RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 EYA1Q99502 592 aa12.66□□□□□ -0.38
TOP3A-214ENST00000582981 ANKRD26Q9UPS8 1709 aa12.66□□□□□ -0.38
TOP3A-214ENST00000582981 USP25Q9UHP3 1055 aa12.66□□□□□ -0.38
TOP3A-214ENST00000582981 ROBO2Q9HCK4 1378 aa12.65□□□□□ -0.38
TOP3A-214ENST00000582981 FIBPO43427 364 aa12.65□□□□□ -0.38
TOP3A-214ENST00000582981 SURF6O75683 361 aaKnown RBP12.65□□□□□ -0.38
TOP3A-214ENST00000582981 CHMLP26374 656 aa12.65□□□□□ -0.38
TOP3A-214ENST00000582981 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-214ENST00000582981 A2ML1A8K2U0 1454 aa12.65□□□□□ -0.38
TOP3A-214ENST00000582981 ATP7BP35670 1465 aa12.65□□□□□ -0.38
TOP3A-214ENST00000582981 TSPOAP1O95153 1857 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
TOP3A-214ENST00000582981 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
TOP3A-214ENST00000582981 PIBF1Q8WXW3 757 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 CLEC17AQ6ZS10 378 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
TOP3A-214ENST00000582981 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
TOP3A-214ENST00000582981 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
TOP3A-214ENST00000582981 ERICH4A6NGS2 130 aa12.63□□□□□ -0.39
TOP3A-214ENST00000582981 COL9A3Q14050 684 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-214ENST00000582981 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
TOP3A-214ENST00000582981 PTPRCP08575 1304 aa12.63□□□□□ -0.39
TOP3A-214ENST00000582981 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
TOP3A-214ENST00000582981 NLRP6P59044 892 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 CERS3Q8IU89 383 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 CDC42BPGQ6DT37 1551 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-214ENST00000582981 KCNQ3O43525 872 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 BRD1O95696 1058 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 UBTFL1P0CB47 393 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-214ENST00000582981 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-214ENST00000582981 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
TOP3A-214ENST00000582981 LARGE1O95461 756 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-214ENST00000582981 MCCP23508 829 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 LTKP29376 864 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 CCT4P50991 539 aaKnown RBP12.61□□□□□ -0.39
TOP3A-214ENST00000582981 OS9Q13438 667 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-214ENST00000582981 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 SRGAP3O43295 1099 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 HDGFL1Q5TGJ6 251 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 USP44Q9H0E7 712 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 CRB1P82279 1406 aa12.61□□□□□ -0.39
TOP3A-214ENST00000582981 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
TOP3A-214ENST00000582981 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
TOP3A-214ENST00000582981 CLTCQ00610 1675 aaKnown RBP12.6□□□□□ -0.39
TOP3A-214ENST00000582981 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.39
TOP3A-214ENST00000582981 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
TOP3A-214ENST00000582981 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
TOP3A-214ENST00000582981 ADCY5O95622 1261 aa12.6□□□□□ -0.39
TOP3A-214ENST00000582981 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
TOP3A-214ENST00000582981 TCHHQ07283 1943 aa12.59□□□□□ -0.39
TOP3A-214ENST00000582981 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
TOP3A-214ENST00000582981 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
TOP3A-214ENST00000582981 DLC1Q96QB1 1528 aa12.59□□□□□ -0.39
TOP3A-214ENST00000582981 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-214ENST00000582981 NECAB1Q8N987 351 aa12.59□□□□□ -0.39
TOP3A-214ENST00000582981 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
TOP3A-214ENST00000582981 VPS37CA5D8V6 355 aaPredicted RBP12.58□□□□□ -0.39
TOP3A-214ENST00000582981 ATP8B2P98198 1209 aa12.58□□□□□ -0.39
TOP3A-214ENST00000582981 SPC24Q8NBT2 197 aa12.58□□□□□ -0.39
TOP3A-214ENST00000582981 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.39
TOP3A-214ENST00000582981 PPFIA3O75145 1194 aa12.58□□□□□ -0.4
TOP3A-214ENST00000582981 AK2P54819 239 aa12.58□□□□□ -0.4
TOP3A-214ENST00000582981 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-214ENST00000582981 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-214ENST00000582981 SALL3Q9BXA9 1300 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 MBD3O95983 291 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
TOP3A-214ENST00000582981 CCDC30Q5VVM6 783 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 PI4KAP2A4QPH2 592 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 GNAI3P08754 354 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 PI4KAP1Q8N8J0 262 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 CHPF2Q9P2E5 772 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
TOP3A-214ENST00000582981 OSBPL3Q9H4L5 887 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
TOP3A-214ENST00000582981 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-214ENST00000582981 SNX14Q9Y5W7 946 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 CEP170BQ9Y4F5 1589 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-214ENST00000582981 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 FOSBP53539 338 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 PTH1RQ03431 593 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 DNM1Q05193 864 aaKnown RBP12.56□□□□□ -0.4
TOP3A-214ENST00000582981 SIL1Q9H173 461 aa12.56□□□□□ -0.4
TOP3A-214ENST00000582981 CCDC66A2RUB6 948 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 CUL4AQ13619 759 aa12.55□□□□□ -0.4
TOP3A-214ENST00000582981 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-214ENST00000582981 CAMK4Q16566 473 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms