RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
SENP3-203ENST00000580231 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
SENP3-203ENST00000580231 TJAP1Q5JTD0 557 aa11.67□□□□□ -0.54
SENP3-203ENST00000580231 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
SENP3-203ENST00000580231 ZNF428Q96B54 188 aa11.67□□□□□ -0.54
SENP3-203ENST00000580231 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
SENP3-203ENST00000580231 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
SENP3-203ENST00000580231 TCERG1O14776 1098 aaKnown RBP11.66□□□□□ -0.54
SENP3-203ENST00000580231 BCAR3O75815 825 aa11.66□□□□□ -0.54
SENP3-203ENST00000580231 FBLN1P23142 703 aa11.66□□□□□ -0.54
SENP3-203ENST00000580231 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
SENP3-203ENST00000580231 MLLT3P42568 568 aaPredicted RBP11.65□□□□□ -0.54
SENP3-203ENST00000580231 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
SENP3-203ENST00000580231 C20orf194Q5TEA3 1177 aa11.65□□□□□ -0.54
SENP3-203ENST00000580231 ILDR2Q71H61 639 aa11.65□□□□□ -0.54
SENP3-203ENST00000580231 PMFBP1Q8TBY8 1022 aa11.65□□□□□ -0.54
SENP3-203ENST00000580231 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.54
SENP3-203ENST00000580231 LRRC7Q96NW7 1537 aa11.65□□□□□ -0.55
SENP3-203ENST00000580231 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
SENP3-203ENST00000580231 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
SENP3-203ENST00000580231 FANCIQ9NVI1 1328 aa11.63□□□□□ -0.55
SENP3-203ENST00000580231 ADGRL3Q9HAR2 1447 aa11.63□□□□□ -0.55
SENP3-203ENST00000580231 GNAI1P63096 354 aa11.63□□□□□ -0.55
SENP3-203ENST00000580231 EIF4A2Q14240 407 aaKnown RBP11.63□□□□□ -0.55
SENP3-203ENST00000580231 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
SENP3-203ENST00000580231 RGPD8O14715 1765 aaPredicted RBP11.63□□□□□ -0.55
SENP3-203ENST00000580231 SBNO1A3KN83 1393 aa11.63□□□□□ -0.55
SENP3-203ENST00000580231 XIRP1Q702N8 1843 aaKnown RBP11.63□□□□□ -0.55
SENP3-203ENST00000580231 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
SENP3-203ENST00000580231 HMOX1P09601 288 aa11.62□□□□□ -0.55
SENP3-203ENST00000580231 EXOSC9Q06265 439 aaKnown RBP11.62□□□□□ -0.55
SENP3-203ENST00000580231 PHACTR3Q96KR7 559 aa11.62□□□□□ -0.55
SENP3-203ENST00000580231 MTRQ99707 1265 aa11.62□□□□□ -0.55
SENP3-203ENST00000580231 IFT57Q9NWB7 429 aa11.62□□□□□ -0.55
SENP3-203ENST00000580231 RNF40O75150 1001 aa11.61□□□□□ -0.55
SENP3-203ENST00000580231 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
SENP3-203ENST00000580231 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
SENP3-203ENST00000580231 ZKSCAN2Q63HK3 967 aa11.61□□□□□ -0.55
SENP3-203ENST00000580231 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
SENP3-203ENST00000580231 FLT4P35916 1363 aa11.61□□□□□ -0.55
SENP3-203ENST00000580231 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
SENP3-203ENST00000580231 NWD1Q149M9 1564 aa11.6□□□□□ -0.55
SENP3-203ENST00000580231 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
SENP3-203ENST00000580231 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
SENP3-203ENST00000580231 APLP1P51693 650 aa11.6□□□□□ -0.55
SENP3-203ENST00000580231 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
SENP3-203ENST00000580231 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
SENP3-203ENST00000580231 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
SENP3-203ENST00000580231 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
SENP3-203ENST00000580231 HSPA1LP34931 641 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 AMPHP49418 695 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 HSP90AB2PQ58FF8 381 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 SULT6B1Q6IMI4 303 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 ABTB2Q8N961 1025 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 EYA1Q99502 592 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 NCOA3Q9Y6Q9 1424 aa11.59□□□□□ -0.55
SENP3-203ENST00000580231 TOM1O60784 492 aa11.58□□□□□ -0.56
SENP3-203ENST00000580231 PSME1Q06323 249 aa11.58□□□□□ -0.56
SENP3-203ENST00000580231 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
SENP3-203ENST00000580231 FRAT1Q92837 279 aaPredicted RBP11.58□□□□□ -0.56
SENP3-203ENST00000580231 TSR2Q969E8 191 aaKnown RBP11.58□□□□□ -0.56
SENP3-203ENST00000580231 CLUAP1Q96AJ1 413 aa11.58□□□□□ -0.56
SENP3-203ENST00000580231 PIK3C2AO00443 1686 aa11.58□□□□□ -0.56
SENP3-203ENST00000580231 MED1Q15648 1581 aaPredicted RBP11.58□□□□□ -0.56
SENP3-203ENST00000580231 KIF16BQ96L93 1317 aa11.58□□□□□ -0.56
SENP3-203ENST00000580231 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
SENP3-203ENST00000580231 SLF2Q8IX21 1173 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 DZIP1LQ8IYY4 767 aaKnown RBP11.57□□□□□ -0.56
SENP3-203ENST00000580231 KCNH5Q8NCM2 988 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 SSH1Q8WYL5 1049 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
SENP3-203ENST00000580231 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
SENP3-203ENST00000580231 RTL1A6NKG5 1358 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 KDRP35968 1356 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 PTGDRQ13258 359 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 ARHGAP45Q92619 1136 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
SENP3-203ENST00000580231 VAMP4O75379 141 aa11.55□□□□□ -0.56
SENP3-203ENST00000580231 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
SENP3-203ENST00000580231 ATF7IPQ6VMQ6 1270 aa11.55□□□□□ -0.56
SENP3-203ENST00000580231 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
SENP3-203ENST00000580231 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
SENP3-203ENST00000580231 HOXC9P31274 260 aa11.54□□□□□ -0.56
SENP3-203ENST00000580231 FTSJ3Q8IY81 847 aaKnown RBP11.54□□□□□ -0.56
SENP3-203ENST00000580231 IP6K1Q92551 441 aa11.54□□□□□ -0.56
SENP3-203ENST00000580231 DDX19BQ9UMR2 479 aa11.54□□□□□ -0.56
SENP3-203ENST00000580231 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
SENP3-203ENST00000580231 CHL1O00533 1208 aa11.53□□□□□ -0.56
SENP3-203ENST00000580231 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
SENP3-203ENST00000580231 AEBP1Q8IUX7 1158 aa11.53□□□□□ -0.56
SENP3-203ENST00000580231 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms