RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 FCHSD2O94868 740 aa21.7■■□□□ 1.06
TNFAIP1-206ENST00000583213 USPL1Q5W0Q7 1092 aa21.7■■□□□ 1.06
TNFAIP1-206ENST00000583213 GAS2L2Q8NHY3 880 aa21.7■■□□□ 1.06
TNFAIP1-206ENST00000583213 PIM2Q9P1W9 311 aa21.7■■□□□ 1.06
TNFAIP1-206ENST00000583213 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
TNFAIP1-206ENST00000583213 DLEC1Q9Y238 1755 aa21.69■■□□□ 1.06
TNFAIP1-206ENST00000583213 IL17REQ8NFR9 667 aa21.69■■□□□ 1.06
TNFAIP1-206ENST00000583213 ZNF526Q8TF50 670 aaPredicted RBP21.69■■□□□ 1.06
TNFAIP1-206ENST00000583213 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
TNFAIP1-206ENST00000583213 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
TNFAIP1-206ENST00000583213 NFIXQ14938 502 aa21.67■■□□□ 1.06
TNFAIP1-206ENST00000583213 ARHGAP27Q6ZUM4 889 aa21.67■■□□□ 1.06
TNFAIP1-206ENST00000583213 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
TNFAIP1-206ENST00000583213 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
TNFAIP1-206ENST00000583213 HSPA6P17066 643 aa21.66■■□□□ 1.06
TNFAIP1-206ENST00000583213 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
TNFAIP1-206ENST00000583213 DALRD3Q5D0E6 543 aaKnown RBP21.66■■□□□ 1.06
TNFAIP1-206ENST00000583213 ZNF790Q6PG37 636 aa21.66■■□□□ 1.06
TNFAIP1-206ENST00000583213 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
TNFAIP1-206ENST00000583213 ZNF496Q96IT1 587 aaPredicted RBP21.65■■□□□ 1.06
TNFAIP1-206ENST00000583213 STARD3NLO95772 234 aa21.64■■□□□ 1.05
TNFAIP1-206ENST00000583213 CHRNA5P30532 468 aa21.64■■□□□ 1.05
TNFAIP1-206ENST00000583213 TTC5Q8N0Z6 440 aa21.64■■□□□ 1.05
TNFAIP1-206ENST00000583213 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.05
TNFAIP1-206ENST00000583213 SBF1O95248 1867 aa21.64■■□□□ 1.05
TNFAIP1-206ENST00000583213 TEFQ10587 303 aa21.63■■□□□ 1.05
TNFAIP1-206ENST00000583213 TEX13AQ9BXU3 409 aaPredicted RBP21.63■■□□□ 1.05
TNFAIP1-206ENST00000583213 PHACTR3Q96KR7 559 aa21.62■■□□□ 1.05
TNFAIP1-206ENST00000583213 C9orf131Q5VYM1 1079 aa21.61■■□□□ 1.05
TNFAIP1-206ENST00000583213 CFAP53Q96M91 514 aa21.61■■□□□ 1.05
TNFAIP1-206ENST00000583213 A0A087WZG4 1122 aa21.6■■□□□ 1.05
TNFAIP1-206ENST00000583213 SERPINB2P05120 415 aa21.6■■□□□ 1.05
TNFAIP1-206ENST00000583213 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
TNFAIP1-206ENST00000583213 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
TNFAIP1-206ENST00000583213 ANKRD31Q8N7Z5 1873 aa21.59■■□□□ 1.05
TNFAIP1-206ENST00000583213 CARMIL3Q8ND23 1372 aa21.59■■□□□ 1.05
TNFAIP1-206ENST00000583213 TOMM70O94826 608 aa21.58■■□□□ 1.05
TNFAIP1-206ENST00000583213 PPP2R1AP30153 589 aa21.58■■□□□ 1.05
TNFAIP1-206ENST00000583213 IL6STP40189 918 aaPredicted RBP21.58■■□□□ 1.05
TNFAIP1-206ENST00000583213 FMNL2Q96PY5 1086 aa21.58■■□□□ 1.05
TNFAIP1-206ENST00000583213 BCORQ6W2J9 1755 aa21.58■■□□□ 1.04
TNFAIP1-206ENST00000583213 NMRK2Q9NPI5 230 aa21.57■■□□□ 1.04
TNFAIP1-206ENST00000583213 ZC3H4Q9UPT8 1303 aaKnown RBP21.56■■□□□ 1.04
TNFAIP1-206ENST00000583213 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
TNFAIP1-206ENST00000583213 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
TNFAIP1-206ENST00000583213 TNRC6CQ9HCJ0 1690 aaKnown RBP21.56■■□□□ 1.04
TNFAIP1-206ENST00000583213 TBC1D9BQ66K14 1250 aa21.54■■□□□ 1.04
TNFAIP1-206ENST00000583213 RNF181Q9P0P0 153 aa21.54■■□□□ 1.04
TNFAIP1-206ENST00000583213 COL11A2P13942 1736 aaPredicted RBP21.54■■□□□ 1.04
TNFAIP1-206ENST00000583213 BTBD11A6QL63 1104 aa21.53■■□□□ 1.04
TNFAIP1-206ENST00000583213 KCNQ3O43525 872 aa21.53■■□□□ 1.04
TNFAIP1-206ENST00000583213 TTLL6Q8N841 843 aa21.53■■□□□ 1.04
TNFAIP1-206ENST00000583213 RBM46Q8TBY0 533 aaKnown RBP21.53■■□□□ 1.04
TNFAIP1-206ENST00000583213 PDZRN3Q9UPQ7 1066 aa21.53■■□□□ 1.04
TNFAIP1-206ENST00000583213 HTATSF1O43719 755 aaKnown RBP21.52■■□□□ 1.04
TNFAIP1-206ENST00000583213 CAMTA2O94983 1202 aa21.52■■□□□ 1.04
TNFAIP1-206ENST00000583213 A1BGP04217 495 aa21.52■■□□□ 1.04
TNFAIP1-206ENST00000583213 BRIP1Q9BX63 1249 aa21.52■■□□□ 1.04
TNFAIP1-206ENST00000583213 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.03
TNFAIP1-206ENST00000583213 U2AF1L5P0DN76 240 aaPredicted RBP21.51■■□□□ 1.03
TNFAIP1-206ENST00000583213 APLP1P51693 650 aa21.51■■□□□ 1.03
TNFAIP1-206ENST00000583213 PRELPP51888 382 aa21.51■■□□□ 1.03
TNFAIP1-206ENST00000583213 U2AF1Q01081 240 aaKnown RBP eCLIP21.51■■□□□ 1.03
TNFAIP1-206ENST00000583213 C2CD5Q86YS7 1000 aa21.51■■□□□ 1.03
TNFAIP1-206ENST00000583213 TBC1D2BQ9UPU7 963 aa21.51■■□□□ 1.03
TNFAIP1-206ENST00000583213 H0YIN7 160 aa21.5■■□□□ 1.03
TNFAIP1-206ENST00000583213 PRR5LQ6MZQ0 368 aa21.5■■□□□ 1.03
TNFAIP1-206ENST00000583213 RGL2O15211 777 aa21.49■■□□□ 1.03
TNFAIP1-206ENST00000583213 LMNB1P20700 586 aa21.49■■□□□ 1.03
TNFAIP1-206ENST00000583213 BICDL1Q6ZP65 573 aa21.49■■□□□ 1.03
TNFAIP1-206ENST00000583213 TIAM2Q8IVF5 1701 aa21.49■■□□□ 1.03
TNFAIP1-206ENST00000583213 FER1L6Q2WGJ9 1857 aa21.48■■□□□ 1.03
TNFAIP1-206ENST00000583213 NFKBIEO00221 500 aa21.48■■□□□ 1.03
TNFAIP1-206ENST00000583213 RASSF7Q02833 373 aa21.48■■□□□ 1.03
TNFAIP1-206ENST00000583213 MCM10Q7L590 875 aa21.48■■□□□ 1.03
TNFAIP1-206ENST00000583213 USP16Q9Y5T5 823 aa21.48■■□□□ 1.03
TNFAIP1-206ENST00000583213 ARFGEF2Q9Y6D5 1785 aa21.48■■□□□ 1.03
TNFAIP1-206ENST00000583213 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
TNFAIP1-206ENST00000583213 PDE6BP35913 854 aa21.47■■□□□ 1.03
TNFAIP1-206ENST00000583213 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
TNFAIP1-206ENST00000583213 WDR90Q96KV7 1748 aa21.46■■□□□ 1.03
TNFAIP1-206ENST00000583213 LAMB4A4D0S4 1761 aa21.46■■□□□ 1.03
TNFAIP1-206ENST00000583213 CCDC88AQ3V6T2 1871 aa21.46■■□□□ 1.03
TNFAIP1-206ENST00000583213 FSTL1Q12841 308 aa21.46■■□□□ 1.03
TNFAIP1-206ENST00000583213 CLEC4GQ6UXB4 293 aa21.46■■□□□ 1.03
TNFAIP1-206ENST00000583213 DNAJC5GQ8N7S2 189 aa21.46■■□□□ 1.03
TNFAIP1-206ENST00000583213 DICER1Q9UPY3 1922 aaKnown RBP21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 PRAMEF22A3QJZ6 481 aa21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 SETDB2Q96T68 719 aa21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 ZNF330Q9Y3S2 320 aaPredicted RBP21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 KDM3BQ7LBC6 1761 aa21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
TNFAIP1-206ENST00000583213 CNBD1Q8NA66 436 aa21.44■■□□□ 1.02
TNFAIP1-206ENST00000583213 GLTPD2A6NH11 291 aa21.43■■□□□ 1.02
TNFAIP1-206ENST00000583213 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
TNFAIP1-206ENST00000583213 LTBP3Q9NS15 1303 aa21.43■■□□□ 1.02
TNFAIP1-206ENST00000583213 NBPF26B4DH59 902 aa21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
TNFAIP1-206ENST00000583213 NBPF10Q6P3W6 841 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms