RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
RFFL-207ENST00000580569 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
RFFL-207ENST00000580569 GPBP1L1Q9HC44 474 aaPredicted RBP10.23□□□□□ -0.77
RFFL-207ENST00000580569 EMILIN1Q9Y6C2 1016 aa10.23□□□□□ -0.77
RFFL-207ENST00000580569 TTC21AQ8NDW8 1320 aa10.23□□□□□ -0.77
RFFL-207ENST00000580569 IL16Q14005 1332 aa10.22□□□□□ -0.77
RFFL-207ENST00000580569 NFAT5O94916 1531 aa10.22□□□□□ -0.77
RFFL-207ENST00000580569 U2SURPO15042 1029 aaKnown RBP10.21□□□□□ -0.77
RFFL-207ENST00000580569 BCAR3O75815 825 aa10.21□□□□□ -0.77
RFFL-207ENST00000580569 KCNH5Q8NCM2 988 aa10.21□□□□□ -0.77
RFFL-207ENST00000580569 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
RFFL-207ENST00000580569 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.78
RFFL-207ENST00000580569 SOX12O15370 315 aa10.2□□□□□ -0.78
RFFL-207ENST00000580569 GRIN3BO60391 1043 aa10.2□□□□□ -0.78
RFFL-207ENST00000580569 ZNF827Q17R98 1081 aa10.2□□□□□ -0.78
RFFL-207ENST00000580569 PODXL2Q9NZ53 605 aa10.2□□□□□ -0.78
RFFL-207ENST00000580569 RBM19Q9Y4C8 960 aaKnown RBP10.2□□□□□ -0.78
RFFL-207ENST00000580569 RGPD2P0DJD1 1756 aa10.19□□□□□ -0.78
RFFL-207ENST00000580569 ZBTB7CA1YPR0 619 aa10.19□□□□□ -0.78
RFFL-207ENST00000580569 POLD1P28340 1107 aa10.19□□□□□ -0.78
RFFL-207ENST00000580569 RARSP54136 660 aaKnown RBP10.19□□□□□ -0.78
RFFL-207ENST00000580569 RRS1Q15050 365 aaKnown RBP10.19□□□□□ -0.78
RFFL-207ENST00000580569 SLC27A3Q5K4L6 730 aa10.19□□□□□ -0.78
RFFL-207ENST00000580569 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.19□□□□□ -0.78
RFFL-207ENST00000580569 AK7Q96M32 723 aa10.19□□□□□ -0.78
RFFL-207ENST00000580569 LRRC4BQ9NT99 713 aa10.19□□□□□ -0.78
RFFL-207ENST00000580569 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 KDM2BQ8NHM5 1336 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 CT47B1P0C2W7 299 aaPredicted RBP10.18□□□□□ -0.78
RFFL-207ENST00000580569 HSPA6P17066 643 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 PRKAR2BP31323 418 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 PDE3AQ14432 1141 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 MFSD10Q14728 455 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 IFNL1Q8IU54 200 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
RFFL-207ENST00000580569 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
RFFL-207ENST00000580569 FAM208AQ9UK61 1670 aaKnown RBP10.18□□□□□ -0.78
RFFL-207ENST00000580569 ATP10DQ9P241 1426 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 ADCY9O60503 1353 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 MAPK8IP3Q9UPT6 1336 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 PDE4AP27815 886 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 RIPK4P57078 832 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 NFE2L2Q16236 605 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 IL27Q8NEV9 243 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 NLGN2Q8NFZ4 835 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 ACSBG1Q96GR2 724 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 MYH16Q9H6N6 1097 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
RFFL-207ENST00000580569 CACNA1FO60840 1977 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 TAF1LQ8IZX4 1826 aa10.17□□□□□ -0.78
RFFL-207ENST00000580569 YBX3P16989 372 aaKnown RBP eCLIP10.16□□□□□ -0.78
RFFL-207ENST00000580569 EIF4A2Q14240 407 aaKnown RBP10.16□□□□□ -0.78
RFFL-207ENST00000580569 RBM26Q5T8P6 1007 aaKnown RBP10.16□□□□□ -0.78
RFFL-207ENST00000580569 DOT1LQ8TEK3 1739 aa10.16□□□□□ -0.78
RFFL-207ENST00000580569 KIF24Q5T7B8 1368 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 ERBB3P21860 1342 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 PPM1GO15355 546 aaPredicted RBP10.15□□□□□ -0.78
RFFL-207ENST00000580569 HMOX1P09601 288 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 ZNF853P0CG23 659 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 IL2RBP14784 551 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
RFFL-207ENST00000580569 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 CRISPLD2Q9H0B8 497 aa10.15□□□□□ -0.78
RFFL-207ENST00000580569 MAP3K19Q56UN5 1328 aa10.14□□□□□ -0.79
RFFL-207ENST00000580569 GPIHBP1Q8IV16 184 aa10.14□□□□□ -0.79
RFFL-207ENST00000580569 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
RFFL-207ENST00000580569 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
RFFL-207ENST00000580569 KDRP35968 1356 aa10.14□□□□□ -0.79
RFFL-207ENST00000580569 C5P01031 1676 aa10.13□□□□□ -0.79
RFFL-207ENST00000580569 PCNTO95613 3336 aa10.13□□□□□ -0.79
RFFL-207ENST00000580569 MLLT3P42568 568 aaPredicted RBP10.13□□□□□ -0.79
RFFL-207ENST00000580569 EXOSC9Q06265 439 aaKnown RBP10.13□□□□□ -0.79
RFFL-207ENST00000580569 HSP90AB2PQ58FF8 381 aa10.13□□□□□ -0.79
RFFL-207ENST00000580569 TSR2Q969E8 191 aaKnown RBP10.13□□□□□ -0.79
RFFL-207ENST00000580569 FLT4P35916 1363 aa10.13□□□□□ -0.79
RFFL-207ENST00000580569 AEBP1Q8IUX7 1158 aa10.12□□□□□ -0.79
RFFL-207ENST00000580569 TFCP2L1Q9NZI6 479 aa10.12□□□□□ -0.79
RFFL-207ENST00000580569 TNNQ9UQP3 1299 aa10.12□□□□□ -0.79
RFFL-207ENST00000580569 RLBP1P12271 317 aa10.11□□□□□ -0.79
RFFL-207ENST00000580569 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
RFFL-207ENST00000580569 PANK1Q8TE04 598 aa10.11□□□□□ -0.79
RFFL-207ENST00000580569 MS4A4AQ96JQ5 239 aa10.11□□□□□ -0.79
RFFL-207ENST00000580569 CD2APQ9Y5K6 639 aa10.11□□□□□ -0.79
RFFL-207ENST00000580569 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 MAP3K13O43283 966 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 AAMPQ13685 434 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 ALDH1L2Q3SY69 923 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 SULT6B1Q6IMI4 303 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
RFFL-207ENST00000580569 SSH1Q8WYL5 1049 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 IFT57Q9NWB7 429 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 NLRP2Q9NX02 1062 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 UBR3Q6ZT12 1888 aa10.1□□□□□ -0.79
RFFL-207ENST00000580569 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
RFFL-207ENST00000580569 TCERG1O14776 1098 aaKnown RBP10.09□□□□□ -0.79
RFFL-207ENST00000580569 NEFMP07197 916 aa10.09□□□□□ -0.79
RFFL-207ENST00000580569 MS4A1P11836 297 aa10.09□□□□□ -0.79
RFFL-207ENST00000580569 ZNF428Q96B54 188 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms