RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 APLP1P51693 650 aa18.02■□□□□ 0.48
TRAF4-214ENST00000580073 C16orf71Q8IYS4 520 aaPredicted RBP18.02■□□□□ 0.48
TRAF4-214ENST00000580073 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
TRAF4-214ENST00000580073 BCORQ6W2J9 1755 aa18.02■□□□□ 0.47
TRAF4-214ENST00000580073 ZC3H4Q9UPT8 1303 aaKnown RBP18.01■□□□□ 0.47
TRAF4-214ENST00000580073 HMOX1P09601 288 aa18.01■□□□□ 0.47
TRAF4-214ENST00000580073 INTS5Q6P9B9 1019 aaKnown RBP18.01■□□□□ 0.47
TRAF4-214ENST00000580073 DNAJC10Q8IXB1 793 aa18.01■□□□□ 0.47
TRAF4-214ENST00000580073 DICER1Q9UPY3 1922 aaKnown RBP18■□□□□ 0.47
TRAF4-214ENST00000580073 ARFGEF2Q9Y6D5 1785 aa18■□□□□ 0.47
TRAF4-214ENST00000580073 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
TRAF4-214ENST00000580073 DDR1Q08345 913 aa18■□□□□ 0.47
TRAF4-214ENST00000580073 NARFQ9UHQ1 456 aa18■□□□□ 0.47
TRAF4-214ENST00000580073 CACNA1SQ13698 1873 aa18■□□□□ 0.47
TRAF4-214ENST00000580073 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
TRAF4-214ENST00000580073 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
TRAF4-214ENST00000580073 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
TRAF4-214ENST00000580073 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
TRAF4-214ENST00000580073 A0A087WZG4 1122 aa17.98■□□□□ 0.47
TRAF4-214ENST00000580073 STARD3NLO95772 234 aa17.98■□□□□ 0.47
TRAF4-214ENST00000580073 MTHFSDQ2M296 383 aaKnown RBP17.98■□□□□ 0.47
TRAF4-214ENST00000580073 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
TRAF4-214ENST00000580073 C9orf131Q5VYM1 1079 aa17.98■□□□□ 0.47
TRAF4-214ENST00000580073 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
TRAF4-214ENST00000580073 KCNA3P22001 575 aa17.97■□□□□ 0.47
TRAF4-214ENST00000580073 TM4SF1P30408 202 aa17.97■□□□□ 0.47
TRAF4-214ENST00000580073 TEFQ10587 303 aa17.97■□□□□ 0.47
TRAF4-214ENST00000580073 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
TRAF4-214ENST00000580073 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
TRAF4-214ENST00000580073 SLC39A6Q13433 755 aa17.96■□□□□ 0.47
TRAF4-214ENST00000580073 IFFO2Q5TF58 517 aa17.96■□□□□ 0.47
TRAF4-214ENST00000580073 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
TRAF4-214ENST00000580073 RBM46Q8TBY0 533 aaKnown RBP17.96■□□□□ 0.47
TRAF4-214ENST00000580073 TEX13AQ9BXU3 409 aaPredicted RBP17.96■□□□□ 0.47
TRAF4-214ENST00000580073 ZBTB1Q9Y2K1 713 aa17.96■□□□□ 0.47
TRAF4-214ENST00000580073 COL11A2P13942 1736 aaPredicted RBP17.95■□□□□ 0.46
TRAF4-214ENST00000580073 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
TRAF4-214ENST00000580073 PDZRN3Q9UPQ7 1066 aa17.95■□□□□ 0.46
TRAF4-214ENST00000580073 FER1L6Q2WGJ9 1857 aa17.95■□□□□ 0.46
TRAF4-214ENST00000580073 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
TRAF4-214ENST00000580073 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
TRAF4-214ENST00000580073 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
TRAF4-214ENST00000580073 FSTL1Q12841 308 aa17.94■□□□□ 0.46
TRAF4-214ENST00000580073 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
TRAF4-214ENST00000580073 HEG1Q9ULI3 1381 aa17.93■□□□□ 0.46
TRAF4-214ENST00000580073 CHRNA5P30532 468 aa17.93■□□□□ 0.46
TRAF4-214ENST00000580073 NFIXQ14938 502 aa17.93■□□□□ 0.46
TRAF4-214ENST00000580073 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
TRAF4-214ENST00000580073 CARMIL3Q8ND23 1372 aa17.92■□□□□ 0.46
TRAF4-214ENST00000580073 SERPINB2P05120 415 aa17.91■□□□□ 0.46
TRAF4-214ENST00000580073 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
TRAF4-214ENST00000580073 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
TRAF4-214ENST00000580073 H0YIN7 160 aa17.9■□□□□ 0.46
TRAF4-214ENST00000580073 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
TRAF4-214ENST00000580073 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
TRAF4-214ENST00000580073 LMNB1P20700 586 aa17.89■□□□□ 0.45
TRAF4-214ENST00000580073 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.45
TRAF4-214ENST00000580073 C2CD5Q86YS7 1000 aa17.89■□□□□ 0.45
TRAF4-214ENST00000580073 NUDCQ9Y266 331 aa17.89■□□□□ 0.45
TRAF4-214ENST00000580073 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.45
TRAF4-214ENST00000580073 NPHP1O15259 732 aa17.88■□□□□ 0.45
TRAF4-214ENST00000580073 PDE6BP35913 854 aa17.88■□□□□ 0.45
TRAF4-214ENST00000580073 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
TRAF4-214ENST00000580073 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
TRAF4-214ENST00000580073 DLG5Q8TDM6 1919 aa17.88■□□□□ 0.45
TRAF4-214ENST00000580073 ZNF496Q96IT1 587 aaPredicted RBP17.87■□□□□ 0.45
TRAF4-214ENST00000580073 BCL2L12Q9HB09 334 aa17.87■□□□□ 0.45
TRAF4-214ENST00000580073 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
TRAF4-214ENST00000580073 ST5P78524 1137 aa17.85■□□□□ 0.45
TRAF4-214ENST00000580073 RASSF7Q02833 373 aa17.85■□□□□ 0.45
TRAF4-214ENST00000580073 BICDL1Q6ZP65 573 aa17.85■□□□□ 0.45
TRAF4-214ENST00000580073 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
TRAF4-214ENST00000580073 BRIP1Q9BX63 1249 aa17.85■□□□□ 0.45
TRAF4-214ENST00000580073 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
TRAF4-214ENST00000580073 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
TRAF4-214ENST00000580073 SOGA3Q5TF21 947 aa17.84■□□□□ 0.45
TRAF4-214ENST00000580073 CNBD1Q8NA66 436 aa17.84■□□□□ 0.45
TRAF4-214ENST00000580073 IL17REQ8NFR9 667 aa17.84■□□□□ 0.45
TRAF4-214ENST00000580073 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
TRAF4-214ENST00000580073 GLTPD2A6NH11 291 aa17.83■□□□□ 0.44
TRAF4-214ENST00000580073 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
TRAF4-214ENST00000580073 SETDB2Q96T68 719 aa17.83■□□□□ 0.44
TRAF4-214ENST00000580073 RRAGCQ9HB90 399 aa17.83■□□□□ 0.44
TRAF4-214ENST00000580073 KDM3BQ7LBC6 1761 aa17.83■□□□□ 0.44
TRAF4-214ENST00000580073 SCN4AP35499 1836 aa17.82■□□□□ 0.44
TRAF4-214ENST00000580073 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
TRAF4-214ENST00000580073 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
TRAF4-214ENST00000580073 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
TRAF4-214ENST00000580073 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRAF4-214ENST00000580073 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
TRAF4-214ENST00000580073 NEFMP07197 916 aa17.81■□□□□ 0.44
TRAF4-214ENST00000580073 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
TRAF4-214ENST00000580073 CNKSR1Q969H4 720 aa17.81■□□□□ 0.44
TRAF4-214ENST00000580073 KLRG1Q96E93 195 aa17.81■□□□□ 0.44
TRAF4-214ENST00000580073 LTBP3Q9NS15 1303 aa17.8■□□□□ 0.44
TRAF4-214ENST00000580073 PRR5LQ6MZQ0 368 aa17.8■□□□□ 0.44
TRAF4-214ENST00000580073 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
TRAF4-214ENST00000580073 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
TRAF4-214ENST00000580073 NUP98P52948 1817 aa17.79■□□□□ 0.44
TRAF4-214ENST00000580073 RGL2O15211 777 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms