RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 COL3A1P02461 1466 aaPredicted RBP18.31■□□□□ 0.52
GGA3-208ENST00000579743 COL15A1P39059 1388 aa18.3■□□□□ 0.52
GGA3-208ENST00000579743 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
GGA3-208ENST00000579743 ZNF526Q8TF50 670 aaPredicted RBP18.3■□□□□ 0.52
GGA3-208ENST00000579743 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
GGA3-208ENST00000579743 VIRMAQ69YN4 1812 aaKnown RBP18.29■□□□□ 0.52
GGA3-208ENST00000579743 TM4SF1P30408 202 aa18.29■□□□□ 0.52
GGA3-208ENST00000579743 DALRD3Q5D0E6 543 aaKnown RBP18.29■□□□□ 0.52
GGA3-208ENST00000579743 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
GGA3-208ENST00000579743 ZBTB1Q9Y2K1 713 aa18.29■□□□□ 0.52
GGA3-208ENST00000579743 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
GGA3-208ENST00000579743 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
GGA3-208ENST00000579743 PPP2R1AP30153 589 aa18.28■□□□□ 0.52
GGA3-208ENST00000579743 ADCY9O60503 1353 aa18.28■□□□□ 0.52
GGA3-208ENST00000579743 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
GGA3-208ENST00000579743 N4BP2Q86UW6 1770 aaPredicted RBP18.27■□□□□ 0.52
GGA3-208ENST00000579743 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
GGA3-208ENST00000579743 DDR1Q08345 913 aa18.27■□□□□ 0.52
GGA3-208ENST00000579743 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.51
GGA3-208ENST00000579743 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
GGA3-208ENST00000579743 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
GGA3-208ENST00000579743 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
GGA3-208ENST00000579743 NFIXQ14938 502 aa18.25■□□□□ 0.51
GGA3-208ENST00000579743 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
GGA3-208ENST00000579743 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
GGA3-208ENST00000579743 SERPINB2P05120 415 aa18.24■□□□□ 0.51
GGA3-208ENST00000579743 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
GGA3-208ENST00000579743 CEMIPQ8WUJ3 1361 aa18.24■□□□□ 0.51
GGA3-208ENST00000579743 UBR2Q8IWV8 1755 aa18.23■□□□□ 0.51
GGA3-208ENST00000579743 NPHP1O15259 732 aa18.23■□□□□ 0.51
GGA3-208ENST00000579743 KCNA3P22001 575 aa18.23■□□□□ 0.51
GGA3-208ENST00000579743 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
GGA3-208ENST00000579743 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
GGA3-208ENST00000579743 CHRNA5P30532 468 aa18.22■□□□□ 0.51
GGA3-208ENST00000579743 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
GGA3-208ENST00000579743 KIAA1551Q9HCM1 1747 aa18.21■□□□□ 0.51
GGA3-208ENST00000579743 H0YIN7 160 aa18.21■□□□□ 0.51
GGA3-208ENST00000579743 BICDL1Q6ZP65 573 aa18.21■□□□□ 0.51
GGA3-208ENST00000579743 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
GGA3-208ENST00000579743 GOLGB1Q14789 3259 aaKnown RBP18.19■□□□□ 0.5
GGA3-208ENST00000579743 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 TTLL6Q8N841 843 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 SETDB2Q96T68 719 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 TBC1D2BQ9UPU7 963 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 KDM2BQ8NHM5 1336 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
GGA3-208ENST00000579743 A1BGP04217 495 aa18.18■□□□□ 0.5
GGA3-208ENST00000579743 PDE6BP35913 854 aa18.18■□□□□ 0.5
GGA3-208ENST00000579743 MCM10Q7L590 875 aa18.18■□□□□ 0.5
GGA3-208ENST00000579743 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
GGA3-208ENST00000579743 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
GGA3-208ENST00000579743 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
GGA3-208ENST00000579743 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
GGA3-208ENST00000579743 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
GGA3-208ENST00000579743 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
GGA3-208ENST00000579743 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
GGA3-208ENST00000579743 RNF181Q9P0P0 153 aa18.17■□□□□ 0.5
GGA3-208ENST00000579743 BRCA1P38398 1863 aaKnown RBP18.17■□□□□ 0.5
GGA3-208ENST00000579743 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
GGA3-208ENST00000579743 TOMM70O94826 608 aa18.16■□□□□ 0.5
GGA3-208ENST00000579743 HSPA6P17066 643 aa18.16■□□□□ 0.5
GGA3-208ENST00000579743 ST5P78524 1137 aa18.16■□□□□ 0.5
GGA3-208ENST00000579743 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
GGA3-208ENST00000579743 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
GGA3-208ENST00000579743 BRIP1Q9BX63 1249 aa18.15■□□□□ 0.5
GGA3-208ENST00000579743 KIF3CO14782 793 aa18.14■□□□□ 0.49
GGA3-208ENST00000579743 KCNQ3O43525 872 aa18.14■□□□□ 0.49
GGA3-208ENST00000579743 CLEC4GQ6UXB4 293 aa18.14■□□□□ 0.49
GGA3-208ENST00000579743 CNBD1Q8NA66 436 aa18.14■□□□□ 0.49
GGA3-208ENST00000579743 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
GGA3-208ENST00000579743 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.49
GGA3-208ENST00000579743 NRXN2Q9P2S2 1712 aa18.13■□□□□ 0.49
GGA3-208ENST00000579743 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.494e-6■□□□□ 8.2
GGA3-208ENST00000579743 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
GGA3-208ENST00000579743 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
GGA3-208ENST00000579743 LMNB1P20700 586 aa18.12■□□□□ 0.49
GGA3-208ENST00000579743 DCTN1Q14203 1278 aa18.12■□□□□ 0.49
GGA3-208ENST00000579743 RALBP1Q15311 655 aa18.12■□□□□ 0.49
GGA3-208ENST00000579743 RGL2O15211 777 aa18.11■□□□□ 0.49
GGA3-208ENST00000579743 PRR5LQ6MZQ0 368 aa18.11■□□□□ 0.49
GGA3-208ENST00000579743 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
GGA3-208ENST00000579743 CNKSR1Q969H4 720 aa18.1■□□□□ 0.49
GGA3-208ENST00000579743 SCN7AQ01118 1682 aa18.09■□□□□ 0.49
GGA3-208ENST00000579743 APLP1P51693 650 aa18.09■□□□□ 0.49
GGA3-208ENST00000579743 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
GGA3-208ENST00000579743 SOGA3Q5TF21 947 aa18.09■□□□□ 0.49
GGA3-208ENST00000579743 TPTE2Q6XPS3 522 aa18.09■□□□□ 0.49
GGA3-208ENST00000579743 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
GGA3-208ENST00000579743 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
GGA3-208ENST00000579743 RBM46Q8TBY0 533 aaKnown RBP18.08■□□□□ 0.48
GGA3-208ENST00000579743 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
GGA3-208ENST00000579743 PIP4K2AP48426 406 aaPredicted RBP18.07■□□□□ 0.48
GGA3-208ENST00000579743 STYK1Q6J9G0 422 aa18.07■□□□□ 0.48
GGA3-208ENST00000579743 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
GGA3-208ENST00000579743 PRAMEF22A3QJZ6 481 aa18.06■□□□□ 0.48
GGA3-208ENST00000579743 RASSF7Q02833 373 aa18.06■□□□□ 0.48
GGA3-208ENST00000579743 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
GGA3-208ENST00000579743 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
GGA3-208ENST00000579743 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms