RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 NDUFB9Q9Y6M9 179 aa8□□□□□ -1.13
SMG8-205ENST00000580798 DCDC2BA2VCK2 349 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 MAPTP10636 758 aaKnown RBP7.99□□□□□ -1.13
SMG8-205ENST00000580798 CD33P20138 364 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 TNP2Q05952 138 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 RSPO4Q2I0M5 234 aaPredicted RBP7.99□□□□□ -1.13
SMG8-205ENST00000580798 FOXD4L6Q3SYB3 417 aaPredicted RBP7.99□□□□□ -1.13
SMG8-205ENST00000580798 FAM182BQ5T319 152 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 FOXD4L3Q6VB84 417 aaPredicted RBP7.99□□□□□ -1.13
SMG8-205ENST00000580798 KRTAP1-3Q8IUG1 177 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 MTMR14Q8NCE2 650 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 C1orf216Q8TAB5 229 aa7.99□□□□□ -1.13
SMG8-205ENST00000580798 AVENQ9NQS1 362 aaPredicted RBP7.99□□□□□ -1.13
SMG8-205ENST00000580798 SOCS7O14512 581 aa7.98□□□□□ -1.13
SMG8-205ENST00000580798 SPATA31C1P0DKV0 1188 aa7.98□□□□□ -1.13
SMG8-205ENST00000580798 USP4Q13107 963 aa7.98□□□□□ -1.13
SMG8-205ENST00000580798 PHTF2Q8N3S3 785 aa7.97□□□□□ -1.13
SMG8-205ENST00000580798 BANK1Q8NDB2 785 aa7.97□□□□□ -1.13
SMG8-205ENST00000580798 AIDAQ96BJ3 306 aa7.97□□□□□ -1.13
SMG8-205ENST00000580798 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
SMG8-205ENST00000580798 A0A1W2PNR3 127 aa7.96□□□□□ -1.14
SMG8-205ENST00000580798 KHNYNO15037 678 aaKnown RBP7.96□□□□□ -1.14
SMG8-205ENST00000580798 SCNN1DP51172 638 aa7.96□□□□□ -1.14
SMG8-205ENST00000580798 PCBP4P57723 403 aaKnown RBP7.96□□□□□ -1.14
SMG8-205ENST00000580798 NKAPLQ5M9Q1 402 aa7.96□□□□□ -1.14
SMG8-205ENST00000580798 NIFKQ9BYG3 293 aaKnown RBP7.96□□□□□ -1.14
SMG8-205ENST00000580798 ZNF468Q5VIY5 522 aaPredicted RBP7.95□□□□□ -1.14
SMG8-205ENST00000580798 SCO2A0A1W2PP80 73 aa7.94□□□□□ -1.14
SMG8-205ENST00000580798 INHAP05111 366 aa7.94□□□□□ -1.14
SMG8-205ENST00000580798 ARSJQ5FYB0 599 aaPredicted RBP7.94□□□□□ -1.14
SMG8-205ENST00000580798 ZNF295-AS1Q8N0V1 137 aa7.94□□□□□ -1.14
SMG8-205ENST00000580798 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
SMG8-205ENST00000580798 GDF10P55107 478 aa7.93□□□□□ -1.14
SMG8-205ENST00000580798 OXLD1Q5BKU9 147 aa7.93□□□□□ -1.14
SMG8-205ENST00000580798 SNRKQ9NRH2 765 aa7.93□□□□□ -1.14
SMG8-205ENST00000580798 PRR12Q9ULL5 1215 aa7.93□□□□□ -1.14
SMG8-205ENST00000580798 FAM157BP0CG42 384 aa7.92□□□□□ -1.14
SMG8-205ENST00000580798 SMTNP53814 917 aa7.92□□□□□ -1.14
SMG8-205ENST00000580798 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
SMG8-205ENST00000580798 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
SMG8-205ENST00000580798 DYRK3O43781 588 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 NBPF1Q3BBV0 1214 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 SLFNL1Q499Z3 407 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 ZIC5Q96T25 663 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 KRTAP4-12Q9BQ66 201 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 CHIC2Q9UKJ5 165 aa7.91□□□□□ -1.14
SMG8-205ENST00000580798 ELOA3CA0A087WX78 387 aaPredicted RBP7.9□□□□□ -1.14
SMG8-205ENST00000580798 ELOA3DA6NLF2 546 aaPredicted RBP7.9□□□□□ -1.14
SMG8-205ENST00000580798 ELOA3BQ3SY89 546 aa7.9□□□□□ -1.14
SMG8-205ENST00000580798 LCE3BQ5TA77 95 aa7.9□□□□□ -1.14
SMG8-205ENST00000580798 ELOA3Q8NG57 546 aa7.9□□□□□ -1.14
SMG8-205ENST00000580798 MDFIQ99750 246 aa7.9□□□□□ -1.14
SMG8-205ENST00000580798 MARK1Q9P0L2 795 aa7.9□□□□□ -1.14
SMG8-205ENST00000580798 SPDYE3A6NKU9 549 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 APBB1O00213 710 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 EFSO43281 561 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
SMG8-205ENST00000580798 NEUROD2Q15784 382 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 PRRT3Q5FWE3 981 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 SAMD5Q5TGI4 173 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 ZFP64Q9NPA5 681 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 ZDHHC3Q9NYG2 299 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 IQSEC3Q9UPP2 1182 aaPredicted RBP7.89□□□□□ -1.15
SMG8-205ENST00000580798 USP3Q9Y6I4 520 aa7.89□□□□□ -1.15
SMG8-205ENST00000580798 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
SMG8-205ENST00000580798 APBA3O96018 575 aa7.88□□□□□ -1.15
SMG8-205ENST00000580798 EIF4G2P78344 907 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMG8-205ENST00000580798 SYT9Q86SS6 491 aa7.88□□□□□ -1.15
SMG8-205ENST00000580798 SERTAD1Q9UHV2 236 aa7.88□□□□□ -1.15
SMG8-205ENST00000580798 GJA3Q9Y6H8 435 aa7.88□□□□□ -1.15
SMG8-205ENST00000580798 ALAS2P22557 587 aa7.87□□□□□ -1.15
SMG8-205ENST00000580798 LAMC2Q13753 1193 aa7.87□□□□□ -1.15
SMG8-205ENST00000580798 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
SMG8-205ENST00000580798 MTFR1Q15390 333 aa7.87□□□□□ -1.15
SMG8-205ENST00000580798 PRSS36Q5K4E3 855 aa7.87□□□□□ -1.15
SMG8-205ENST00000580798 TBC1D2BQ9UPU7 963 aa7.87□□□□□ -1.15
SMG8-205ENST00000580798 A6NJY4 79 aa7.86□□□□□ -1.15
SMG8-205ENST00000580798 TMEM229AB2RXF0 380 aa7.86□□□□□ -1.15
SMG8-205ENST00000580798 CDK2AP1O14519 115 aa7.86□□□□□ -1.15
SMG8-205ENST00000580798 SLC4A9Q96Q91 983 aa7.86□□□□□ -1.15
SMG8-205ENST00000580798 CABP1Q9NZU7 370 aa7.86□□□□□ -1.15
SMG8-205ENST00000580798 M0R082 166 aa7.85□□□□□ -1.15
SMG8-205ENST00000580798 ZNF417Q8TAU3 575 aa7.85□□□□□ -1.15
SMG8-205ENST00000580798 ZNF587Q96SQ5 575 aaPredicted RBP7.85□□□□□ -1.15
SMG8-205ENST00000580798 PARP3Q9Y6F1 533 aa7.85□□□□□ -1.15
SMG8-205ENST00000580798 ADARB2-AS1A8MUL3 147 aa7.84□□□□□ -1.15
SMG8-205ENST00000580798 SIN3BO75182 1162 aa7.84□□□□□ -1.15
SMG8-205ENST00000580798 IRF5Q13568 498 aa7.84□□□□□ -1.15
SMG8-205ENST00000580798 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
SMG8-205ENST00000580798 ALBP02768 609 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 TXLNAP40222 546 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 BRPF1P55201 1214 aaPredicted RBP7.83□□□□□ -1.16
SMG8-205ENST00000580798 GRIK4Q16099 956 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 PRDM6Q9NQX0 595 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 STARD13Q9Y3M8 1113 aa7.83□□□□□ -1.16
SMG8-205ENST00000580798 TRIM28Q13263 835 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms