RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 AKAP2Q9Y2D5 859 aa12.32□□□□□ -0.44
TRAPPC8-211ENST00000582539 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 PSMA5P28066 241 aa12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 KCNJ4P48050 445 aa12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 RAD50Q92878 1312 aa12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 TRIM6-TRIM34B2RNG4 842 aa12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 RLBP1P12271 317 aa12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
TRAPPC8-211ENST00000582539 IGHDP01880 384 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 SNX21Q969T3 373 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 ZSCAN25Q6NSZ9 544 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 MX1P20591 662 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
TRAPPC8-211ENST00000582539 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
TRAPPC8-211ENST00000582539 OSBPL3Q9H4L5 887 aa12.29□□□□□ -0.44
TRAPPC8-211ENST00000582539 KRT32Q14532 448 aa12.29□□□□□ -0.44
TRAPPC8-211ENST00000582539 PLBD2Q8NHP8 589 aa12.29□□□□□ -0.44
TRAPPC8-211ENST00000582539 ANKRD1Q15327 319 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 RGL2O15211 777 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 GRM8O00222 908 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 XPCQ01831 940 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 LMO7Q8WWI1 1683 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 AK7Q96M32 723 aa12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 CWC25Q9NXE8 425 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC8-211ENST00000582539 GIGYF1O75420 1035 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC8-211ENST00000582539 USHBP1Q8N6Y0 703 aa12.27□□□□□ -0.45
TRAPPC8-211ENST00000582539 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC8-211ENST00000582539 IGSF3O75054 1194 aa12.27□□□□□ -0.45
TRAPPC8-211ENST00000582539 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 ZSCAN31Q96LW9 406 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 LTN1O94822 1766 aa12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 MTX1Q13505 466 aa12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 CCDC191Q8NCU4 936 aa12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 SSH3Q8TE77 659 aa12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
TRAPPC8-211ENST00000582539 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 EVI5LQ96CN4 794 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 FBLN1P23142 703 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 RBM25P49756 843 aaKnown RBP12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 STRN4Q9NRL3 753 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 HSPA2P54652 639 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 RFX7Q2KHR2 1363 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 PI4KAP2A4QPH2 592 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 TMED8Q6PL24 325 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 PI4KAP1Q8N8J0 262 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 ECHDC1Q9NTX5 307 aa12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
TRAPPC8-211ENST00000582539 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 PEAK1Q9H792 1746 aa12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 STAP2Q9UGK3 403 aa12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 COL15A1P39059 1388 aa12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.24□□□□□ -0.452e-6■■■■■ 27.7
TRAPPC8-211ENST00000582539 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
TRAPPC8-211ENST00000582539 PARP10Q53GL7 1025 aa12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 CCDC158Q5M9N0 1113 aa12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 MEIS3Q99687 375 aa12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 PHF14O94880 888 aa12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 PXDNQ92626 1479 aa12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 RILPL2Q969X0 211 aa12.23□□□□□ -0.45
TRAPPC8-211ENST00000582539 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 RHPN1Q8TCX5 695 aa12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 CTNNA3Q9UI47 895 aa12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 ZFYP08048 801 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 TRPM3Q9HCF6 1732 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 PDCP20941 246 aa12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 PDE1AP54750 535 aa12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-211ENST00000582539 HMGB1P09429 215 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-211ENST00000582539 PPP1R42Q7Z4L9 355 aa12.21□□□□□ -0.45
TRAPPC8-211ENST00000582539 CEP126Q9P2H0 1117 aa12.21□□□□□ -0.45
TRAPPC8-211ENST00000582539 MEX3CQ5U5Q3 659 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-211ENST00000582539 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-211ENST00000582539 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.46
TRAPPC8-211ENST00000582539 ALS2Q96Q42 1657 aa12.21□□□□□ -0.46
TRAPPC8-211ENST00000582539 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.46
TRAPPC8-211ENST00000582539 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
TRAPPC8-211ENST00000582539 CAMTA1Q9Y6Y1 1673 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms