RNA–Protein interactions for RNA: ENST00000579988.1

SLC39A11-208, Transcript of solute carrier family 39 member 11, humanhuman

TSL 3

Gene SLC39A11, Length 910 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A11-208ENST00000579988 USPL1Q5W0Q7 1092 aa23.38■■□□□ 1.33
SLC39A11-208ENST00000579988 SIPA1L3O60292 1781 aaPredicted RBP23.37■■□□□ 1.33
SLC39A11-208ENST00000579988 KIF3CO14782 793 aa23.37■■□□□ 1.33
SLC39A11-208ENST00000579988 TM4SF1P30408 202 aa23.37■■□□□ 1.33
SLC39A11-208ENST00000579988 TTC5Q8N0Z6 440 aa23.37■■□□□ 1.33
SLC39A11-208ENST00000579988 NARFQ9UHQ1 456 aa23.37■■□□□ 1.33
SLC39A11-208ENST00000579988 NRXN2Q9P2S2 1712 aa23.36■■□□□ 1.33
SLC39A11-208ENST00000579988 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
SLC39A11-208ENST00000579988 GAS2L2Q8NHY3 880 aa23.36■■□□□ 1.33
SLC39A11-208ENST00000579988 ZBTB1Q9Y2K1 713 aa23.36■■□□□ 1.33
SLC39A11-208ENST00000579988 DLEC1Q9Y238 1755 aa23.35■■□□□ 1.33
SLC39A11-208ENST00000579988 STARD3NLO95772 234 aa23.34■■□□□ 1.33
SLC39A11-208ENST00000579988 TEFQ10587 303 aa23.34■■□□□ 1.33
SLC39A11-208ENST00000579988 SBF1O95248 1867 aa23.34■■□□□ 1.33
SLC39A11-208ENST00000579988 GNAT3A8MTJ3 354 aa23.33■■□□□ 1.33
SLC39A11-208ENST00000579988 CNGB1Q14028 1251 aaPredicted RBP23.33■■□□□ 1.33
SLC39A11-208ENST00000579988 CHRNA5P30532 468 aa23.32■■□□□ 1.32
SLC39A11-208ENST00000579988 NFIXQ14938 502 aa23.32■■□□□ 1.32
SLC39A11-208ENST00000579988 C9orf131Q5VYM1 1079 aa23.31■■□□□ 1.32
SLC39A11-208ENST00000579988 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
SLC39A11-208ENST00000579988 SCN7AQ01118 1682 aa23.31■■□□□ 1.32
SLC39A11-208ENST00000579988 A0A087WZG4 1122 aa23.3■■□□□ 1.32
SLC39A11-208ENST00000579988 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
SLC39A11-208ENST00000579988 TEX13AQ9BXU3 409 aaPredicted RBP23.3■■□□□ 1.32
SLC39A11-208ENST00000579988 TOMM70O94826 608 aa23.29■■□□□ 1.32
SLC39A11-208ENST00000579988 ZNF790Q6PG37 636 aa23.29■■□□□ 1.32
SLC39A11-208ENST00000579988 HEG1Q9ULI3 1381 aa23.28■■□□□ 1.32
SLC39A11-208ENST00000579988 IL17REQ8NFR9 667 aa23.28■■□□□ 1.32
SLC39A11-208ENST00000579988 BCL2L12Q9HB09 334 aa23.28■■□□□ 1.32
SLC39A11-208ENST00000579988 SERPINB2P05120 415 aa23.27■■□□□ 1.32
SLC39A11-208ENST00000579988 EIF5P55010 431 aaKnown RBP23.27■■□□□ 1.32
SLC39A11-208ENST00000579988 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
SLC39A11-208ENST00000579988 RNF181Q9P0P0 153 aa23.27■■□□□ 1.32
SLC39A11-208ENST00000579988 TNRC6CQ9HCJ0 1690 aaKnown RBP23.27■■□□□ 1.32
SLC39A11-208ENST00000579988 KDM2BQ8NHM5 1336 aa23.27■■□□□ 1.32
SLC39A11-208ENST00000579988 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.31
SLC39A11-208ENST00000579988 NMRK2Q9NPI5 230 aa23.26■■□□□ 1.31
SLC39A11-208ENST00000579988 APLP1P51693 650 aa23.25■■□□□ 1.31
SLC39A11-208ENST00000579988 FMNL2Q96PY5 1086 aa23.25■■□□□ 1.31
SLC39A11-208ENST00000579988 NUDCQ9Y266 331 aa23.25■■□□□ 1.31
SLC39A11-208ENST00000579988 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
SLC39A11-208ENST00000579988 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
SLC39A11-208ENST00000579988 NPM2Q86SE8 214 aaKnown RBP23.23■■□□□ 1.31
SLC39A11-208ENST00000579988 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
SLC39A11-208ENST00000579988 ZC3H4Q9UPT8 1303 aaKnown RBP23.23■■□□□ 1.31
SLC39A11-208ENST00000579988 ANKRD31Q8N7Z5 1873 aa23.23■■□□□ 1.31
SLC39A11-208ENST00000579988 CCDC88AQ3V6T2 1871 aa23.22■■□□□ 1.31
SLC39A11-208ENST00000579988 IL6STP40189 918 aaPredicted RBP23.22■■□□□ 1.31
SLC39A11-208ENST00000579988 TTLL6Q8N841 843 aa23.22■■□□□ 1.31
SLC39A11-208ENST00000579988 RBM46Q8TBY0 533 aaKnown RBP23.22■■□□□ 1.31
SLC39A11-208ENST00000579988 BTBD11A6QL63 1104 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 H0YIN7 160 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 BICDL1Q6ZP65 573 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 C2CD5Q86YS7 1000 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 ZNF330Q9Y3S2 320 aaPredicted RBP23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 CARMIL3Q8ND23 1372 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 BCORQ6W2J9 1755 aa23.21■■□□□ 1.31
SLC39A11-208ENST00000579988 PHACTR3Q96KR7 559 aa23.2■■□□□ 1.3
SLC39A11-208ENST00000579988 TIAM2Q8IVF5 1701 aa23.19■■□□□ 1.3
SLC39A11-208ENST00000579988 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
SLC39A11-208ENST00000579988 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 LMNB1P20700 586 aa23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 TBC1D9BQ66K14 1250 aa23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 TBC1D2BQ9UPU7 963 aa23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 COL11A2P13942 1736 aaPredicted RBP23.18■■□□□ 1.3
SLC39A11-208ENST00000579988 PPP2R1AP30153 589 aa23.17■■□□□ 1.3
SLC39A11-208ENST00000579988 PDE6BP35913 854 aa23.17■■□□□ 1.3
SLC39A11-208ENST00000579988 RASSF7Q02833 373 aa23.17■■□□□ 1.3
SLC39A11-208ENST00000579988 A1BGP04217 495 aa23.16■■□□□ 1.3
SLC39A11-208ENST00000579988 FSTL1Q12841 308 aa23.16■■□□□ 1.3
SLC39A11-208ENST00000579988 BRIP1Q9BX63 1249 aa23.16■■□□□ 1.3
SLC39A11-208ENST00000579988 DICER1Q9UPY3 1922 aaKnown RBP23.14■■□□□ 1.3
SLC39A11-208ENST00000579988 FER1L6Q2WGJ9 1857 aa23.14■■□□□ 1.29
SLC39A11-208ENST00000579988 PRR5LQ6MZQ0 368 aa23.14■■□□□ 1.29
SLC39A11-208ENST00000579988 SETDB2Q96T68 719 aa23.14■■□□□ 1.29
SLC39A11-208ENST00000579988 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
SLC39A11-208ENST00000579988 NPHP1O15259 732 aa23.13■■□□□ 1.29
SLC39A11-208ENST00000579988 KCNQ3O43525 872 aa23.13■■□□□ 1.29
SLC39A11-208ENST00000579988 CNBD1Q8NA66 436 aa23.13■■□□□ 1.29
SLC39A11-208ENST00000579988 RRAGCQ9HB90 399 aa23.13■■□□□ 1.29
SLC39A11-208ENST00000579988 ARFGEF2Q9Y6D5 1785 aa23.13■■□□□ 1.29
SLC39A11-208ENST00000579988 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
SLC39A11-208ENST00000579988 CAMTA2O94983 1202 aa23.12■■□□□ 1.29
SLC39A11-208ENST00000579988 SNRPA1P09661 255 aaKnown RBP23.12■■□□□ 1.29
SLC39A11-208ENST00000579988 DZIP3Q86Y13 1208 aaKnown RBP23.12■■□□□ 1.29
SLC39A11-208ENST00000579988 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.29
SLC39A11-208ENST00000579988 ST5P78524 1137 aa23.11■■□□□ 1.29
SLC39A11-208ENST00000579988 IFFO2Q5TF58 517 aa23.11■■□□□ 1.29
SLC39A11-208ENST00000579988 MCM10Q7L590 875 aa23.11■■□□□ 1.29
SLC39A11-208ENST00000579988 DLG5Q8TDM6 1919 aa23.1■■□□□ 1.29
SLC39A11-208ENST00000579988 LAMB4A4D0S4 1761 aa23.1■■□□□ 1.29
SLC39A11-208ENST00000579988 ZNF652Q9Y2D9 606 aa23.1■■□□□ 1.29
SLC39A11-208ENST00000579988 GLTPD2A6NH11 291 aa23.09■■□□□ 1.29
SLC39A11-208ENST00000579988 NFKBIEO00221 500 aa23.09■■□□□ 1.29
SLC39A11-208ENST00000579988 SMC1BQ8NDV3 1235 aa23.09■■□□□ 1.29
SLC39A11-208ENST00000579988 USP16Q9Y5T5 823 aa23.09■■□□□ 1.29
SLC39A11-208ENST00000579988 NEFMP07197 916 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms