RNA–Protein interactions for RNA: ENST00000579563.1

PHF12-208, Transcript of PHD finger protein 12, humanhuman

TSL 4

Gene PHF12, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-208ENST00000579563 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
PHF12-208ENST00000579563 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
PHF12-208ENST00000579563 LOC102724428A0A0B4J2F2 783 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 KCNQ2O43526 872 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 TRIM27P14373 513 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
PHF12-208ENST00000579563 SIK1P57059 783 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 CRBNQ96SW2 442 aa13.05□□□□□ -0.32
PHF12-208ENST00000579563 NEXNQ0ZGT2 675 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
PHF12-208ENST00000579563 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 ARXQ96QS3 562 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 COG6Q9Y2V7 657 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 ZNF330Q9Y3S2 320 aaPredicted RBP13.04□□□□□ -0.32
PHF12-208ENST00000579563 SHANK3Q9BYB0 1731 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
PHF12-208ENST00000579563 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
PHF12-208ENST00000579563 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
PHF12-208ENST00000579563 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
PHF12-208ENST00000579563 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
PHF12-208ENST00000579563 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
PHF12-208ENST00000579563 TRIM37O94972 964 aa13.02□□□□□ -0.33
PHF12-208ENST00000579563 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.33
PHF12-208ENST00000579563 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
PHF12-208ENST00000579563 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.33
PHF12-208ENST00000579563 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
PHF12-208ENST00000579563 A1BGP04217 495 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 C20orf194Q5TEA3 1177 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 G2E3Q7L622 706 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 XAGE3Q8WTP9 111 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 CCDC136Q96JN2 1154 aa13.01□□□□□ -0.33
PHF12-208ENST00000579563 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
PHF12-208ENST00000579563 DOT1LQ8TEK3 1739 aa13□□□□□ -0.33
PHF12-208ENST00000579563 A0A087WZG4 1122 aa13□□□□□ -0.33
PHF12-208ENST00000579563 ANXA1P04083 346 aa13□□□□□ -0.33
PHF12-208ENST00000579563 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
PHF12-208ENST00000579563 ANKRD13DQ6ZTN6 518 aa13□□□□□ -0.33
PHF12-208ENST00000579563 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
PHF12-208ENST00000579563 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
PHF12-208ENST00000579563 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 ABCC4O15439 1325 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 APBA3O96018 575 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 IL6STP40189 918 aaPredicted RBP12.99□□□□□ -0.33
PHF12-208ENST00000579563 SLC27A3Q5K4L6 730 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
PHF12-208ENST00000579563 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
PHF12-208ENST00000579563 RGS12O14924 1447 aa12.98□□□□□ -0.33
PHF12-208ENST00000579563 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
PHF12-208ENST00000579563 PDIA6Q15084 440 aa12.98□□□□□ -0.33
PHF12-208ENST00000579563 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
PHF12-208ENST00000579563 HSP90AB3PQ58FF7 597 aa12.98□□□□□ -0.33
PHF12-208ENST00000579563 PLBD2Q8NHP8 589 aa12.98□□□□□ -0.33
PHF12-208ENST00000579563 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
PHF12-208ENST00000579563 F6X3S4 739 aa12.97□□□□□ -0.33
PHF12-208ENST00000579563 GNAI3P08754 354 aa12.97□□□□□ -0.33
PHF12-208ENST00000579563 RLBP1P12271 317 aa12.97□□□□□ -0.33
PHF12-208ENST00000579563 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
PHF12-208ENST00000579563 PELP1Q8IZL8 1130 aaKnown RBP12.97□□□□□ -0.33
PHF12-208ENST00000579563 AK7Q96M32 723 aa12.97□□□□□ -0.33
PHF12-208ENST00000579563 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 PIP4K2AP48426 406 aaPredicted RBP12.96□□□□□ -0.33
PHF12-208ENST00000579563 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
PHF12-208ENST00000579563 NBPF14Q5TI25 921 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
PHF12-208ENST00000579563 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 LINS1Q8NG48 757 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
PHF12-208ENST00000579563 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 ITGB4P16144 1822 aa12.96□□□□□ -0.33
PHF12-208ENST00000579563 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
PHF12-208ENST00000579563 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
PHF12-208ENST00000579563 SLC4A9Q96Q91 983 aa12.95□□□□□ -0.34
PHF12-208ENST00000579563 METTL22Q9BUU2 404 aaPredicted RBP12.95□□□□□ -0.34
PHF12-208ENST00000579563 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
PHF12-208ENST00000579563 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
PHF12-208ENST00000579563 ZBTB1Q9Y2K1 713 aa12.95□□□□□ -0.34
PHF12-208ENST00000579563 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
PHF12-208ENST00000579563 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
PHF12-208ENST00000579563 NHSQ6T4R5 1651 aa12.94□□□□□ -0.34
PHF12-208ENST00000579563 PLSCR1O15162 318 aa12.94□□□□□ -0.34
PHF12-208ENST00000579563 UBTFL1P0CB47 393 aaPredicted RBP12.94□□□□□ -0.34
PHF12-208ENST00000579563 ITPK1Q13572 414 aa12.94□□□□□ -0.34
PHF12-208ENST00000579563 MYD88Q99836 296 aa12.94□□□□□ -0.34
PHF12-208ENST00000579563 ZBTB3Q9H5J0 574 aa12.94□□□□□ -0.34
PHF12-208ENST00000579563 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
PHF12-208ENST00000579563 ERVV-1B6SEH8 477 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms