RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CAPN15O75808 1086 aa16.7■□□□□ 0.26
CDK5RAP3-216ENST00000579853 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
CDK5RAP3-216ENST00000579853 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
CDK5RAP3-216ENST00000579853 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-216ENST00000579853 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-216ENST00000579853 RASSF7Q02833 373 aa16.69■□□□□ 0.26
CDK5RAP3-216ENST00000579853 AKAP4Q5JQC9 854 aa16.69■□□□□ 0.26
CDK5RAP3-216ENST00000579853 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
CDK5RAP3-216ENST00000579853 SCN11AQ9UI33 1791 aa16.69■□□□□ 0.26
CDK5RAP3-216ENST00000579853 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
CDK5RAP3-216ENST00000579853 NFIXQ14938 502 aa16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 DNAJC10Q8IXB1 793 aa16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 SLC52A2Q9HAB3 445 aa16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
CDK5RAP3-216ENST00000579853 COL15A1P39059 1388 aa16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 H0YIN7 160 aa16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 HSPA1AP0DMV8 641 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 HSPA1BP0DMV9 641 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 CYP19A1P11511 503 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 NRXN2Q9P2S2 1712 aa16.67■□□□□ 0.26
CDK5RAP3-216ENST00000579853 SERPINB2P05120 415 aa16.66■□□□□ 0.26
CDK5RAP3-216ENST00000579853 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
CDK5RAP3-216ENST00000579853 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
CDK5RAP3-216ENST00000579853 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
CDK5RAP3-216ENST00000579853 PANK3Q9H999 370 aa16.65■□□□□ 0.26
CDK5RAP3-216ENST00000579853 CCDC88AQ3V6T2 1871 aa16.64■□□□□ 0.25
CDK5RAP3-216ENST00000579853 TIAM2Q8IVF5 1701 aa16.63■□□□□ 0.25
CDK5RAP3-216ENST00000579853 A0A087WZG4 1122 aa16.63■□□□□ 0.25
CDK5RAP3-216ENST00000579853 ZBTB1Q9Y2K1 713 aa16.63■□□□□ 0.25
CDK5RAP3-216ENST00000579853 NFKBIEO00221 500 aa16.62■□□□□ 0.25
CDK5RAP3-216ENST00000579853 STARD3NLO95772 234 aa16.62■□□□□ 0.25
CDK5RAP3-216ENST00000579853 IL13P35225 146 aa16.62■□□□□ 0.25
CDK5RAP3-216ENST00000579853 MRC1P22897 1456 aa16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 RNMTO43148 476 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 PDE6BP35913 854 aa16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 BCL2L12Q9HB09 334 aa16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
CDK5RAP3-216ENST00000579853 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDK5RAP3-216ENST00000579853 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
CDK5RAP3-216ENST00000579853 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
CDK5RAP3-216ENST00000579853 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
CDK5RAP3-216ENST00000579853 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-216ENST00000579853 POTECB2RU33 542 aa16.59■□□□□ 0.25
CDK5RAP3-216ENST00000579853 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
CDK5RAP3-216ENST00000579853 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
CDK5RAP3-216ENST00000579853 LTBP3Q9NS15 1303 aa16.59■□□□□ 0.25
CDK5RAP3-216ENST00000579853 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-216ENST00000579853 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-216ENST00000579853 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.241e-12■■□□□ 12.2
CDK5RAP3-216ENST00000579853 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-216ENST00000579853 VIRMAQ69YN4 1812 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-216ENST00000579853 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
CDK5RAP3-216ENST00000579853 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
CDK5RAP3-216ENST00000579853 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
CDK5RAP3-216ENST00000579853 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
CDK5RAP3-216ENST00000579853 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-216ENST00000579853 FER1L6Q2WGJ9 1857 aa16.56■□□□□ 0.24
CDK5RAP3-216ENST00000579853 C21orf2O43822 256 aa16.56■□□□□ 0.24
CDK5RAP3-216ENST00000579853 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
CDK5RAP3-216ENST00000579853 IQCA1LA6NCM1 817 aa16.55■□□□□ 0.24
CDK5RAP3-216ENST00000579853 CNKSR1Q969H4 720 aa16.55■□□□□ 0.24
CDK5RAP3-216ENST00000579853 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
CDK5RAP3-216ENST00000579853 NPHP1O15259 732 aa16.54■□□□□ 0.24
CDK5RAP3-216ENST00000579853 TBC1D9BQ66K14 1250 aa16.54■□□□□ 0.24
CDK5RAP3-216ENST00000579853 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
CDK5RAP3-216ENST00000579853 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
CDK5RAP3-216ENST00000579853 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 HMOX1P09601 288 aa16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 HSPA5P11021 654 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 IL6STP40189 918 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 SETDB2Q96T68 719 aa16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 MKRN1Q9UHC7 482 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-216ENST00000579853 ST5P78524 1137 aa16.52■□□□□ 0.24
CDK5RAP3-216ENST00000579853 TEFQ10587 303 aa16.52■□□□□ 0.24
CDK5RAP3-216ENST00000579853 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
CDK5RAP3-216ENST00000579853 CNBD1Q8NA66 436 aa16.52■□□□□ 0.24
CDK5RAP3-216ENST00000579853 AIDAQ96BJ3 306 aa16.52■□□□□ 0.24
CDK5RAP3-216ENST00000579853 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-216ENST00000579853 CNTNAP1P78357 1384 aa16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 SCN7AQ01118 1682 aa16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 DDNO94850 711 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 ZNF790Q6PG37 636 aa16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 SCN4AP35499 1836 aa16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
CDK5RAP3-216ENST00000579853 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-216ENST00000579853 SRGNP10124 158 aa16.5■□□□□ 0.23
CDK5RAP3-216ENST00000579853 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-216ENST00000579853 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-216ENST00000579853 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms