RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 POTECB2RU33 542 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 FYB1O15117 783 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 MLLT1Q03111 559 aaPredicted RBP11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 POLR3GLQ9BT43 218 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 GGNBP2Q9H3C7 697 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 CACNA1SQ13698 1873 aa11.82□□□□□ -0.52
PDLIM1P3-201ENST00000582370 FKBP8Q14318 412 aa11.81□□□□□ -0.52
PDLIM1P3-201ENST00000582370 RBM42Q9BTD8 480 aaKnown RBP11.81□□□□□ -0.52
PDLIM1P3-201ENST00000582370 ARFGEF2Q9Y6D5 1785 aa11.81□□□□□ -0.52
PDLIM1P3-201ENST00000582370 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
PDLIM1P3-201ENST00000582370 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
PDLIM1P3-201ENST00000582370 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
PDLIM1P3-201ENST00000582370 WBP1LQ9NX94 342 aa11.8□□□□□ -0.52
PDLIM1P3-201ENST00000582370 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
PDLIM1P3-201ENST00000582370 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 NFKBIEO00221 500 aa11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 RGS19P49795 217 aa11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 LBX1P52954 281 aa11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 PANK3Q9H999 370 aa11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 COL11A2P13942 1736 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
PDLIM1P3-201ENST00000582370 ADAMTSL1Q8N6G6 1762 aa11.78□□□□□ -0.52
PDLIM1P3-201ENST00000582370 TM4SF1P30408 202 aa11.78□□□□□ -0.52
PDLIM1P3-201ENST00000582370 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
PDLIM1P3-201ENST00000582370 TTLL6Q8N841 843 aa11.78□□□□□ -0.52
PDLIM1P3-201ENST00000582370 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.52
PDLIM1P3-201ENST00000582370 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
PDLIM1P3-201ENST00000582370 HSPA8P11142 646 aaKnown RBP11.77□□□□□ -0.53
PDLIM1P3-201ENST00000582370 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
PDLIM1P3-201ENST00000582370 VEGFBP49765 207 aa11.77□□□□□ -0.53
PDLIM1P3-201ENST00000582370 EMILIN1Q9Y6C2 1016 aa11.77□□□□□ -0.53
PDLIM1P3-201ENST00000582370 PDE4DIPQ5VU43 2346 aa11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 PER1O15534 1290 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 ANP32CO43423 234 aa11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 RALBP1Q15311 655 aa11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 EYA1Q99502 592 aa11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 TNRC18O15417 2968 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1P3-201ENST00000582370 IQCA1LA6NCM1 817 aa11.75□□□□□ -0.53
PDLIM1P3-201ENST00000582370 ZPR1O75312 459 aa11.75□□□□□ -0.53
PDLIM1P3-201ENST00000582370 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
PDLIM1P3-201ENST00000582370 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
PDLIM1P3-201ENST00000582370 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
PDLIM1P3-201ENST00000582370 LDHDQ86WU2 507 aa11.75□□□□□ -0.53
PDLIM1P3-201ENST00000582370 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
PDLIM1P3-201ENST00000582370 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
PDLIM1P3-201ENST00000582370 LTBP3Q9NS15 1303 aa11.74□□□□□ -0.53
PDLIM1P3-201ENST00000582370 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
PDLIM1P3-201ENST00000582370 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
PDLIM1P3-201ENST00000582370 H0YIN7 160 aa11.73□□□□□ -0.53
PDLIM1P3-201ENST00000582370 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
PDLIM1P3-201ENST00000582370 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
PDLIM1P3-201ENST00000582370 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
PDLIM1P3-201ENST00000582370 CARMIL3Q8ND23 1372 aa11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 PTCD1O75127 700 aaKnown RBP11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 CABP4P57796 275 aa11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 NFIXQ14938 502 aa11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 SLX4Q8IY92 1834 aa11.72□□□□□ -0.53
PDLIM1P3-201ENST00000582370 COL15A1P39059 1388 aa11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 SERPINB2P05120 415 aa11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 DEFB115Q30KQ5 88 aa11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 L3MBTL3Q96JM7 780 aaPredicted RBP11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 CARD14Q9BXL6 1004 aa11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.53
PDLIM1P3-201ENST00000582370 LTBP1Q14766 1721 aa11.71□□□□□ -0.54
PDLIM1P3-201ENST00000582370 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
PDLIM1P3-201ENST00000582370 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
PDLIM1P3-201ENST00000582370 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
PDLIM1P3-201ENST00000582370 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
PDLIM1P3-201ENST00000582370 C21orf2O43822 256 aa11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 AMOTQ4VCS5 1084 aa11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 MORC1Q86VD1 984 aa11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
PDLIM1P3-201ENST00000582370 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 CCER2I3L3R5 266 aa11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 PDE6BP35913 854 aa11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 MTHFSP49914 203 aa11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 EIF4A2Q14240 407 aaKnown RBP11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 ZNF622Q969S3 477 aaKnown RBP eCLIP11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 MRC1P22897 1456 aa11.67□□□□□ -0.54
PDLIM1P3-201ENST00000582370 EAPPQ56P03 285 aaPredicted RBP11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 C1orf141Q5JVX7 400 aa11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms