RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 DNAJC10Q8IXB1 793 aa17.85■□□□□ 0.45
CSNK1D-209ENST00000578904 TAF1LQ8IZX4 1826 aa17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 COL5A3P25940 1745 aaPredicted RBP17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 HOXB7P09629 217 aa17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 MS4A1P11836 297 aa17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 RRP1P56182 461 aaKnown RBP17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 KRT24Q2M2I5 525 aa17.84■□□□□ 0.45
CSNK1D-209ENST00000578904 VAMP4O75379 141 aa17.83■□□□□ 0.44
CSNK1D-209ENST00000578904 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-209ENST00000578904 HMGB2P26583 209 aaKnown RBP17.83■□□□□ 0.44
CSNK1D-209ENST00000578904 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
CSNK1D-209ENST00000578904 TEX13AQ9BXU3 409 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-209ENST00000578904 C4BP0C0L5 1744 aa17.83■□□□□ 0.44
CSNK1D-209ENST00000578904 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
CSNK1D-209ENST00000578904 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
CSNK1D-209ENST00000578904 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-209ENST00000578904 ERICH6BQ5W0A0 696 aa17.82■□□□□ 0.44
CSNK1D-209ENST00000578904 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
CSNK1D-209ENST00000578904 STARD3NLO95772 234 aa17.81■□□□□ 0.44
CSNK1D-209ENST00000578904 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
CSNK1D-209ENST00000578904 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
CSNK1D-209ENST00000578904 CYP19A1P11511 503 aaPredicted RBP17.8■□□□□ 0.44
CSNK1D-209ENST00000578904 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
CSNK1D-209ENST00000578904 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
CSNK1D-209ENST00000578904 AK7Q96M32 723 aa17.8■□□□□ 0.44
CSNK1D-209ENST00000578904 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
CSNK1D-209ENST00000578904 CNTNAP4Q9C0A0 1308 aa17.79■□□□□ 0.44
CSNK1D-209ENST00000578904 CRKLP46109 303 aaKnown RBP17.79■□□□□ 0.44
CSNK1D-209ENST00000578904 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-209ENST00000578904 STK32BQ9NY57 414 aa17.79■□□□□ 0.44
CSNK1D-209ENST00000578904 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
CSNK1D-209ENST00000578904 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 ZNF827Q17R98 1081 aa17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 NBPF14Q5TI25 921 aa17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 TSPYL6Q8N831 410 aa17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 CCDC87Q9NVE4 849 aa17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
CSNK1D-209ENST00000578904 GNPATO15228 680 aa17.77■□□□□ 0.44
CSNK1D-209ENST00000578904 BCAR3O75815 825 aa17.77■□□□□ 0.44
CSNK1D-209ENST00000578904 ZKSCAN2Q63HK3 967 aa17.77■□□□□ 0.44
CSNK1D-209ENST00000578904 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
CSNK1D-209ENST00000578904 NECTIN2Q92692 538 aa17.77■□□□□ 0.44
CSNK1D-209ENST00000578904 LRP5O75197 1615 aa17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 FKBP8Q14318 412 aa17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 RC3H1Q5TC82 1133 aaKnown RBP17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 FRAT1Q92837 279 aaPredicted RBP17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 ZBTB1Q9Y2K1 713 aa17.76■□□□□ 0.43
CSNK1D-209ENST00000578904 A1BGP04217 495 aa17.75■□□□□ 0.43
CSNK1D-209ENST00000578904 SLC15A2Q16348 729 aa17.75■□□□□ 0.43
CSNK1D-209ENST00000578904 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-209ENST00000578904 ARHGAP45Q92619 1136 aa17.75■□□□□ 0.43
CSNK1D-209ENST00000578904 TFCP2L1Q9NZI6 479 aa17.75■□□□□ 0.43
CSNK1D-209ENST00000578904 MYH14Q7Z406 1995 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-209ENST00000578904 PIP4K2AP48426 406 aaPredicted RBP17.74■□□□□ 0.43
CSNK1D-209ENST00000578904 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
CSNK1D-209ENST00000578904 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-209ENST00000578904 TUBGCP6Q96RT7 1819 aa17.74■□□□□ 0.43
CSNK1D-209ENST00000578904 ERBB4Q15303 1308 aa17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 PHF14O94880 888 aa17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 FTSJ3Q8IY81 847 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 ZNF330Q9Y3S2 320 aaPredicted RBP17.73■□□□□ 0.43
CSNK1D-209ENST00000578904 RPS6KA4O75676 772 aa17.72■□□□□ 0.43
CSNK1D-209ENST00000578904 API5Q9BZZ5 524 aaKnown RBP17.72■□□□□ 0.43
CSNK1D-209ENST00000578904 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
CSNK1D-209ENST00000578904 QSER1Q2KHR3 1735 aa17.72■□□□□ 0.43
CSNK1D-209ENST00000578904 PTPRCP08575 1304 aa17.72■□□□□ 0.43
CSNK1D-209ENST00000578904 COL15A1P39059 1388 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 MYL6BP14649 208 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 SSFA2P28290 1259 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 ATF7IPQ6VMQ6 1270 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 NOB1Q9ULX3 412 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-209ENST00000578904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
CSNK1D-209ENST00000578904 PLIN1O60240 522 aa17.7■□□□□ 0.42
CSNK1D-209ENST00000578904 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
CSNK1D-209ENST00000578904 DBF4Q9UBU7 674 aaPredicted RBP17.7■□□□□ 0.42
CSNK1D-209ENST00000578904 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
CSNK1D-209ENST00000578904 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 ANXA1P04083 346 aa17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 ADRA2BP18089 450 aa17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 AAMPQ13685 434 aa17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 R3HDM1Q15032 1099 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 PROSER3Q2NL68 480 aa17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 DZIP1LQ8IYY4 767 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-209ENST00000578904 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms