RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 ADAMTS8Q9UP79 889 aa8.79□□□□□ -1
NF1-221ENST00000581790 BRD4O60885 1362 aaPredicted RBP8.78□□□□□ -1
NF1-221ENST00000581790 PTPRNQ16849 979 aa8.78□□□□□ -1
NF1-221ENST00000581790 FAM9BQ8IZU0 186 aa8.78□□□□□ -1
NF1-221ENST00000581790 ZNF511Q8NB15 262 aa8.78□□□□□ -1
NF1-221ENST00000581790 BAP1Q92560 729 aa8.78□□□□□ -1
NF1-221ENST00000581790 SETD1AO15047 1707 aaKnown RBP8.77□□□□□ -1
NF1-221ENST00000581790 PARD3Q8TEW0 1356 aa8.77□□□□□ -1.01
NF1-221ENST00000581790 MDM2Q00987 491 aaPredicted RBP8.77□□□□□ -1.01
NF1-221ENST00000581790 IDI1Q13907 227 aa8.77□□□□□ -1.01
NF1-221ENST00000581790 CNGB1Q14028 1251 aaPredicted RBP8.77□□□□□ -1.01
NF1-221ENST00000581790 CCDC184Q52MB2 194 aa8.77□□□□□ -1.01
NF1-221ENST00000581790 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
NF1-221ENST00000581790 C14orf93Q9H972 538 aaKnown RBP8.77□□□□□ -1.01
NF1-221ENST00000581790 CENPJQ9HC77 1338 aaPredicted RBP8.77□□□□□ -1.01
NF1-221ENST00000581790 ASXL1Q8IXJ9 1541 aa8.76□□□□□ -1.01
NF1-221ENST00000581790 C6orf118Q5T5N4 469 aa8.76□□□□□ -1.01
NF1-221ENST00000581790 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
NF1-221ENST00000581790 PANK3Q9H999 370 aa8.76□□□□□ -1.01
NF1-221ENST00000581790 UBR1Q8IWV7 1749 aa8.76□□□□□ -1.01
NF1-221ENST00000581790 KNDC1Q76NI1 1749 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 PER1O15534 1290 aaPredicted RBP8.75□□□□□ -1.01
NF1-221ENST00000581790 GPAT2Q6NUI2 795 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 ZFAND3Q9H8U3 227 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 DNMT3AQ9Y6K1 912 aaPredicted RBP8.75□□□□□ -1.01
NF1-221ENST00000581790 USP32Q8NFA0 1604 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 C3P01024 1663 aa8.75□□□□□ -1.01
NF1-221ENST00000581790 ANKRD26Q9UPS8 1709 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 ALKQ9UM73 1620 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
NF1-221ENST00000581790 NEFLP07196 543 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 MAP2K5Q13163 448 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 MLECQ14165 292 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
NF1-221ENST00000581790 C6orf229H3BNL8 230 aa8.73□□□□□ -1.01
NF1-221ENST00000581790 IGHA1P01876 353 aa8.73□□□□□ -1.01
NF1-221ENST00000581790 KCNH2Q12809 1159 aa8.73□□□□□ -1.01
NF1-221ENST00000581790 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
NF1-221ENST00000581790 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
NF1-221ENST00000581790 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
NF1-221ENST00000581790 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
NF1-221ENST00000581790 TRAK1Q9UPV9 953 aa8.73□□□□□ -1.01
NF1-221ENST00000581790 A2ML1A8K2U0 1454 aa8.72□□□□□ -1.01
NF1-221ENST00000581790 XP32Q5T750 250 aa8.72□□□□□ -1.01
NF1-221ENST00000581790 FBXO31Q5XUX0 539 aaPredicted RBP8.72□□□□□ -1.01
NF1-221ENST00000581790 ZNF385CQ66K41 422 aaPredicted RBP8.72□□□□□ -1.01
NF1-221ENST00000581790 FAM174AQ8TBP5 190 aa8.72□□□□□ -1.01
NF1-221ENST00000581790 KIF20BQ96Q89 1820 aa8.72□□□□□ -1.01
NF1-221ENST00000581790 NPC1L1Q9UHC9 1359 aa8.72□□□□□ -1.01
NF1-221ENST00000581790 FDX1P10109 184 aa8.71□□□□□ -1.02
NF1-221ENST00000581790 CC2D1BQ5T0F9 858 aaKnown RBP8.71□□□□□ -1.02
NF1-221ENST00000581790 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
NF1-221ENST00000581790 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.02
NF1-221ENST00000581790 PNISRQ8TF01 805 aaKnown RBP8.71□□□□□ -1.02
NF1-221ENST00000581790 DNMT3LQ9UJW3 386 aa8.71□□□□□ -1.02
NF1-221ENST00000581790 NRXN3Q9Y4C0 1643 aa8.71□□□□□ -1.02
NF1-221ENST00000581790 LRPPRCP42704 1394 aaKnown RBP8.71□□□□□ -1.02
NF1-221ENST00000581790 ZMYM3Q14202 1370 aa8.71□□□□□ -1.02
NF1-221ENST00000581790 RIMS2Q9UQ26 1411 aa8.71□□□□□ -1.02
NF1-221ENST00000581790 DLC1Q96QB1 1528 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 TULP4Q9NRJ4 1543 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 BMP2P12643 396 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 IRS1P35568 1242 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 TMEM132EQ6IEE7 984 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 SVOPQ8N4V2 548 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 PUS7Q96PZ0 661 aaKnown RBP8.7□□□□□ -1.02
NF1-221ENST00000581790 CDK15Q96Q40 435 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 SUPT16HQ9Y5B9 1047 aaKnown RBP8.7□□□□□ -1.02
NF1-221ENST00000581790 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
NF1-221ENST00000581790 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 INSRP06213 1382 aa8.7□□□□□ -1.02
NF1-221ENST00000581790 NR3C2P08235 984 aa8.69□□□□□ -1.02
NF1-221ENST00000581790 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
NF1-221ENST00000581790 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
NF1-221ENST00000581790 FAM217BQ9NTX9 383 aaPredicted RBP8.69□□□□□ -1.02
NF1-221ENST00000581790 TNRQ92752 1358 aa8.69□□□□□ -1.02
NF1-221ENST00000581790 YTHDC2Q9H6S0 1430 aaKnown RBP8.69□□□□□ -1.02
NF1-221ENST00000581790 PTPRMP28827 1452 aa8.69□□□□□ -1.02
NF1-221ENST00000581790 ITSN1Q15811 1721 aa8.68□□□□□ -1.02
NF1-221ENST00000581790 UPP2O95045 317 aa8.68□□□□□ -1.02
NF1-221ENST00000581790 COL25A1Q9BXS0 654 aaPredicted RBP8.68□□□□□ -1.02
NF1-221ENST00000581790 IRF6O14896 467 aa8.67□□□□□ -1.02
NF1-221ENST00000581790 FOXK2Q01167 660 aa8.67□□□□□ -1.02
NF1-221ENST00000581790 NLRP1Q9C000 1473 aa8.67□□□□□ -1.02
NF1-221ENST00000581790 GPCPD1Q9NPB8 672 aa8.67□□□□□ -1.02
NF1-221ENST00000581790 NINLQ9Y2I6 1382 aa8.67□□□□□ -1.02
NF1-221ENST00000581790 RIMS1Q86UR5 1692 aaKnown RBP8.66□□□□□ -1.02
NF1-221ENST00000581790 BLMP54132 1417 aaPredicted RBP8.66□□□□□ -1.02
NF1-221ENST00000581790 SMG6Q86US8 1419 aaKnown RBP8.66□□□□□ -1.02
NF1-221ENST00000581790 NR5A1Q13285 461 aa8.66□□□□□ -1.02
NF1-221ENST00000581790 ARID5BQ14865 1188 aa8.66□□□□□ -1.02
NF1-221ENST00000581790 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
NF1-221ENST00000581790 SETD1BQ9UPS6 1966 aaKnown RBP8.66□□□□□ -1.02
NF1-221ENST00000581790 AKAP12Q02952 1782 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms