RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 MRC1P22897 1456 aa21.4■■□□□ 1.02
ERBB2-212ENST00000582788 ATP10DQ9P241 1426 aa21.4■■□□□ 1.02
ERBB2-212ENST00000582788 PRAMEF22A3QJZ6 481 aa21.39■■□□□ 1.02
ERBB2-212ENST00000582788 EVA1CP58658 441 aa21.39■■□□□ 1.02
ERBB2-212ENST00000582788 SLC39A6Q13433 755 aa21.39■■□□□ 1.02
ERBB2-212ENST00000582788 ZNF790Q6PG37 636 aa21.39■■□□□ 1.01
ERBB2-212ENST00000582788 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.01
ERBB2-212ENST00000582788 COL22A1Q8NFW1 1626 aaPredicted RBP21.39■■□□□ 1.01
ERBB2-212ENST00000582788 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
ERBB2-212ENST00000582788 IL2RBP14784 551 aa21.38■■□□□ 1.01
ERBB2-212ENST00000582788 ZCRB1Q8TBF4 217 aaKnown RBP21.38■■□□□ 1.01
ERBB2-212ENST00000582788 TRAK2O60296 914 aa21.37■■□□□ 1.01
ERBB2-212ENST00000582788 ANKRD45Q5TZF3 282 aa21.37■■□□□ 1.01
ERBB2-212ENST00000582788 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.37■■□□□ 1.01
ERBB2-212ENST00000582788 N4BP2Q86UW6 1770 aaPredicted RBP21.37■■□□□ 1.01
ERBB2-212ENST00000582788 GOLGA6L3A6NEY3 463 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 ANXA1P04083 346 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 KIF2CQ99661 725 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 BTG4Q9NY30 223 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 PCDH11XQ9BZA7 1347 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 PCDH11YQ9BZA8 1340 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 PXDNLA1KZ92 1463 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 DDX11L8A8MPP1 907 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 CEP85Q6P2H3 762 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 ANKRD44Q8N8A2 993 aa21.36■■□□□ 1.01
ERBB2-212ENST00000582788 XRCC6P12956 609 aaKnown RBP eCLIP21.35■■□□□ 1.01
ERBB2-212ENST00000582788 RPAP2Q8IXW5 612 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-212ENST00000582788 DBF4Q9UBU7 674 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-212ENST00000582788 CIZ1Q9ULV3 898 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-212ENST00000582788 COL14A1Q05707 1796 aaKnown RBP21.34■■□□□ 1.01
ERBB2-212ENST00000582788 SHANK3Q9BYB0 1731 aa21.34■■□□□ 1.01
ERBB2-212ENST00000582788 C5P01031 1676 aa21.33■■□□□ 1.01
ERBB2-212ENST00000582788 JCADQ9P266 1359 aa21.33■■□□□ 1
ERBB2-212ENST00000582788 CABP4P57796 275 aa21.33■■□□□ 1
ERBB2-212ENST00000582788 PROSER3Q2NL68 480 aa21.33■■□□□ 1
ERBB2-212ENST00000582788 TBC1D9Q6ZT07 1266 aa21.33■■□□□ 1
ERBB2-212ENST00000582788 GZF1Q9H116 711 aaPredicted RBP21.33■■□□□ 1
ERBB2-212ENST00000582788 UBE2Q2Q8WVN8 375 aa21.32■■□□□ 1
ERBB2-212ENST00000582788 ZNF496Q96IT1 587 aaPredicted RBP21.32■■□□□ 1
ERBB2-212ENST00000582788 DCTPP1Q9H773 170 aa21.31■■□□□ 1
ERBB2-212ENST00000582788 PI4KAP2A4QPH2 592 aa21.3■■□□□ 1
ERBB2-212ENST00000582788 NKX1-1Q15270 411 aaPredicted RBP21.3■■□□□ 1
ERBB2-212ENST00000582788 PI4KAP1Q8N8J0 262 aa21.3■■□□□ 1
ERBB2-212ENST00000582788 RRAGDQ9NQL2 400 aaPredicted RBP21.3■■□□□ 1
ERBB2-212ENST00000582788 TTC5Q8N0Z6 440 aa21.29■■□□□ 1
ERBB2-212ENST00000582788 DDX54Q8TDD1 881 aaKnown RBP21.29■■□□□ 1
ERBB2-212ENST00000582788 ADCY9O60503 1353 aa21.29■■□□□ 1
ERBB2-212ENST00000582788 GNAI2P04899 355 aa21.29■■□□□ 1
ERBB2-212ENST00000582788 GNAI3P08754 354 aa21.29■■□□□ 1
ERBB2-212ENST00000582788 PDIA6Q15084 440 aa21.29■■□□□ 1
ERBB2-212ENST00000582788 DNAAF4Q8WXU2 420 aa21.29■■□□□ 1
ERBB2-212ENST00000582788 TNPO1Q92973 898 aaKnown RBP21.29■■□□□ 1
ERBB2-212ENST00000582788 RAB3GAP1Q15042 981 aa21.28■■□□□ 1
ERBB2-212ENST00000582788 USP44Q9H0E7 712 aa21.28■■□□□ 1
ERBB2-212ENST00000582788 SRCIN1Q9C0H9 1055 aa21.28■■□□□ 1
ERBB2-212ENST00000582788 DDX21Q9NR30 783 aaKnown RBP eCLIP21.28■■□□□ 1
ERBB2-212ENST00000582788 CD2BP2O95400 341 aaKnown RBP21.27■■□□□ 1
ERBB2-212ENST00000582788 BEND3Q5T5X7 828 aa21.27■■□□□ 1
ERBB2-212ENST00000582788 PANK2Q9BZ23 570 aa21.27■■□□□ 1
ERBB2-212ENST00000582788 HYPKQ9NX55 129 aa21.27■■□□□ 1
ERBB2-212ENST00000582788 GLI3P10071 1580 aa21.26■□□□□ 0.99
ERBB2-212ENST00000582788 ERVV-2B6SEH9 535 aa21.26■□□□□ 0.99
ERBB2-212ENST00000582788 CDC45O75419 566 aa21.26■□□□□ 0.99
ERBB2-212ENST00000582788 FMNL2Q96PY5 1086 aa21.26■□□□□ 0.99
ERBB2-212ENST00000582788 ARXQ96QS3 562 aa21.26■□□□□ 0.99
ERBB2-212ENST00000582788 MRE11P49959 708 aa21.26■□□□□ 0.99
ERBB2-212ENST00000582788 K7ELQ4 463 aaPredicted RBP21.25■□□□□ 0.99
ERBB2-212ENST00000582788 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
ERBB2-212ENST00000582788 ISY1Q9ULR0 285 aaKnown RBP21.25■□□□□ 0.99
ERBB2-212ENST00000582788 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
ERBB2-212ENST00000582788 DISP2A7MBM2 1401 aa21.24■□□□□ 0.99
ERBB2-212ENST00000582788 GSPT1P15170 499 aaKnown RBP21.24■□□□□ 0.99
ERBB2-212ENST00000582788 KSR2Q6VAB6 950 aa21.24■□□□□ 0.99
ERBB2-212ENST00000582788 GBP4Q96PP9 640 aa21.24■□□□□ 0.99
ERBB2-212ENST00000582788 MAP3K2Q9Y2U5 619 aa21.24■□□□□ 0.99
ERBB2-212ENST00000582788 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
ERBB2-212ENST00000582788 HMMRO75330 724 aa21.23■□□□□ 0.99
ERBB2-212ENST00000582788 PLEKHM2Q8IWE5 1019 aa21.23■□□□□ 0.99
ERBB2-212ENST00000582788 TOGARAM1Q9Y4F4 1720 aa21.23■□□□□ 0.99
ERBB2-212ENST00000582788 PLCH1Q4KWH8 1693 aa21.23■□□□□ 0.99
ERBB2-212ENST00000582788 ADAMTS2O95450 1211 aa21.22■□□□□ 0.99
ERBB2-212ENST00000582788 UBTFL1P0CB47 393 aaPredicted RBP21.22■□□□□ 0.99
ERBB2-212ENST00000582788 SPATA31A6Q5VVP1 1343 aa21.22■□□□□ 0.99
ERBB2-212ENST00000582788 PAPPAQ13219 1627 aa21.22■□□□□ 0.99
ERBB2-212ENST00000582788 UBR2Q8IWV8 1755 aa21.22■□□□□ 0.99
ERBB2-212ENST00000582788 MYL6BP14649 208 aa21.21■□□□□ 0.99
ERBB2-212ENST00000582788 ATP8B2P98198 1209 aa21.21■□□□□ 0.99
ERBB2-212ENST00000582788 AIMP1Q12904 312 aaKnown RBP21.21■□□□□ 0.99
ERBB2-212ENST00000582788 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
ERBB2-212ENST00000582788 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
ERBB2-212ENST00000582788 GRPEL1Q9HAV7 217 aa21.21■□□□□ 0.99
ERBB2-212ENST00000582788 NBPF7P0C2Y1 421 aaPredicted RBP21.2■□□□□ 0.98
ERBB2-212ENST00000582788 LRP10Q7Z4F1 713 aa21.2■□□□□ 0.98
ERBB2-212ENST00000582788 LRP6O75581 1613 aa21.2■□□□□ 0.98
ERBB2-212ENST00000582788 LAMB4A4D0S4 1761 aa21.2■□□□□ 0.98
ERBB2-212ENST00000582788 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
ERBB2-212ENST00000582788 PTMSP20962 102 aa21.19■□□□□ 0.98
ERBB2-212ENST00000582788 TTC22Q5TAA0 569 aa21.19■□□□□ 0.98
ERBB2-212ENST00000582788 KCPQ6ZWJ8 1503 aa21.19■□□□□ 0.98
ERBB2-212ENST00000582788 DDX58O95786 925 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms