 364 aa9.24□□□□□ -0.93
SMCHD1-208ENST00000583344 EPHA4P54764 986 aa9.24□□□□□ -0.93
SMCHD1-208ENST00000583344 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
SMCHD1-208ENST00000583344 TPCN2Q8NHX9 752 aa9.24□□□□□ -0.93
SMCHD1-208ENST00000583344 CLUAP1Q96AJ1 413 aa9.24□□□□□ -0.93
SMCHD1-208ENST00000583344 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
SMCHD1-208ENST00000583344 KHNYNO15037 678 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 CLDN10P78369 228 aa9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 FOXK2Q01167 660 aa9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 SLCO4C1Q6ZQN7 724 aa9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 RRAGCQ9HB90 399 aa9.23□□□□□ -0.93
SMCHD1-208ENST00000583344 TNP2Q05952 138 aa9.22□□□□□ -0.93
SMCHD1-208ENST00000583344 BICDL1Q6ZP65 573 aa9.22□□□□□ -0.93
SMCHD1-208ENST00000583344 TRIM50Q86XT4 487 aa9.22□□□□□ -0.93
SMCHD1-208ENST00000583344 PLEKHM2Q8IWE5 1019 aa9.22□□□□□ -0.93
SMCHD1-208ENST00000583344 L3MBTL2Q969R5 705 aa9.22□□□□□ -0.93
SMCHD1-208ENST00000583344 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
SMCHD1-208ENST00000583344 NEURL1BA8MQ27 555 aa9.21□□□□□ -0.94
SMCHD1-208ENST00000583344 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
SMCHD1-208ENST00000583344 ATP9BO43861 1147 aa9.21□□□□□ -0.94
SMCHD1-208ENST00000583344 SH3PXD2AQ5TCZ1 1133 aa9.21□□□□□ -0.94
SMCHD1-208ENST00000583344 ITGB2P05107 769 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 ARAFP10398 606 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 AMPD1P23109 780 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 SUZ12Q15022 739 aaKnown RBP9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 TEAD4Q15561 434 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 CCDC102BQ68D86 513 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 ZNF232Q9UNY5 417 aa9.2□□□□□ -0.94
SMCHD1-208ENST00000583344 FAM157BP0CG42 384 aa9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 NOS2P35228 1153 aa9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 ATP1A2P50993 1020 aa9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 STRN4Q9NRL3 753 aa9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 MKL2Q9ULH7 1088 aa9.19□□□□□ -0.94
SMCHD1-208ENST00000583344 EPXP11678 715 aa9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 LRRC69Q6ZNQ3 347 aa9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 PROSER2Q86WR7 435 aaPredicted RBP9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 GLMNQ92990 594 aa9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
SMCHD1-208ENST00000583344 IGHA1P01876 353 aa9.17□□□□□ -0.94
SMCHD1-208ENST00000583344 FAM182BQ5T319 152 aa9.17□□□□□ -0.94
SMCHD1-208ENST00000583344 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
SMCHD1-208ENST00000583344 FNBP4Q8N3X1 1017 aaPredicted RBP9.17□□□□□ -0.94
SMCHD1-208ENST00000583344 SERTM1A2A2V5 107 aa9.16□□□□□ -0.94
SMCHD1-208ENST00000583344 EML1O00423 815 aa9.16□□□□□ -0.94
SMCHD1-208ENST00000583344 COL8A1P27658 744 aa9.16□□□□□ -0.94
SMCHD1-208ENST00000583344 FCHSD1Q86WN1 690 aa9.16□□□□□ -0.94
SMCHD1-208ENST00000583344 BTBD6Q96KE9 485 aa9.16□□□□□ -0.94
SMCHD1-208ENST00000583344 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
SMCHD1-208ENST00000583344 SFI1A8K8P3 1242 aa9.15□□□□□ -0.94
SMCHD1-208ENST00000583344 EFSO43281 561 aa9.15□□□□□ -0.94
SMCHD1-208ENST00000583344 ADH6P28332 368 aa9.15□□□□□ -0.94
SMCHD1-208ENST00000583344 PCBP4P57723 403 aaKnown RBP9.15□□□□□ -0.94
SMCHD1-208ENST00000583344 GRIN2CQ14957 1233 aa9.15□□□□□ -0.94
SMCHD1-208ENST00000583344 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
SMCHD1-208ENST00000583344 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms