RNA–Protein interactions for RNA: ENST00000582989.1

SPDYE4-203, Transcript of speedy/RINGO cell cycle regulator family member E4, humanhuman

TSL 1 (best)

Gene SPDYE4, Length 928 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4-203ENST00000582989 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
SPDYE4-203ENST00000582989 STARD3NLO95772 234 aa20.31■□□□□ 0.84
SPDYE4-203ENST00000582989 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
SPDYE4-203ENST00000582989 TGFB2P61812 414 aa20.31■□□□□ 0.84
SPDYE4-203ENST00000582989 MCM10Q7L590 875 aa20.31■□□□□ 0.84
SPDYE4-203ENST00000582989 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
SPDYE4-203ENST00000582989 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
SPDYE4-203ENST00000582989 BTBD11A6QL63 1104 aa20.3■□□□□ 0.84
SPDYE4-203ENST00000582989 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
SPDYE4-203ENST00000582989 NARFQ9UHQ1 456 aa20.3■□□□□ 0.84
SPDYE4-203ENST00000582989 KCNQ3O43525 872 aa20.29■□□□□ 0.84
SPDYE4-203ENST00000582989 C1QTNF8P60827 252 aa20.29■□□□□ 0.84
SPDYE4-203ENST00000582989 POLRMTO00411 1230 aaKnown RBP20.28■□□□□ 0.84
SPDYE4-203ENST00000582989 DPEP1P16444 411 aa20.28■□□□□ 0.84
SPDYE4-203ENST00000582989 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
SPDYE4-203ENST00000582989 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
SPDYE4-203ENST00000582989 TM4SF1P30408 202 aa20.27■□□□□ 0.84
SPDYE4-203ENST00000582989 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
SPDYE4-203ENST00000582989 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
SPDYE4-203ENST00000582989 NEFMP07197 916 aa20.26■□□□□ 0.83
SPDYE4-203ENST00000582989 EIF5P55010 431 aaKnown RBP20.26■□□□□ 0.83
SPDYE4-203ENST00000582989 BCL2L12Q9HB09 334 aa20.26■□□□□ 0.83
SPDYE4-203ENST00000582989 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
SPDYE4-203ENST00000582989 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
SPDYE4-203ENST00000582989 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
SPDYE4-203ENST00000582989 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
SPDYE4-203ENST00000582989 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
SPDYE4-203ENST00000582989 NFIXQ14938 502 aa20.25■□□□□ 0.83
SPDYE4-203ENST00000582989 ATP10DQ9P241 1426 aa20.25■□□□□ 0.83
SPDYE4-203ENST00000582989 AFDNP55196 1824 aaKnown RBP20.25■□□□□ 0.83
SPDYE4-203ENST00000582989 A0A087WZG4 1122 aa20.24■□□□□ 0.83
SPDYE4-203ENST00000582989 RALBP1Q15311 655 aa20.24■□□□□ 0.83
SPDYE4-203ENST00000582989 ADCY9O60503 1353 aa20.23■□□□□ 0.83
SPDYE4-203ENST00000582989 NRXN2Q9P2S2 1712 aa20.23■□□□□ 0.83
SPDYE4-203ENST00000582989 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
SPDYE4-203ENST00000582989 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
SPDYE4-203ENST00000582989 A1BGP04217 495 aa20.22■□□□□ 0.83
SPDYE4-203ENST00000582989 KCNA3P22001 575 aa20.22■□□□□ 0.83
SPDYE4-203ENST00000582989 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
SPDYE4-203ENST00000582989 PLEKHF1Q96S99 279 aa20.22■□□□□ 0.83
SPDYE4-203ENST00000582989 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
SPDYE4-203ENST00000582989 CHRNA5P30532 468 aa20.21■□□□□ 0.83
SPDYE4-203ENST00000582989 BICDL1Q6ZP65 573 aa20.21■□□□□ 0.83
SPDYE4-203ENST00000582989 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
SPDYE4-203ENST00000582989 ARFGEF1Q9Y6D6 1849 aa20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 SERPINB2P05120 415 aa20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 TAF7Q15545 349 aaPredicted RBP20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 NFE2L2Q16236 605 aa20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
SPDYE4-203ENST00000582989 SNRPA1P09661 255 aaKnown RBP20.19■□□□□ 0.82
SPDYE4-203ENST00000582989 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
SPDYE4-203ENST00000582989 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
SPDYE4-203ENST00000582989 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 KDM3BQ7LBC6 1761 aa20.18■□□□□ 0.82
SPDYE4-203ENST00000582989 LAMB4A4D0S4 1761 aa20.17■□□□□ 0.82
SPDYE4-203ENST00000582989 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
SPDYE4-203ENST00000582989 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
SPDYE4-203ENST00000582989 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
SPDYE4-203ENST00000582989 CARMIL3Q8ND23 1372 aa20.17■□□□□ 0.82
SPDYE4-203ENST00000582989 DLEC1Q9Y238 1755 aa20.16■□□□□ 0.82
SPDYE4-203ENST00000582989 CAMTA2O94983 1202 aa20.15■□□□□ 0.82
SPDYE4-203ENST00000582989 DZIP3Q86Y13 1208 aaKnown RBP20.15■□□□□ 0.82
SPDYE4-203ENST00000582989 GPBP1L1Q9HC44 474 aaPredicted RBP20.15■□□□□ 0.82
SPDYE4-203ENST00000582989 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
SPDYE4-203ENST00000582989 ANKRD31Q8N7Z5 1873 aa20.13■□□□□ 0.81
SPDYE4-203ENST00000582989 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
SPDYE4-203ENST00000582989 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
SPDYE4-203ENST00000582989 C2CD5Q86YS7 1000 aa20.12■□□□□ 0.81
SPDYE4-203ENST00000582989 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
SPDYE4-203ENST00000582989 PRR5LQ6MZQ0 368 aa20.1■□□□□ 0.81
SPDYE4-203ENST00000582989 CCDC24Q8N4L8 307 aa20.1■□□□□ 0.81
SPDYE4-203ENST00000582989 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
SPDYE4-203ENST00000582989 H0YIN7 160 aa20.09■□□□□ 0.81
SPDYE4-203ENST00000582989 RIPK4P57078 832 aa20.09■□□□□ 0.81
SPDYE4-203ENST00000582989 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
SPDYE4-203ENST00000582989 COL11A2P13942 1736 aaPredicted RBP20.09■□□□□ 0.81
SPDYE4-203ENST00000582989 NPHP1O15259 732 aa20.08■□□□□ 0.81
SPDYE4-203ENST00000582989 C9orf131Q5VYM1 1079 aa20.08■□□□□ 0.81
SPDYE4-203ENST00000582989 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.81
SPDYE4-203ENST00000582989 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
SPDYE4-203ENST00000582989 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
SPDYE4-203ENST00000582989 TMPOP42166 694 aaKnown RBP20.07■□□□□ 0.8
SPDYE4-203ENST00000582989 TTLL6Q8N841 843 aa20.07■□□□□ 0.8
SPDYE4-203ENST00000582989 BRIP1Q9BX63 1249 aa20.07■□□□□ 0.8
SPDYE4-203ENST00000582989 PDE6BP35913 854 aa20.06■□□□□ 0.8
SPDYE4-203ENST00000582989 WDR43Q15061 677 aaKnown RBP eCLIP20.06■□□□□ 0.8
SPDYE4-203ENST00000582989 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
SPDYE4-203ENST00000582989 TSPYL4Q9UJ04 414 aa20.06■□□□□ 0.8
SPDYE4-203ENST00000582989 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
SPDYE4-203ENST00000582989 ST5P78524 1137 aa20.05■□□□□ 0.8
SPDYE4-203ENST00000582989 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
SPDYE4-203ENST00000582989 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
SPDYE4-203ENST00000582989 RNF181Q9P0P0 153 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms