RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
PSMD11-207ENST00000578397 POLA2Q14181 598 aa18.64■□□□□ 0.57
PSMD11-207ENST00000578397 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
PSMD11-207ENST00000578397 SRP68Q9UHB9 627 aaKnown RBP18.64■□□□□ 0.57
PSMD11-207ENST00000578397 KCPQ6ZWJ8 1503 aa18.64■□□□□ 0.57
PSMD11-207ENST00000578397 TJP1Q07157 1748 aa18.63■□□□□ 0.57
PSMD11-207ENST00000578397 SOS1Q07889 1333 aaPredicted RBP18.63■□□□□ 0.57
PSMD11-207ENST00000578397 ZPR1O75312 459 aa18.62■□□□□ 0.57
PSMD11-207ENST00000578397 FKBP8Q14318 412 aa18.62■□□□□ 0.57
PSMD11-207ENST00000578397 ZNF790Q6PG37 636 aa18.62■□□□□ 0.57
PSMD11-207ENST00000578397 C10orf71Q711Q0 1435 aa18.62■□□□□ 0.57
PSMD11-207ENST00000578397 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
PSMD11-207ENST00000578397 STARD3NLO95772 234 aa18.61■□□□□ 0.57
PSMD11-207ENST00000578397 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
PSMD11-207ENST00000578397 ZBTB1Q9Y2K1 713 aa18.61■□□□□ 0.57
PSMD11-207ENST00000578397 PXDNLA1KZ92 1463 aa18.6■□□□□ 0.57
PSMD11-207ENST00000578397 ZNF496Q96IT1 587 aaPredicted RBP18.6■□□□□ 0.57
PSMD11-207ENST00000578397 NARFQ9UHQ1 456 aa18.6■□□□□ 0.57
PSMD11-207ENST00000578397 TM4SF1P30408 202 aa18.59■□□□□ 0.57
PSMD11-207ENST00000578397 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
PSMD11-207ENST00000578397 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
PSMD11-207ENST00000578397 COL15A1P39059 1388 aa18.58■□□□□ 0.57
PSMD11-207ENST00000578397 HEG1Q9ULI3 1381 aa18.58■□□□□ 0.57
PSMD11-207ENST00000578397 C4AP0C0L4 1744 aa18.58■□□□□ 0.57
PSMD11-207ENST00000578397 A0A0G2JLW4 131 aa18.58■□□□□ 0.56
PSMD11-207ENST00000578397 DDR1Q08345 913 aa18.58■□□□□ 0.56
PSMD11-207ENST00000578397 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
PSMD11-207ENST00000578397 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
PSMD11-207ENST00000578397 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
PSMD11-207ENST00000578397 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
PSMD11-207ENST00000578397 DPEP1P16444 411 aa18.57■□□□□ 0.56
PSMD11-207ENST00000578397 KIF13BQ9NQT8 1826 aa18.56■□□□□ 0.56
PSMD11-207ENST00000578397 A0A087WZG4 1122 aa18.56■□□□□ 0.56
PSMD11-207ENST00000578397 POLRMTO00411 1230 aaKnown RBP18.56■□□□□ 0.56
PSMD11-207ENST00000578397 CANXP27824 592 aaKnown RBP18.56■□□□□ 0.56
PSMD11-207ENST00000578397 EIF5P55010 431 aaKnown RBP18.56■□□□□ 0.56
PSMD11-207ENST00000578397 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
PSMD11-207ENST00000578397 UBR2Q8IWV8 1755 aa18.55■□□□□ 0.56
PSMD11-207ENST00000578397 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
PSMD11-207ENST00000578397 NEFMP07197 916 aa18.54■□□□□ 0.56
PSMD11-207ENST00000578397 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
PSMD11-207ENST00000578397 KCNA3P22001 575 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 C1QTNF8P60827 252 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 NFIXQ14938 502 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 MCM10Q7L590 875 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 ADCY9O60503 1353 aa18.53■□□□□ 0.56
PSMD11-207ENST00000578397 ATP10DQ9P241 1426 aa18.52■□□□□ 0.56
PSMD11-207ENST00000578397 IL6STP40189 918 aaPredicted RBP18.52■□□□□ 0.56
PSMD11-207ENST00000578397 KCNQ3O43525 872 aa18.51■□□□□ 0.55
PSMD11-207ENST00000578397 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
PSMD11-207ENST00000578397 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
PSMD11-207ENST00000578397 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
PSMD11-207ENST00000578397 KIAA1551Q9HCM1 1747 aa18.5■□□□□ 0.55
PSMD11-207ENST00000578397 RALBP1Q15311 655 aa18.5■□□□□ 0.55
PSMD11-207ENST00000578397 A1BGP04217 495 aa18.49■□□□□ 0.55
PSMD11-207ENST00000578397 SERPINB2P05120 415 aa18.49■□□□□ 0.55
PSMD11-207ENST00000578397 SNRPA1P09661 255 aaKnown RBP18.49■□□□□ 0.55
PSMD11-207ENST00000578397 DCTN1Q14203 1278 aa18.49■□□□□ 0.55
PSMD11-207ENST00000578397 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
PSMD11-207ENST00000578397 DALRD3Q5D0E6 543 aaKnown RBP18.49■□□□□ 0.55
PSMD11-207ENST00000578397 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
PSMD11-207ENST00000578397 GPBP1L1Q9HC44 474 aaPredicted RBP18.49■□□□□ 0.55
PSMD11-207ENST00000578397 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
PSMD11-207ENST00000578397 USP16Q9Y5T5 823 aa18.48■□□□□ 0.55
PSMD11-207ENST00000578397 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
PSMD11-207ENST00000578397 CHRNA5P30532 468 aa18.47■□□□□ 0.55
PSMD11-207ENST00000578397 TBC1D2BQ9UPU7 963 aa18.47■□□□□ 0.55
PSMD11-207ENST00000578397 ZNF330Q9Y3S2 320 aaPredicted RBP18.47■□□□□ 0.55
PSMD11-207ENST00000578397 NFE2L2Q16236 605 aa18.46■□□□□ 0.55
PSMD11-207ENST00000578397 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.55
PSMD11-207ENST00000578397 DDX10Q13206 875 aaKnown RBP18.45■□□□□ 0.54
PSMD11-207ENST00000578397 TBC1D9BQ66K14 1250 aa18.45■□□□□ 0.54
PSMD11-207ENST00000578397 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
PSMD11-207ENST00000578397 CAMTA2O94983 1202 aa18.44■□□□□ 0.54
PSMD11-207ENST00000578397 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
PSMD11-207ENST00000578397 DZIP3Q86Y13 1208 aaKnown RBP18.43■□□□□ 0.54
PSMD11-207ENST00000578397 ZNF526Q8TF50 670 aaPredicted RBP18.43■□□□□ 0.54
PSMD11-207ENST00000578397 PDZRN3Q9UPQ7 1066 aa18.43■□□□□ 0.54
PSMD11-207ENST00000578397 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
PSMD11-207ENST00000578397 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
PSMD11-207ENST00000578397 H0YIN7 160 aa18.42■□□□□ 0.54
PSMD11-207ENST00000578397 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
PSMD11-207ENST00000578397 SETDB2Q96T68 719 aa18.42■□□□□ 0.54
PSMD11-207ENST00000578397 NRXN2Q9P2S2 1712 aa18.42■□□□□ 0.54
PSMD11-207ENST00000578397 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
PSMD11-207ENST00000578397 RGL2O15211 777 aa18.41■□□□□ 0.54
PSMD11-207ENST00000578397 C2CD5Q86YS7 1000 aa18.41■□□□□ 0.54
PSMD11-207ENST00000578397 BRIP1Q9BX63 1249 aa18.41■□□□□ 0.54
PSMD11-207ENST00000578397 MIS18AQ9NYP9 233 aa18.41■□□□□ 0.54
PSMD11-207ENST00000578397 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
PSMD11-207ENST00000578397 ATXN8OSP0DMR3 200 aa18.4■□□□□ 0.54
PSMD11-207ENST00000578397 C9orf131Q5VYM1 1079 aa18.4■□□□□ 0.54
PSMD11-207ENST00000578397 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
PSMD11-207ENST00000578397 ZNF652Q9Y2D9 606 aa18.4■□□□□ 0.54
PSMD11-207ENST00000578397 MYBBP1AQ9BQG0 1328 aaKnown RBP18.4■□□□□ 0.54
PSMD11-207ENST00000578397 PDE6BP35913 854 aa18.39■□□□□ 0.53
PSMD11-207ENST00000578397 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
PSMD11-207ENST00000578397 PRR5LQ6MZQ0 368 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 628.2 ms