RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PTPRCP08575 1304 aa17.14■□□□□ 0.33
SRSF1-202ENST00000578430 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
SRSF1-202ENST00000578430 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
SRSF1-202ENST00000578430 API5Q9BZZ5 524 aaKnown RBP17.13■□□□□ 0.33
SRSF1-202ENST00000578430 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
SRSF1-202ENST00000578430 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
SRSF1-202ENST00000578430 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
SRSF1-202ENST00000578430 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
SRSF1-202ENST00000578430 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
SRSF1-202ENST00000578430 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
SRSF1-202ENST00000578430 ACSBG1Q96GR2 724 aa17.11■□□□□ 0.33
SRSF1-202ENST00000578430 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
SRSF1-202ENST00000578430 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
SRSF1-202ENST00000578430 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
SRSF1-202ENST00000578430 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
SRSF1-202ENST00000578430 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
SRSF1-202ENST00000578430 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
SRSF1-202ENST00000578430 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
SRSF1-202ENST00000578430 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
SRSF1-202ENST00000578430 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
SRSF1-202ENST00000578430 TRIM27P14373 513 aa17.09■□□□□ 0.33
SRSF1-202ENST00000578430 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
SRSF1-202ENST00000578430 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SRSF1-202ENST00000578430 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
SRSF1-202ENST00000578430 C5P01031 1676 aa17.09■□□□□ 0.33
SRSF1-202ENST00000578430 AAMPQ13685 434 aa17.08■□□□□ 0.32
SRSF1-202ENST00000578430 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
SRSF1-202ENST00000578430 KCNQ2O43526 872 aa17.07■□□□□ 0.32
SRSF1-202ENST00000578430 FLIIQ13045 1269 aa17.07■□□□□ 0.32
SRSF1-202ENST00000578430 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
SRSF1-202ENST00000578430 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
SRSF1-202ENST00000578430 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
SRSF1-202ENST00000578430 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
SRSF1-202ENST00000578430 ABCC4O15439 1325 aa17.06■□□□□ 0.32
SRSF1-202ENST00000578430 SBF2Q86WG5 1849 aa17.06■□□□□ 0.32
SRSF1-202ENST00000578430 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
SRSF1-202ENST00000578430 STARD3NLO95772 234 aa17.06■□□□□ 0.32
SRSF1-202ENST00000578430 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
SRSF1-202ENST00000578430 ZNF831Q5JPB2 1677 aa17.06■□□□□ 0.32
SRSF1-202ENST00000578430 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
SRSF1-202ENST00000578430 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
SRSF1-202ENST00000578430 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
SRSF1-202ENST00000578430 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
SRSF1-202ENST00000578430 LRP5O75197 1615 aa17.05■□□□□ 0.32
SRSF1-202ENST00000578430 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
SRSF1-202ENST00000578430 SIK1P57059 783 aa17.04■□□□□ 0.32
SRSF1-202ENST00000578430 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-202ENST00000578430 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
SRSF1-202ENST00000578430 PDIA6Q15084 440 aa17.04■□□□□ 0.32
SRSF1-202ENST00000578430 G2E3Q7L622 706 aa17.04■□□□□ 0.32
SRSF1-202ENST00000578430 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
SRSF1-202ENST00000578430 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
SRSF1-202ENST00000578430 RLBP1P12271 317 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 FAM182BQ5T319 152 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 BTAF1O14981 1849 aa17.03■□□□□ 0.32
SRSF1-202ENST00000578430 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.32
SRSF1-202ENST00000578430 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-202ENST00000578430 HMGB2P26583 209 aaKnown RBP17.02■□□□□ 0.32
SRSF1-202ENST00000578430 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
SRSF1-202ENST00000578430 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.32
SRSF1-202ENST00000578430 PPP4R2Q9NY27 417 aa17.02■□□□□ 0.32
SRSF1-202ENST00000578430 COG6Q9Y2V7 657 aa17.02■□□□□ 0.32
SRSF1-202ENST00000578430 CYP19A1P11511 503 aaPredicted RBP17.01■□□□□ 0.31
SRSF1-202ENST00000578430 BAG6P46379 1132 aa17.01■□□□□ 0.31
SRSF1-202ENST00000578430 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
SRSF1-202ENST00000578430 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
SRSF1-202ENST00000578430 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
SRSF1-202ENST00000578430 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
SRSF1-202ENST00000578430 ATP6V1AP38606 617 aa17■□□□□ 0.31
SRSF1-202ENST00000578430 TJP1Q07157 1748 aa17■□□□□ 0.31
SRSF1-202ENST00000578430 PROSER3Q2NL68 480 aa17■□□□□ 0.31
SRSF1-202ENST00000578430 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
SRSF1-202ENST00000578430 ANXA1P04083 346 aa16.99■□□□□ 0.31
SRSF1-202ENST00000578430 MYL6BP14649 208 aa16.99■□□□□ 0.31
SRSF1-202ENST00000578430 KSR2Q6VAB6 950 aa16.99■□□□□ 0.31
SRSF1-202ENST00000578430 ITPRIPQ8IWB1 547 aa16.99■□□□□ 0.31
SRSF1-202ENST00000578430 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
SRSF1-202ENST00000578430 A1BGP04217 495 aa16.98■□□□□ 0.31
SRSF1-202ENST00000578430 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
SRSF1-202ENST00000578430 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
SRSF1-202ENST00000578430 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
SRSF1-202ENST00000578430 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
SRSF1-202ENST00000578430 TNS1Q9HBL0 1735 aaKnown RBP16.97■□□□□ 0.31
SRSF1-202ENST00000578430 COPS6Q7L5N1 327 aa16.97■□□□□ 0.31
SRSF1-202ENST00000578430 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
SRSF1-202ENST00000578430 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
SRSF1-202ENST00000578430 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
SRSF1-202ENST00000578430 ATP10DQ9P241 1426 aa16.96■□□□□ 0.31
SRSF1-202ENST00000578430 LY75O60449 1722 aa16.96■□□□□ 0.31
SRSF1-202ENST00000578430 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
SRSF1-202ENST00000578430 IL6STP40189 918 aaPredicted RBP16.96■□□□□ 0.31
SRSF1-202ENST00000578430 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
SRSF1-202ENST00000578430 CCDC87Q9NVE4 849 aa16.96■□□□□ 0.31
SRSF1-202ENST00000578430 ADCY9O60503 1353 aa16.96■□□□□ 0.31
SRSF1-202ENST00000578430 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
SRSF1-202ENST00000578430 N4BP2Q86UW6 1770 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms