RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 FMNL2Q96PY5 1086 aa22.54■■□□□ 1.2
CDC42EP4-206ENST00000581014 NEFMP07197 916 aa22.53■■□□□ 1.2
CDC42EP4-206ENST00000581014 MCM10Q7L590 875 aa22.53■■□□□ 1.2
CDC42EP4-206ENST00000581014 SRP68Q9UHB9 627 aaKnown RBP22.53■■□□□ 1.2
CDC42EP4-206ENST00000581014 TGFB2P61812 414 aa22.52■■□□□ 1.2
CDC42EP4-206ENST00000581014 FKBP8Q14318 412 aa22.52■■□□□ 1.2
CDC42EP4-206ENST00000581014 NARFQ9UHQ1 456 aa22.52■■□□□ 1.2
CDC42EP4-206ENST00000581014 PARP3Q9Y6F1 533 aa22.52■■□□□ 1.2
CDC42EP4-206ENST00000581014 SIPA1L3O60292 1781 aaPredicted RBP22.51■■□□□ 1.19
CDC42EP4-206ENST00000581014 ZPR1O75312 459 aa22.51■■□□□ 1.19
CDC42EP4-206ENST00000581014 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
CDC42EP4-206ENST00000581014 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
CDC42EP4-206ENST00000581014 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
CDC42EP4-206ENST00000581014 KCNQ3O43525 872 aa22.5■■□□□ 1.19
CDC42EP4-206ENST00000581014 TM4SF1P30408 202 aa22.5■■□□□ 1.19
CDC42EP4-206ENST00000581014 COL15A1P39059 1388 aa22.5■■□□□ 1.19
CDC42EP4-206ENST00000581014 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
CDC42EP4-206ENST00000581014 NFE2L2Q16236 605 aa22.49■■□□□ 1.19
CDC42EP4-206ENST00000581014 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
CDC42EP4-206ENST00000581014 A0A087WZG4 1122 aa22.48■■□□□ 1.19
CDC42EP4-206ENST00000581014 DDR1Q08345 913 aa22.48■■□□□ 1.19
CDC42EP4-206ENST00000581014 DCTN1Q14203 1278 aa22.48■■□□□ 1.19
CDC42EP4-206ENST00000581014 USPL1Q5W0Q7 1092 aa22.48■■□□□ 1.19
CDC42EP4-206ENST00000581014 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
CDC42EP4-206ENST00000581014 IL6STP40189 918 aaPredicted RBP22.47■■□□□ 1.19
CDC42EP4-206ENST00000581014 POLRMTO00411 1230 aaKnown RBP22.46■■□□□ 1.19
CDC42EP4-206ENST00000581014 BCL2L12Q9HB09 334 aa22.46■■□□□ 1.19
CDC42EP4-206ENST00000581014 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
CDC42EP4-206ENST00000581014 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
CDC42EP4-206ENST00000581014 WWC3Q9ULE0 1092 aa22.45■■□□□ 1.18
CDC42EP4-206ENST00000581014 PNISRQ8TF01 805 aaKnown RBP22.44■■□□□ 1.18
CDC42EP4-206ENST00000581014 MAPK8IP3Q9UPT6 1336 aa22.44■■□□□ 1.18
CDC42EP4-206ENST00000581014 NFIXQ14938 502 aa22.43■■□□□ 1.18
CDC42EP4-206ENST00000581014 PRKRIP1Q9H875 184 aaPredicted RBP22.43■■□□□ 1.18
CDC42EP4-206ENST00000581014 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
CDC42EP4-206ENST00000581014 A1BGP04217 495 aa22.42■■□□□ 1.18
CDC42EP4-206ENST00000581014 A0A0G2JLW4 131 aa22.41■■□□□ 1.18
CDC42EP4-206ENST00000581014 DPEP1P16444 411 aa22.4■■□□□ 1.18
CDC42EP4-206ENST00000581014 KCNA3P22001 575 aa22.4■■□□□ 1.18
CDC42EP4-206ENST00000581014 ARFGEF1Q9Y6D6 1849 aa22.4■■□□□ 1.18
CDC42EP4-206ENST00000581014 AFDNP55196 1824 aaKnown RBP22.39■■□□□ 1.17
CDC42EP4-206ENST00000581014 ATP10DQ9P241 1426 aa22.39■■□□□ 1.17
CDC42EP4-206ENST00000581014 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
CDC42EP4-206ENST00000581014 RGL2O15211 777 aa22.37■■□□□ 1.17
CDC42EP4-206ENST00000581014 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
CDC42EP4-206ENST00000581014 TMPOP42166 694 aaKnown RBP22.37■■□□□ 1.17
CDC42EP4-206ENST00000581014 RIPK4P57078 832 aa22.37■■□□□ 1.17
CDC42EP4-206ENST00000581014 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
CDC42EP4-206ENST00000581014 MIS18AQ9NYP9 233 aa22.37■■□□□ 1.17
CDC42EP4-206ENST00000581014 CAMTA2O94983 1202 aa22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 SERPINB2P05120 415 aa22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 EIF4A1P60842 406 aaKnown RBP22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 THUMPD2Q9BTF0 503 aaKnown RBP22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 BABAM1Q9NWV8 329 aa22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 ADCY9O60503 1353 aa22.36■■□□□ 1.17
CDC42EP4-206ENST00000581014 C1QTNF8P60827 252 aa22.35■■□□□ 1.17
CDC42EP4-206ENST00000581014 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
CDC42EP4-206ENST00000581014 PIM2Q9P1W9 311 aa22.35■■□□□ 1.17
CDC42EP4-206ENST00000581014 NBPF26B4DH59 902 aa22.34■■□□□ 1.17
CDC42EP4-206ENST00000581014 WDR43Q15061 677 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDC42EP4-206ENST00000581014 NBPF10Q6P3W6 841 aaKnown RBP22.34■■□□□ 1.17
CDC42EP4-206ENST00000581014 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
CDC42EP4-206ENST00000581014 NBPF15Q8N660 670 aa22.34■■□□□ 1.17
CDC42EP4-206ENST00000581014 TBC1D9BQ66K14 1250 aa22.33■■□□□ 1.17
CDC42EP4-206ENST00000581014 DZIP3Q86Y13 1208 aaKnown RBP22.33■■□□□ 1.17
CDC42EP4-206ENST00000581014 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
CDC42EP4-206ENST00000581014 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
CDC42EP4-206ENST00000581014 BCS1LQ9Y276 419 aa22.33■■□□□ 1.17
CDC42EP4-206ENST00000581014 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
CDC42EP4-206ENST00000581014 SCN7AQ01118 1682 aa22.33■■□□□ 1.16
CDC42EP4-206ENST00000581014 NRXN2Q9P2S2 1712 aa22.31■■□□□ 1.16
CDC42EP4-206ENST00000581014 DLEC1Q9Y238 1755 aa22.31■■□□□ 1.16
CDC42EP4-206ENST00000581014 DALRD3Q5D0E6 543 aaKnown RBP22.31■■□□□ 1.16
CDC42EP4-206ENST00000581014 CARMIL3Q8ND23 1372 aa22.3■■□□□ 1.16
CDC42EP4-206ENST00000581014 DLG5Q8TDM6 1919 aa22.3■■□□□ 1.16
CDC42EP4-206ENST00000581014 SENP3-EIF4A1A0A087X0R7 540 aa22.3■■□□□ 1.16
CDC42EP4-206ENST00000581014 CHRNA5P30532 468 aa22.3■■□□□ 1.16
CDC42EP4-206ENST00000581014 PIP4K2AP48426 406 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP4-206ENST00000581014 BICDL1Q6ZP65 573 aa22.29■■□□□ 1.16
CDC42EP4-206ENST00000581014 SETDB2Q96T68 719 aa22.29■■□□□ 1.16
CDC42EP4-206ENST00000581014 PDZRN3Q9UPQ7 1066 aa22.29■■□□□ 1.16
CDC42EP4-206ENST00000581014 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
CDC42EP4-206ENST00000581014 BRIP1Q9BX63 1249 aa22.28■■□□□ 1.16
CDC42EP4-206ENST00000581014 TSPYL4Q9UJ04 414 aa22.28■■□□□ 1.16
CDC42EP4-206ENST00000581014 ZNF652Q9Y2D9 606 aa22.28■■□□□ 1.16
CDC42EP4-206ENST00000581014 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
CDC42EP4-206ENST00000581014 PRR5LQ6MZQ0 368 aa22.27■■□□□ 1.16
CDC42EP4-206ENST00000581014 ZNF526Q8TF50 670 aaPredicted RBP22.27■■□□□ 1.16
CDC42EP4-206ENST00000581014 TRIM35Q9UPQ4 493 aa22.27■■□□□ 1.16
CDC42EP4-206ENST00000581014 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
CDC42EP4-206ENST00000581014 BCORQ6W2J9 1755 aa22.26■■□□□ 1.15
CDC42EP4-206ENST00000581014 GPBP1L1Q9HC44 474 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP4-206ENST00000581014 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
CDC42EP4-206ENST00000581014 CHL1O00533 1208 aa22.25■■□□□ 1.15
CDC42EP4-206ENST00000581014 ARHGAP27Q6ZUM4 889 aa22.25■■□□□ 1.15
CDC42EP4-206ENST00000581014 SBF1O95248 1867 aa22.24■■□□□ 1.15
CDC42EP4-206ENST00000581014 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
CDC42EP4-206ENST00000581014 H0YIN7 160 aa22.24■■□□□ 1.15
CDC42EP4-206ENST00000581014 PDE6BP35913 854 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms