RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 DDR1Q08345 913 aa25.93■■□□□ 1.74
RAB11FIP4-207ENST00000581460 RTF1Q92541 710 aaKnown RBP25.93■■□□□ 1.74
RAB11FIP4-207ENST00000581460 KIF13BQ9NQT8 1826 aa25.93■■□□□ 1.74
RAB11FIP4-207ENST00000581460 ZNF496Q96IT1 587 aaPredicted RBP25.92■■□□□ 1.74
RAB11FIP4-207ENST00000581460 NARFQ9UHQ1 456 aa25.92■■□□□ 1.74
RAB11FIP4-207ENST00000581460 FCHSD2O94868 740 aa25.91■■□□□ 1.74
RAB11FIP4-207ENST00000581460 TEX13AQ9BXU3 409 aaPredicted RBP25.91■■□□□ 1.74
RAB11FIP4-207ENST00000581460 HEG1Q9ULI3 1381 aa25.91■■□□□ 1.74
RAB11FIP4-207ENST00000581460 BTBD11A6QL63 1104 aa25.9■■□□□ 1.74
RAB11FIP4-207ENST00000581460 POLRMTO00411 1230 aaKnown RBP25.9■■□□□ 1.74
RAB11FIP4-207ENST00000581460 FMNL2Q96PY5 1086 aa25.9■■□□□ 1.74
RAB11FIP4-207ENST00000581460 CEMIPQ8WUJ3 1361 aa25.9■■□□□ 1.74
RAB11FIP4-207ENST00000581460 N4BP2Q86UW6 1770 aaPredicted RBP25.9■■□□□ 1.74
RAB11FIP4-207ENST00000581460 TM4SF1P30408 202 aa25.89■■□□□ 1.74
RAB11FIP4-207ENST00000581460 GPBP1L1Q9HC44 474 aaPredicted RBP25.89■■□□□ 1.74
RAB11FIP4-207ENST00000581460 UBR2Q8IWV8 1755 aa25.88■■□□□ 1.73
RAB11FIP4-207ENST00000581460 A0A087WZG4 1122 aa25.88■■□□□ 1.73
RAB11FIP4-207ENST00000581460 NEFMP07197 916 aa25.88■■□□□ 1.73
RAB11FIP4-207ENST00000581460 ZNF526Q8TF50 670 aaPredicted RBP25.88■■□□□ 1.73
RAB11FIP4-207ENST00000581460 ZNF330Q9Y3S2 320 aaPredicted RBP25.88■■□□□ 1.73
RAB11FIP4-207ENST00000581460 ARHGAP27Q6ZUM4 889 aa25.87■■□□□ 1.73
RAB11FIP4-207ENST00000581460 NPM2Q86SE8 214 aaKnown RBP25.87■■□□□ 1.73
RAB11FIP4-207ENST00000581460 PIM2Q9P1W9 311 aa25.87■■□□□ 1.73
RAB11FIP4-207ENST00000581460 ADCY9O60503 1353 aa25.86■■□□□ 1.73
RAB11FIP4-207ENST00000581460 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
RAB11FIP4-207ENST00000581460 NFIXQ14938 502 aa25.86■■□□□ 1.73
RAB11FIP4-207ENST00000581460 KIAA1551Q9HCM1 1747 aa25.85■■□□□ 1.73
RAB11FIP4-207ENST00000581460 MCM10Q7L590 875 aa25.85■■□□□ 1.73
RAB11FIP4-207ENST00000581460 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
RAB11FIP4-207ENST00000581460 DALRD3Q5D0E6 543 aaKnown RBP25.84■■□□□ 1.73
RAB11FIP4-207ENST00000581460 KCNQ3O43525 872 aa25.83■■□□□ 1.73
RAB11FIP4-207ENST00000581460 KCNA3P22001 575 aa25.83■■□□□ 1.73
RAB11FIP4-207ENST00000581460 CHRNA5P30532 468 aa25.83■■□□□ 1.73
RAB11FIP4-207ENST00000581460 BCL2L12Q9HB09 334 aa25.83■■□□□ 1.73
RAB11FIP4-207ENST00000581460 SIPA1L3O60292 1781 aaPredicted RBP25.82■■□□□ 1.72
RAB11FIP4-207ENST00000581460 SERPINB2P05120 415 aa25.82■■□□□ 1.72
RAB11FIP4-207ENST00000581460 BICDL1Q6ZP65 573 aa25.82■■□□□ 1.72
RAB11FIP4-207ENST00000581460 HTATSF1O43719 755 aaKnown RBP25.81■■□□□ 1.72
RAB11FIP4-207ENST00000581460 IL6STP40189 918 aaPredicted RBP25.81■■□□□ 1.72
RAB11FIP4-207ENST00000581460 A1BGP04217 495 aa25.8■■□□□ 1.72
RAB11FIP4-207ENST00000581460 DCTN1Q14203 1278 aa25.8■■□□□ 1.72
RAB11FIP4-207ENST00000581460 TBC1D2BQ9UPU7 963 aa25.79■■□□□ 1.72
RAB11FIP4-207ENST00000581460 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
RAB11FIP4-207ENST00000581460 USP16Q9Y5T5 823 aa25.76■■□□□ 1.71
RAB11FIP4-207ENST00000581460 BRCA1P38398 1863 aaKnown RBP25.75■■□□□ 1.71
RAB11FIP4-207ENST00000581460 TAF7Q15545 349 aaPredicted RBP25.75■■□□□ 1.71
RAB11FIP4-207ENST00000581460 TBC1D9BQ66K14 1250 aa25.75■■□□□ 1.71
RAB11FIP4-207ENST00000581460 PNNQ9H307 717 aaKnown RBP25.75■■□□□ 1.71
RAB11FIP4-207ENST00000581460 MAPK8IP3Q9UPT6 1336 aa25.73■■□□□ 1.71
RAB11FIP4-207ENST00000581460 NPHP1O15259 732 aa25.73■■□□□ 1.71
RAB11FIP4-207ENST00000581460 C9orf131Q5VYM1 1079 aa25.73■■□□□ 1.71
RAB11FIP4-207ENST00000581460 DZIP3Q86Y13 1208 aaKnown RBP25.73■■□□□ 1.71
RAB11FIP4-207ENST00000581460 C2CD5Q86YS7 1000 aa25.73■■□□□ 1.71
RAB11FIP4-207ENST00000581460 PRAMEF22A3QJZ6 481 aa25.72■■□□□ 1.71
RAB11FIP4-207ENST00000581460 PIP4K2AP48426 406 aaPredicted RBP25.72■■□□□ 1.71
RAB11FIP4-207ENST00000581460 RALBP1Q15311 655 aa25.72■■□□□ 1.71
RAB11FIP4-207ENST00000581460 AFDNP55196 1824 aaKnown RBP25.72■■□□□ 1.71
RAB11FIP4-207ENST00000581460 CARMIL3Q8ND23 1372 aa25.71■■□□□ 1.71
RAB11FIP4-207ENST00000581460 H0YIN7 160 aa25.71■■□□□ 1.71
RAB11FIP4-207ENST00000581460 CAMTA2O94983 1202 aa25.71■■□□□ 1.71
RAB11FIP4-207ENST00000581460 SETDB2Q96T68 719 aa25.71■■□□□ 1.71
RAB11FIP4-207ENST00000581460 ARFGEF1Q9Y6D6 1849 aa25.71■■□□□ 1.71
RAB11FIP4-207ENST00000581460 NFE2L2Q16236 605 aa25.7■■□□□ 1.7
RAB11FIP4-207ENST00000581460 NRXN2Q9P2S2 1712 aa25.7■■□□□ 1.7
RAB11FIP4-207ENST00000581460 SCN7AQ01118 1682 aa25.69■■□□□ 1.7
RAB11FIP4-207ENST00000581460 TTLL6Q8N841 843 aa25.69■■□□□ 1.7
RAB11FIP4-207ENST00000581460 PNISRQ8TF01 805 aaKnown RBP25.69■■□□□ 1.7
RAB11FIP4-207ENST00000581460 PLEKHF1Q96S99 279 aa25.69■■□□□ 1.7
RAB11FIP4-207ENST00000581460 MIS18AQ9NYP9 233 aa25.69■■□□□ 1.7
RAB11FIP4-207ENST00000581460 RNF181Q9P0P0 153 aa25.69■■□□□ 1.7
RAB11FIP4-207ENST00000581460 DDX10Q13206 875 aaKnown RBP25.68■■□□□ 1.7
RAB11FIP4-207ENST00000581460 PDE6BP35913 854 aa25.67■■□□□ 1.7
RAB11FIP4-207ENST00000581460 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
RAB11FIP4-207ENST00000581460 CNBD1Q8NA66 436 aa25.67■■□□□ 1.7
RAB11FIP4-207ENST00000581460 ZNF652Q9Y2D9 606 aa25.67■■□□□ 1.7
RAB11FIP4-207ENST00000581460 CCDC24Q8N4L8 307 aa25.66■■□□□ 1.7
RAB11FIP4-207ENST00000581460 ZNF622Q969S3 477 aaKnown RBP eCLIP25.66■■□□□ 1.7
RAB11FIP4-207ENST00000581460 BRIP1Q9BX63 1249 aa25.66■■□□□ 1.7
RAB11FIP4-207ENST00000581460 PDZRN3Q9UPQ7 1066 aa25.66■■□□□ 1.7
RAB11FIP4-207ENST00000581460 KIF3CO14782 793 aa25.65■■□□□ 1.7
RAB11FIP4-207ENST00000581460 ST5P78524 1137 aa25.65■■□□□ 1.7
RAB11FIP4-207ENST00000581460 RASSF7Q02833 373 aa25.63■■□□□ 1.69
RAB11FIP4-207ENST00000581460 CLEC4GQ6UXB4 293 aa25.63■■□□□ 1.69
RAB11FIP4-207ENST00000581460 THUMPD2Q9BTF0 503 aaKnown RBP25.63■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NBPF26B4DH59 902 aa25.62■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NBPF10Q6P3W6 841 aaKnown RBP25.62■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NBPF15Q8N660 670 aa25.62■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NBPF5PQ86XG9 351 aaPredicted RBP25.61■■□□□ 1.69
RAB11FIP4-207ENST00000581460 MYBBP1AQ9BQG0 1328 aaKnown RBP25.61■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NMRK2Q9NPI5 230 aa25.6■■□□□ 1.69
RAB11FIP4-207ENST00000581460 KDM2BQ8NHM5 1336 aa25.6■■□□□ 1.69
RAB11FIP4-207ENST00000581460 DLG5Q8TDM6 1919 aa25.59■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NIP7Q9Y221 180 aaKnown RBP eCLIP25.59■■□□□ 1.69
RAB11FIP4-207ENST00000581460 BCORQ6W2J9 1755 aa25.59■■□□□ 1.69
RAB11FIP4-207ENST00000581460 HSPA6P17066 643 aa25.58■■□□□ 1.69
RAB11FIP4-207ENST00000581460 LMNB1P20700 586 aa25.58■■□□□ 1.69
RAB11FIP4-207ENST00000581460 RIPK4P57078 832 aa25.58■■□□□ 1.69
RAB11FIP4-207ENST00000581460 EIF4A1P60842 406 aaKnown RBP25.58■■□□□ 1.69
RAB11FIP4-207ENST00000581460 C16orf71Q8IYS4 520 aaPredicted RBP25.58■■□□□ 1.69
RAB11FIP4-207ENST00000581460 NGEFQ8N5V2 710 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms