RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.69
SMARCE1-216ENST00000580419 A0A087WZG4 1122 aa19.38■□□□□ 0.69
SMARCE1-216ENST00000580419 PRKAR2BP31323 418 aa19.38■□□□□ 0.69
SMARCE1-216ENST00000580419 EIF5P55010 431 aaKnown RBP19.38■□□□□ 0.69
SMARCE1-216ENST00000580419 C1QTNF8P60827 252 aa19.38■□□□□ 0.69
SMARCE1-216ENST00000580419 POLRMTO00411 1230 aaKnown RBP19.37■□□□□ 0.69
SMARCE1-216ENST00000580419 PHACTR3Q96KR7 559 aa19.37■□□□□ 0.69
SMARCE1-216ENST00000580419 SRP68Q9UHB9 627 aaKnown RBP19.37■□□□□ 0.69
SMARCE1-216ENST00000580419 RGL2O15211 777 aa19.36■□□□□ 0.69
SMARCE1-216ENST00000580419 GIGYF1O75420 1035 aaPredicted RBP19.36■□□□□ 0.69
SMARCE1-216ENST00000580419 DDR1Q08345 913 aa19.36■□□□□ 0.69
SMARCE1-216ENST00000580419 ZNF496Q96IT1 587 aaPredicted RBP19.36■□□□□ 0.69
SMARCE1-216ENST00000580419 FMNL2Q96PY5 1086 aa19.36■□□□□ 0.69
SMARCE1-216ENST00000580419 ZBTB1Q9Y2K1 713 aa19.36■□□□□ 0.69
SMARCE1-216ENST00000580419 ATP10DQ9P241 1426 aa19.35■□□□□ 0.69
SMARCE1-216ENST00000580419 AFDNP55196 1824 aaKnown RBP19.35■□□□□ 0.69
SMARCE1-216ENST00000580419 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
SMARCE1-216ENST00000580419 KCNA3P22001 575 aa19.35■□□□□ 0.69
SMARCE1-216ENST00000580419 IL6STP40189 918 aaPredicted RBP19.35■□□□□ 0.69
SMARCE1-216ENST00000580419 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
SMARCE1-216ENST00000580419 USPL1Q5W0Q7 1092 aa19.34■□□□□ 0.69
SMARCE1-216ENST00000580419 PIM2Q9P1W9 311 aa19.34■□□□□ 0.69
SMARCE1-216ENST00000580419 A0A0G2JLW4 131 aa19.33■□□□□ 0.68
SMARCE1-216ENST00000580419 DPEP1P16444 411 aa19.33■□□□□ 0.68
SMARCE1-216ENST00000580419 RTF1Q92541 710 aaKnown RBP19.33■□□□□ 0.68
SMARCE1-216ENST00000580419 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.68
SMARCE1-216ENST00000580419 PNNQ9H307 717 aaKnown RBP19.32■□□□□ 0.68
SMARCE1-216ENST00000580419 BCL2L12Q9HB09 334 aa19.32■□□□□ 0.68
SMARCE1-216ENST00000580419 DLEC1Q9Y238 1755 aa19.32■□□□□ 0.68
SMARCE1-216ENST00000580419 SCN7AQ01118 1682 aa19.31■□□□□ 0.68
SMARCE1-216ENST00000580419 BTBD11A6QL63 1104 aa19.31■□□□□ 0.68
SMARCE1-216ENST00000580419 NFIXQ14938 502 aa19.31■□□□□ 0.68
SMARCE1-216ENST00000580419 CEP350Q5VT06 3117 aa19.3■□□□□ 0.68
SMARCE1-216ENST00000580419 GPBP1L1Q9HC44 474 aaPredicted RBP19.3■□□□□ 0.68
SMARCE1-216ENST00000580419 BCS1LQ9Y276 419 aa19.3■□□□□ 0.68
SMARCE1-216ENST00000580419 NEFMP07197 916 aa19.29■□□□□ 0.68
SMARCE1-216ENST00000580419 DALRD3Q5D0E6 543 aaKnown RBP19.29■□□□□ 0.68
SMARCE1-216ENST00000580419 DLG5Q8TDM6 1919 aa19.28■□□□□ 0.68
SMARCE1-216ENST00000580419 SNRPA1P09661 255 aaKnown RBP19.28■□□□□ 0.68
SMARCE1-216ENST00000580419 RALBP1Q15311 655 aa19.28■□□□□ 0.68
SMARCE1-216ENST00000580419 SBF1O95248 1867 aa19.27■□□□□ 0.68
SMARCE1-216ENST00000580419 SERPINB2P05120 415 aa19.27■□□□□ 0.68
SMARCE1-216ENST00000580419 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
SMARCE1-216ENST00000580419 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
SMARCE1-216ENST00000580419 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
SMARCE1-216ENST00000580419 CLEC4GQ6UXB4 293 aa19.27■□□□□ 0.68
SMARCE1-216ENST00000580419 ZC3H4Q9UPT8 1303 aaKnown RBP19.26■□□□□ 0.67
SMARCE1-216ENST00000580419 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
SMARCE1-216ENST00000580419 PLEKHF1Q96S99 279 aa19.26■□□□□ 0.67
SMARCE1-216ENST00000580419 BCORQ6W2J9 1755 aa19.26■□□□□ 0.67
SMARCE1-216ENST00000580419 CARMIL3Q8ND23 1372 aa19.25■□□□□ 0.67
SMARCE1-216ENST00000580419 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
SMARCE1-216ENST00000580419 ARHGAP27Q6ZUM4 889 aa19.24■□□□□ 0.67
SMARCE1-216ENST00000580419 MCM10Q7L590 875 aa19.23■□□□□ 0.67
SMARCE1-216ENST00000580419 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
SMARCE1-216ENST00000580419 KDM3BQ7LBC6 1761 aa19.22■□□□□ 0.67
SMARCE1-216ENST00000580419 CAMTA2O94983 1202 aa19.22■□□□□ 0.67
SMARCE1-216ENST00000580419 A1BGP04217 495 aa19.22■□□□□ 0.67
SMARCE1-216ENST00000580419 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
SMARCE1-216ENST00000580419 LAMB4A4D0S4 1761 aa19.21■□□□□ 0.67
SMARCE1-216ENST00000580419 KCNQ3O43525 872 aa19.21■□□□□ 0.67
SMARCE1-216ENST00000580419 PDE6BP35913 854 aa19.21■□□□□ 0.67
SMARCE1-216ENST00000580419 NFE2L2Q16236 605 aa19.21■□□□□ 0.67
SMARCE1-216ENST00000580419 ANKRD31Q8N7Z5 1873 aa19.21■□□□□ 0.67
SMARCE1-216ENST00000580419 H0YIN7 160 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 CHRNA5P30532 468 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 SETDB2Q96T68 719 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 WWC3Q9ULE0 1092 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 ZNF652Q9Y2D9 606 aa19.2■□□□□ 0.66
SMARCE1-216ENST00000580419 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
SMARCE1-216ENST00000580419 KIF3CO14782 793 aa19.19■□□□□ 0.66
SMARCE1-216ENST00000580419 DZIP3Q86Y13 1208 aaKnown RBP19.19■□□□□ 0.66
SMARCE1-216ENST00000580419 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
SMARCE1-216ENST00000580419 PRR5LQ6MZQ0 368 aa19.18■□□□□ 0.66
SMARCE1-216ENST00000580419 C9orf131Q5VYM1 1079 aa19.17■□□□□ 0.66
SMARCE1-216ENST00000580419 ARFGEF2Q9Y6D5 1785 aa19.16■□□□□ 0.66
SMARCE1-216ENST00000580419 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
SMARCE1-216ENST00000580419 C2CD5Q86YS7 1000 aa19.16■□□□□ 0.66
SMARCE1-216ENST00000580419 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
SMARCE1-216ENST00000580419 ERBB4Q15303 1308 aa19.16■□□□□ 0.66
SMARCE1-216ENST00000580419 MAPK8IP3Q9UPT6 1336 aa19.16■□□□□ 0.66
SMARCE1-216ENST00000580419 KLRG2A4D1S0 409 aaPredicted RBP19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 NBPF26B4DH59 902 aa19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 TOMM70O94826 608 aa19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 NBPF15Q8N660 670 aa19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 CNBD1Q8NA66 436 aa19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 KDM2BQ8NHM5 1336 aa19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 FER1L6Q2WGJ9 1857 aa19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 DICER1Q9UPY3 1922 aaKnown RBP19.15■□□□□ 0.66
SMARCE1-216ENST00000580419 ERVV-1B6SEH8 477 aa19.14■□□□□ 0.65
SMARCE1-216ENST00000580419 HSPA6P17066 643 aa19.14■□□□□ 0.65
SMARCE1-216ENST00000580419 LMNB1P20700 586 aa19.14■□□□□ 0.65
SMARCE1-216ENST00000580419 STYK1Q6J9G0 422 aa19.14■□□□□ 0.65
SMARCE1-216ENST00000580419 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
SMARCE1-216ENST00000580419 TNRC6CQ9HCJ0 1690 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms