RNA–Protein interactions for RNA: ENST00000581246.5

MSL1-208, Transcript of male specific lethal 1 homolog, humanhuman

TSL 4

Gene MSL1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-208ENST00000581246 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
MSL1-208ENST00000581246 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
MSL1-208ENST00000581246 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
MSL1-208ENST00000581246 USP21Q9UK80 565 aa13.1□□□□□ -0.31
MSL1-208ENST00000581246 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
MSL1-208ENST00000581246 DDB1Q16531 1140 aa13.09□□□□□ -0.31
MSL1-208ENST00000581246 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
MSL1-208ENST00000581246 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
MSL1-208ENST00000581246 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
MSL1-208ENST00000581246 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
MSL1-208ENST00000581246 CHMP4AQ9BY43 222 aa13.09□□□□□ -0.31
MSL1-208ENST00000581246 BCL9O00512 1426 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 ATRNO75882 1429 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
MSL1-208ENST00000581246 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
MSL1-208ENST00000581246 PDIA6Q15084 440 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 PIGBQ92521 554 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 ZBTB40Q9NUA8 1239 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 DDX19BQ9UMR2 479 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 AFF2P51816 1311 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
MSL1-208ENST00000581246 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
MSL1-208ENST00000581246 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
MSL1-208ENST00000581246 FLIIQ13045 1269 aa13.07□□□□□ -0.32
MSL1-208ENST00000581246 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
MSL1-208ENST00000581246 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
MSL1-208ENST00000581246 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
MSL1-208ENST00000581246 FAM98CQ17RN3 349 aaKnown RBP13.06□□□□□ -0.32
MSL1-208ENST00000581246 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
MSL1-208ENST00000581246 LRP10Q7Z4F1 713 aa13.06□□□□□ -0.32
MSL1-208ENST00000581246 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
MSL1-208ENST00000581246 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
MSL1-208ENST00000581246 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
MSL1-208ENST00000581246 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
MSL1-208ENST00000581246 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
MSL1-208ENST00000581246 MEX3CQ5U5Q3 659 aaKnown RBP13.05□□□□□ -0.32
MSL1-208ENST00000581246 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
MSL1-208ENST00000581246 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
MSL1-208ENST00000581246 GJD4Q96KN9 370 aaPredicted RBP13.05□□□□□ -0.32
MSL1-208ENST00000581246 DDX21Q9NR30 783 aaKnown RBP eCLIP13.05□□□□□ -0.32
MSL1-208ENST00000581246 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
MSL1-208ENST00000581246 ASAP1Q9ULH1 1129 aa13.05□□□□□ -0.32
MSL1-208ENST00000581246 F6X3S4 739 aa13.04□□□□□ -0.32
MSL1-208ENST00000581246 IGHDP01880 384 aa13.04□□□□□ -0.32
MSL1-208ENST00000581246 ANXA1P04083 346 aa13.04□□□□□ -0.32
MSL1-208ENST00000581246 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
MSL1-208ENST00000581246 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
MSL1-208ENST00000581246 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
MSL1-208ENST00000581246 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
MSL1-208ENST00000581246 FKBP5Q13451 457 aaPredicted RBP13.02□□□□□ -0.33
MSL1-208ENST00000581246 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
MSL1-208ENST00000581246 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
MSL1-208ENST00000581246 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
MSL1-208ENST00000581246 ADCY9O60503 1353 aa13.02□□□□□ -0.33
MSL1-208ENST00000581246 TJP1Q07157 1748 aa13.02□□□□□ -0.33
MSL1-208ENST00000581246 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
MSL1-208ENST00000581246 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
MSL1-208ENST00000581246 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
MSL1-208ENST00000581246 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
MSL1-208ENST00000581246 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
MSL1-208ENST00000581246 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
MSL1-208ENST00000581246 CHMP4BQ9H444 224 aaKnown RBP13.01□□□□□ -0.33
MSL1-208ENST00000581246 ERBB4Q15303 1308 aa13.01□□□□□ -0.33
MSL1-208ENST00000581246 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
MSL1-208ENST00000581246 BRWD3Q6RI45 1802 aa13.01□□□□□ -0.33
MSL1-208ENST00000581246 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
MSL1-208ENST00000581246 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
MSL1-208ENST00000581246 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
MSL1-208ENST00000581246 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
MSL1-208ENST00000581246 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
MSL1-208ENST00000581246 KCNQ2O43526 872 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 SLC4A10Q6U841 1118 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 MEIS3Q99687 375 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
MSL1-208ENST00000581246 ARFGEF2Q9Y6D5 1785 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
MSL1-208ENST00000581246 BTAF1O14981 1849 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 IBTKQ9P2D0 1353 aaPredicted RBP12.97□□□□□ -0.33
MSL1-208ENST00000581246 RREB1Q92766 1687 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 A1BGP04217 495 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 COPS6Q7L5N1 327 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 XAGE3Q8WTP9 111 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 USP44Q9H0E7 712 aa12.97□□□□□ -0.33
MSL1-208ENST00000581246 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
MSL1-208ENST00000581246 MYL6BP14649 208 aa12.96□□□□□ -0.33
MSL1-208ENST00000581246 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms