RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SNRPA1P09661 255 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-218ENST00000580391 PDIA6Q15084 440 aa18.64■□□□□ 0.57
CDK5RAP3-218ENST00000580391 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
CDK5RAP3-218ENST00000580391 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDK5RAP3-218ENST00000580391 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
CDK5RAP3-218ENST00000580391 ANKRD44Q8N8A2 993 aa18.62■□□□□ 0.57
CDK5RAP3-218ENST00000580391 DNAAF4Q8WXU2 420 aa18.62■□□□□ 0.57
CDK5RAP3-218ENST00000580391 BACH2Q9BYV9 841 aa18.62■□□□□ 0.57
CDK5RAP3-218ENST00000580391 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
CDK5RAP3-218ENST00000580391 ARFGEF2Q9Y6D5 1785 aa18.62■□□□□ 0.57
CDK5RAP3-218ENST00000580391 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
CDK5RAP3-218ENST00000580391 SPATA31A5Q5VU36 1347 aa18.61■□□□□ 0.57
CDK5RAP3-218ENST00000580391 SPATA31A7Q8IWB4 1347 aa18.61■□□□□ 0.57
CDK5RAP3-218ENST00000580391 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
CDK5RAP3-218ENST00000580391 MYL6BP14649 208 aa18.6■□□□□ 0.57
CDK5RAP3-218ENST00000580391 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-218ENST00000580391 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
CDK5RAP3-218ENST00000580391 SRCIN1Q9C0H9 1055 aa18.6■□□□□ 0.57
CDK5RAP3-218ENST00000580391 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-218ENST00000580391 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 EXOC5O00471 708 aa18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 NUCB1Q02818 461 aa18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 BEND3Q5T5X7 828 aa18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 MAP3K2Q9Y2U5 619 aa18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
CDK5RAP3-218ENST00000580391 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 GNAI2P04899 355 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 GNAI3P08754 354 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 C8orf34Q49A92 452 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 KSR2Q6VAB6 950 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 LRP10Q7Z4F1 713 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 LNPKQ9C0E8 428 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 USP44Q9H0E7 712 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 CCDC9Q9Y3X0 531 aaKnown RBP18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.56
CDK5RAP3-218ENST00000580391 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
CDK5RAP3-218ENST00000580391 PIGBQ92521 554 aa18.57■□□□□ 0.56
CDK5RAP3-218ENST00000580391 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
CDK5RAP3-218ENST00000580391 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
CDK5RAP3-218ENST00000580391 BCL9O00512 1426 aa18.56■□□□□ 0.56
CDK5RAP3-218ENST00000580391 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
CDK5RAP3-218ENST00000580391 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
CDK5RAP3-218ENST00000580391 UBTFL1P0CB47 393 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 DDB1Q16531 1140 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 ANKRD45Q5TZF3 282 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 UNC5CLQ8IV45 518 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 DCTPP1Q9H773 170 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 SPATA31A6Q5VVP1 1343 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 DDX58O95786 925 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NGLY1Q96IV0 654 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 ASAP1Q9ULH1 1129 aa18.55■□□□□ 0.56
CDK5RAP3-218ENST00000580391 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
CDK5RAP3-218ENST00000580391 TJP1Q07157 1748 aa18.54■□□□□ 0.56
CDK5RAP3-218ENST00000580391 MYT1Q01538 1121 aa18.53■□□□□ 0.56
CDK5RAP3-218ENST00000580391 BARGINQ6ZT62 677 aa18.53■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP3-218ENST00000580391 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP3-218ENST00000580391 ATG3Q9NT62 314 aa18.53■□□□□ 0.56
CDK5RAP3-218ENST00000580391 ERBB4Q15303 1308 aa18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NBPF26B4DH59 902 aa18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 HSPA1LP34931 641 aa18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NBPF14Q5TI25 921 aa18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 RIC3Q7Z5B4 369 aa18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 NBPF15Q8N660 670 aa18.52■□□□□ 0.56
CDK5RAP3-218ENST00000580391 PNMA6EA0A0J9YXQ4 647 aa18.51■□□□□ 0.55
CDK5RAP3-218ENST00000580391 HMMRO75330 724 aa18.51■□□□□ 0.55
CDK5RAP3-218ENST00000580391 ALDH1L1O75891 902 aa18.51■□□□□ 0.55
CDK5RAP3-218ENST00000580391 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
CDK5RAP3-218ENST00000580391 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
CDK5RAP3-218ENST00000580391 A1BGP04217 495 aa18.5■□□□□ 0.55
CDK5RAP3-218ENST00000580391 VPS72Q15906 364 aa18.5■□□□□ 0.55
CDK5RAP3-218ENST00000580391 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-218ENST00000580391 LINS1Q8NG48 757 aa18.5■□□□□ 0.55
CDK5RAP3-218ENST00000580391 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
CDK5RAP3-218ENST00000580391 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP3-218ENST00000580391 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
CDK5RAP3-218ENST00000580391 PRIM1P49642 420 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-218ENST00000580391 ATP8B2P98198 1209 aa18.49■□□□□ 0.55
CDK5RAP3-218ENST00000580391 APBB1O00213 710 aa18.48■□□□□ 0.55
CDK5RAP3-218ENST00000580391 ANKRD13DQ6ZTN6 518 aa18.48■□□□□ 0.55
CDK5RAP3-218ENST00000580391 DNAJC10Q8IXB1 793 aa18.48■□□□□ 0.55
CDK5RAP3-218ENST00000580391 MYD88Q99836 296 aa18.48■□□□□ 0.55
CDK5RAP3-218ENST00000580391 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP3-218ENST00000580391 METTL22Q9BUU2 404 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-218ENST00000580391 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
CDK5RAP3-218ENST00000580391 C9orf78Q9NZ63 289 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP3-218ENST00000580391 USP21Q9UK80 565 aa18.47■□□□□ 0.55
CDK5RAP3-218ENST00000580391 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
CDK5RAP3-218ENST00000580391 A0A0G2JS52 829 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 SMARCA5O60264 1052 aaPredicted RBP18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 TTLL7Q6ZT98 887 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 VSIG10Q8N0Z9 540 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 BCL11AQ9H165 835 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms