RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 TTC5Q8N0Z6 440 aa19.48■□□□□ 0.71
ITGB4-208ENST00000582629 GAS2L2Q8NHY3 880 aa19.48■□□□□ 0.71
ITGB4-208ENST00000582629 NARFQ9UHQ1 456 aa19.48■□□□□ 0.71
ITGB4-208ENST00000582629 ZBTB1Q9Y2K1 713 aa19.48■□□□□ 0.71
ITGB4-208ENST00000582629 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
ITGB4-208ENST00000582629 SIPA1L3O60292 1781 aaPredicted RBP19.47■□□□□ 0.71
ITGB4-208ENST00000582629 KIF3CO14782 793 aa19.47■□□□□ 0.71
ITGB4-208ENST00000582629 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
ITGB4-208ENST00000582629 NRXN2Q9P2S2 1712 aa19.46■□□□□ 0.71
ITGB4-208ENST00000582629 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
ITGB4-208ENST00000582629 HSPA6P17066 643 aa19.45■□□□□ 0.7
ITGB4-208ENST00000582629 TEFQ10587 303 aa19.45■□□□□ 0.7
ITGB4-208ENST00000582629 STARD3NLO95772 234 aa19.44■□□□□ 0.7
ITGB4-208ENST00000582629 CHRNA5P30532 468 aa19.44■□□□□ 0.7
ITGB4-208ENST00000582629 NFIXQ14938 502 aa19.44■□□□□ 0.7
ITGB4-208ENST00000582629 CANXP27824 592 aaKnown RBP19.43■□□□□ 0.7
ITGB4-208ENST00000582629 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
ITGB4-208ENST00000582629 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
ITGB4-208ENST00000582629 BCL2L12Q9HB09 334 aa19.43■□□□□ 0.7
ITGB4-208ENST00000582629 DLEC1Q9Y238 1755 aa19.42■□□□□ 0.7
ITGB4-208ENST00000582629 A0A087WZG4 1122 aa19.42■□□□□ 0.7
ITGB4-208ENST00000582629 C9orf131Q5VYM1 1079 aa19.42■□□□□ 0.7
ITGB4-208ENST00000582629 ZNF790Q6PG37 636 aa19.42■□□□□ 0.7
ITGB4-208ENST00000582629 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
ITGB4-208ENST00000582629 EIF5P55010 431 aaKnown RBP19.41■□□□□ 0.7
ITGB4-208ENST00000582629 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
ITGB4-208ENST00000582629 TEX13AQ9BXU3 409 aaPredicted RBP19.41■□□□□ 0.7
ITGB4-208ENST00000582629 SBF1O95248 1867 aa19.4■□□□□ 0.7
ITGB4-208ENST00000582629 SERPINB2P05120 415 aa19.4■□□□□ 0.7
ITGB4-208ENST00000582629 CEMIPQ8WUJ3 1361 aa19.4■□□□□ 0.7
ITGB4-208ENST00000582629 CEP350Q5VT06 3117 aa19.4■□□□□ 0.7
ITGB4-208ENST00000582629 SCN7AQ01118 1682 aa19.4■□□□□ 0.7
ITGB4-208ENST00000582629 TOMM70O94826 608 aa19.39■□□□□ 0.69
ITGB4-208ENST00000582629 PRKAR2BP31323 418 aa19.39■□□□□ 0.69
ITGB4-208ENST00000582629 RSPH6AQ9H0K4 717 aa19.39■□□□□ 0.69
ITGB4-208ENST00000582629 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
ITGB4-208ENST00000582629 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
ITGB4-208ENST00000582629 RNF181Q9P0P0 153 aa19.38■□□□□ 0.69
ITGB4-208ENST00000582629 PHACTR3Q96KR7 559 aa19.37■□□□□ 0.69
ITGB4-208ENST00000582629 NMRK2Q9NPI5 230 aa19.37■□□□□ 0.69
ITGB4-208ENST00000582629 IL6STP40189 918 aaPredicted RBP19.36■□□□□ 0.69
ITGB4-208ENST00000582629 CARMIL3Q8ND23 1372 aa19.35■□□□□ 0.69
ITGB4-208ENST00000582629 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
ITGB4-208ENST00000582629 BTBD11A6QL63 1104 aa19.35■□□□□ 0.69
ITGB4-208ENST00000582629 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
ITGB4-208ENST00000582629 BICDL1Q6ZP65 573 aa19.35■□□□□ 0.69
ITGB4-208ENST00000582629 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
ITGB4-208ENST00000582629 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
ITGB4-208ENST00000582629 C2CD5Q86YS7 1000 aa19.34■□□□□ 0.69
ITGB4-208ENST00000582629 TTLL6Q8N841 843 aa19.34■□□□□ 0.69
ITGB4-208ENST00000582629 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
ITGB4-208ENST00000582629 ANKRD31Q8N7Z5 1873 aa19.34■□□□□ 0.69
ITGB4-208ENST00000582629 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.69
ITGB4-208ENST00000582629 H0YIN7 160 aa19.33■□□□□ 0.68
ITGB4-208ENST00000582629 APLP1P51693 650 aa19.33■□□□□ 0.68
ITGB4-208ENST00000582629 TBC1D9BQ66K14 1250 aa19.33■□□□□ 0.68
ITGB4-208ENST00000582629 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
ITGB4-208ENST00000582629 TBC1D2BQ9UPU7 963 aa19.33■□□□□ 0.68
ITGB4-208ENST00000582629 BCORQ6W2J9 1755 aa19.32■□□□□ 0.68
ITGB4-208ENST00000582629 ZC3H4Q9UPT8 1303 aaKnown RBP19.32■□□□□ 0.68
ITGB4-208ENST00000582629 KCNQ3O43525 872 aa19.32■□□□□ 0.68
ITGB4-208ENST00000582629 A1BGP04217 495 aa19.32■□□□□ 0.68
ITGB4-208ENST00000582629 C16orf71Q8IYS4 520 aaPredicted RBP19.32■□□□□ 0.68
ITGB4-208ENST00000582629 RBM46Q8TBY0 533 aaKnown RBP19.32■□□□□ 0.68
ITGB4-208ENST00000582629 RTF1Q92541 710 aaKnown RBP19.32■□□□□ 0.68
ITGB4-208ENST00000582629 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
ITGB4-208ENST00000582629 RASSF7Q02833 373 aa19.31■□□□□ 0.68
ITGB4-208ENST00000582629 CCDC88AQ3V6T2 1871 aa19.31■□□□□ 0.68
ITGB4-208ENST00000582629 LMNB1P20700 586 aa19.3■□□□□ 0.68
ITGB4-208ENST00000582629 COL11A2P13942 1736 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-208ENST00000582629 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
ITGB4-208ENST00000582629 CAMTA2O94983 1202 aa19.29■□□□□ 0.68
ITGB4-208ENST00000582629 PDE6BP35913 854 aa19.29■□□□□ 0.68
ITGB4-208ENST00000582629 PRR5LQ6MZQ0 368 aa19.29■□□□□ 0.68
ITGB4-208ENST00000582629 BRIP1Q9BX63 1249 aa19.29■□□□□ 0.68
ITGB4-208ENST00000582629 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
ITGB4-208ENST00000582629 SNRPA1P09661 255 aaKnown RBP19.28■□□□□ 0.68
ITGB4-208ENST00000582629 MCM10Q7L590 875 aa19.28■□□□□ 0.68
ITGB4-208ENST00000582629 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
ITGB4-208ENST00000582629 RRAGCQ9HB90 399 aa19.28■□□□□ 0.68
ITGB4-208ENST00000582629 FSTL1Q12841 308 aa19.27■□□□□ 0.68
ITGB4-208ENST00000582629 DZIP3Q86Y13 1208 aaKnown RBP19.27■□□□□ 0.68
ITGB4-208ENST00000582629 USP16Q9Y5T5 823 aa19.27■□□□□ 0.68
ITGB4-208ENST00000582629 WDR90Q96KV7 1748 aa19.27■□□□□ 0.68
ITGB4-208ENST00000582629 PRELPP51888 382 aa19.26■□□□□ 0.67
ITGB4-208ENST00000582629 CNBD1Q8NA66 436 aa19.26■□□□□ 0.67
ITGB4-208ENST00000582629 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.67
ITGB4-208ENST00000582629 FER1L6Q2WGJ9 1857 aa19.25■□□□□ 0.67
ITGB4-208ENST00000582629 PRAMEF22A3QJZ6 481 aa19.25■□□□□ 0.67
ITGB4-208ENST00000582629 NFKBIEO00221 500 aa19.25■□□□□ 0.67
ITGB4-208ENST00000582629 NPHP1O15259 732 aa19.25■□□□□ 0.67
ITGB4-208ENST00000582629 ST5P78524 1137 aa19.25■□□□□ 0.67
ITGB4-208ENST00000582629 CCDC24Q8N4L8 307 aa19.25■□□□□ 0.67
ITGB4-208ENST00000582629 DLG5Q8TDM6 1919 aa19.24■□□□□ 0.67
ITGB4-208ENST00000582629 DICER1Q9UPY3 1922 aaKnown RBP19.24■□□□□ 0.67
ITGB4-208ENST00000582629 PIP4K2AP48426 406 aaPredicted RBP19.24■□□□□ 0.67
ITGB4-208ENST00000582629 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
ITGB4-208ENST00000582629 CACNA1SQ13698 1873 aa19.24■□□□□ 0.67
ITGB4-208ENST00000582629 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
ITGB4-208ENST00000582629 GLTPD2A6NH11 291 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms