RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 DOLKQ9UPQ8 538 aa10.68□□□□□ -0.7
PPP4R1-216ENST00000580283 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
PPP4R1-216ENST00000580283 ARHGAP5Q13017 1502 aa10.68□□□□□ -0.7
PPP4R1-216ENST00000580283 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
PPP4R1-216ENST00000580283 MAN1A2O60476 641 aa10.67□□□□□ -0.7
PPP4R1-216ENST00000580283 MYCP01106 439 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-216ENST00000580283 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-216ENST00000580283 NPATQ14207 1427 aa10.67□□□□□ -0.7
PPP4R1-216ENST00000580283 CLTCQ00610 1675 aaKnown RBP10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 SPINT1O43278 529 aa10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 PIP4K2BP78356 416 aa10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 ZNF395Q9H8N7 513 aaPredicted RBP10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 PLA2R1Q13018 1463 aa10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
PPP4R1-216ENST00000580283 A6NJR5 290 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 POM121CA8CG34 1229 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 PTGIRP43119 386 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 SCTRP47872 440 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 CYP2U1Q7Z449 544 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 ALG2Q9H553 416 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 GTF3C3Q9Y5Q9 886 aa10.65□□□□□ -0.7
PPP4R1-216ENST00000580283 ABCC1P33527 1531 aa10.64□□□□□ -0.71
PPP4R1-216ENST00000580283 TTLL8A6PVC2 850 aa10.64□□□□□ -0.71
PPP4R1-216ENST00000580283 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
PPP4R1-216ENST00000580283 POLMQ9NP87 494 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-216ENST00000580283 CEP170BQ9Y4F5 1589 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-216ENST00000580283 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
PPP4R1-216ENST00000580283 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 PREX2Q70Z35 1606 aa10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 USP4Q13107 963 aa10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 INSM2Q96T92 566 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 RGS17Q9UGC6 210 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 TROQ12816 1431 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 PTPRKQ15262 1439 aa10.63□□□□□ -0.71
PPP4R1-216ENST00000580283 DNMT1P26358 1616 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-216ENST00000580283 NEURL4Q96JN8 1562 aa10.62□□□□□ -0.71
PPP4R1-216ENST00000580283 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
PPP4R1-216ENST00000580283 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
PPP4R1-216ENST00000580283 TSGA10IPQ3SY00 556 aa10.62□□□□□ -0.71
PPP4R1-216ENST00000580283 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
PPP4R1-216ENST00000580283 SAMD9LQ8IVG5 1584 aa10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 FIGNL2A6NMB9 653 aa10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 HDGFL1Q5TGJ6 251 aa10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 FNBP4Q8N3X1 1017 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 STRCP1A6NGW2 1772 aa10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 POLR1AO95602 1720 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-216ENST00000580283 TOM1O60784 492 aa10.6□□□□□ -0.71
PPP4R1-216ENST00000580283 SKIP12755 728 aa10.6□□□□□ -0.71
PPP4R1-216ENST00000580283 CTSOP43234 321 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-216ENST00000580283 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.71
PPP4R1-216ENST00000580283 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-216ENST00000580283 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
PPP4R1-216ENST00000580283 MEN1O00255 615 aa10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 TRAK2O60296 914 aa10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 DNMT3LQ9UJW3 386 aa10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 ARHGAP35Q9NRY4 1499 aa10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 SHANK2Q9UPX8 1470 aa10.59□□□□□ -0.71
PPP4R1-216ENST00000580283 VWDEQ8N2E2 1590 aa10.58□□□□□ -0.72
PPP4R1-216ENST00000580283 ADAMTS19Q8TE59 1207 aa10.58□□□□□ -0.72
PPP4R1-216ENST00000580283 NLRP3Q96P20 1036 aa10.58□□□□□ -0.72
PPP4R1-216ENST00000580283 CPS1P31327 1500 aa10.58□□□□□ -0.72
PPP4R1-216ENST00000580283 PLXNC1O60486 1568 aa10.57□□□□□ -0.72
PPP4R1-216ENST00000580283 A0A1W2PRU2 124 aa10.57□□□□□ -0.72
PPP4R1-216ENST00000580283 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
PPP4R1-216ENST00000580283 GLMNQ92990 594 aa10.57□□□□□ -0.72
PPP4R1-216ENST00000580283 ARHGEF10LQ9HCE6 1279 aa10.57□□□□□ -0.72
PPP4R1-216ENST00000580283 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
PPP4R1-216ENST00000580283 A2ML1A8K2U0 1454 aa10.56□□□□□ -0.72
PPP4R1-216ENST00000580283 GNRH1P01148 92 aa10.56□□□□□ -0.72
PPP4R1-216ENST00000580283 EML3Q32P44 896 aa10.56□□□□□ -0.72
PPP4R1-216ENST00000580283 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-216ENST00000580283 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.724e-6■■■■□ 23.6
PPP4R1-216ENST00000580283 RNF217Q8TC41 542 aa10.55□□□□□ -0.72
PPP4R1-216ENST00000580283 CALR3Q96L12 384 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-216ENST00000580283 TERTO14746 1132 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 LZTS3O60299 673 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 CLIP1P30622 1438 aa10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 CLN3Q13286 438 aa10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 EEA1Q15075 1411 aa10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 GGT6Q6P531 493 aa10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 INO80Q9ULG1 1556 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
PPP4R1-216ENST00000580283 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 ESCO1Q5FWF5 840 aa10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 SLC27A3Q5K4L6 730 aa10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 FOXD4L5Q5VV16 416 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 NOD1Q9Y239 953 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms