RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 SBF1O95248 1867 aa18.56■□□□□ 0.56
UPF3AP2-202ENST00000578315 CYP19A1P11511 503 aaPredicted RBP18.56■□□□□ 0.56
UPF3AP2-202ENST00000578315 NFIXQ14938 502 aa18.56■□□□□ 0.56
UPF3AP2-202ENST00000578315 COL13A1Q5TAT6 717 aaPredicted RBP18.55■□□□□ 0.56
UPF3AP2-202ENST00000578315 TNRC6CQ9HCJ0 1690 aaKnown RBP18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 HMOX1P09601 288 aa18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 ZBTB1Q9Y2K1 713 aa18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 COL15A1P39059 1388 aa18.54■□□□□ 0.56
UPF3AP2-202ENST00000578315 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
UPF3AP2-202ENST00000578315 SERPINB2P05120 415 aa18.53■□□□□ 0.56
UPF3AP2-202ENST00000578315 PRELPP51888 382 aa18.53■□□□□ 0.56
UPF3AP2-202ENST00000578315 JMYQ8N9B5 988 aa18.53■□□□□ 0.56
UPF3AP2-202ENST00000578315 SMC1BQ8NDV3 1235 aa18.53■□□□□ 0.56
UPF3AP2-202ENST00000578315 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.56
UPF3AP2-202ENST00000578315 CAPN15O75808 1086 aa18.51■□□□□ 0.55
UPF3AP2-202ENST00000578315 LMNB1P20700 586 aa18.51■□□□□ 0.55
UPF3AP2-202ENST00000578315 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
UPF3AP2-202ENST00000578315 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
UPF3AP2-202ENST00000578315 C2CD5Q86YS7 1000 aa18.51■□□□□ 0.55
UPF3AP2-202ENST00000578315 TTLL6Q8N841 843 aa18.5■□□□□ 0.55
UPF3AP2-202ENST00000578315 VIRMAQ69YN4 1812 aaKnown RBP18.49■□□□□ 0.55
UPF3AP2-202ENST00000578315 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
UPF3AP2-202ENST00000578315 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
UPF3AP2-202ENST00000578315 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
UPF3AP2-202ENST00000578315 MRC1P22897 1456 aa18.49■□□□□ 0.55
UPF3AP2-202ENST00000578315 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
UPF3AP2-202ENST00000578315 H0YIN7 160 aa18.48■□□□□ 0.55
UPF3AP2-202ENST00000578315 VEGFAP15692 232 aaPredicted RBP18.48■□□□□ 0.55
UPF3AP2-202ENST00000578315 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
UPF3AP2-202ENST00000578315 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
UPF3AP2-202ENST00000578315 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
UPF3AP2-202ENST00000578315 CCDC24Q8N4L8 307 aa18.47■□□□□ 0.55
UPF3AP2-202ENST00000578315 DLEC1Q9Y238 1755 aa18.47■□□□□ 0.55
UPF3AP2-202ENST00000578315 PCNTO95613 3336 aa18.47■□□□□ 0.55
UPF3AP2-202ENST00000578315 ZC3H4Q9UPT8 1303 aaKnown RBP18.47■□□□□ 0.55
UPF3AP2-202ENST00000578315 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
UPF3AP2-202ENST00000578315 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
UPF3AP2-202ENST00000578315 NFKBIEO00221 500 aa18.46■□□□□ 0.55
UPF3AP2-202ENST00000578315 TNS4Q8IZW8 715 aa18.45■□□□□ 0.54
UPF3AP2-202ENST00000578315 TTC5Q8N0Z6 440 aa18.45■□□□□ 0.54
UPF3AP2-202ENST00000578315 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
UPF3AP2-202ENST00000578315 ZNF622Q969S3 477 aaKnown RBP eCLIP18.45■□□□□ 0.54
UPF3AP2-202ENST00000578315 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
UPF3AP2-202ENST00000578315 TBC1D9BQ66K14 1250 aa18.44■□□□□ 0.54
UPF3AP2-202ENST00000578315 C21orf2O43822 256 aa18.43■□□□□ 0.54
UPF3AP2-202ENST00000578315 DIAPH1O60610 1272 aaKnown RBP18.43■□□□□ 0.54
UPF3AP2-202ENST00000578315 STARD3NLO95772 234 aa18.43■□□□□ 0.54
UPF3AP2-202ENST00000578315 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
UPF3AP2-202ENST00000578315 POTECB2RU33 542 aa18.42■□□□□ 0.54
UPF3AP2-202ENST00000578315 CNGB1Q14028 1251 aaPredicted RBP18.42■□□□□ 0.54
UPF3AP2-202ENST00000578315 CC2D1BQ5T0F9 858 aaKnown RBP18.42■□□□□ 0.54
UPF3AP2-202ENST00000578315 TBC1D2BQ9UPU7 963 aa18.42■□□□□ 0.54
UPF3AP2-202ENST00000578315 UBR2Q8IWV8 1755 aa18.42■□□□□ 0.54
UPF3AP2-202ENST00000578315 A0A087WZG4 1122 aa18.41■□□□□ 0.54
UPF3AP2-202ENST00000578315 HSPA1AP0DMV8 641 aaKnown RBP18.41■□□□□ 0.54
UPF3AP2-202ENST00000578315 HSPA1BP0DMV9 641 aaKnown RBP18.41■□□□□ 0.54
UPF3AP2-202ENST00000578315 ZNF496Q96IT1 587 aaPredicted RBP18.41■□□□□ 0.54
UPF3AP2-202ENST00000578315 ANKRD31Q8N7Z5 1873 aa18.41■□□□□ 0.54
UPF3AP2-202ENST00000578315 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
UPF3AP2-202ENST00000578315 DPY19L2Q6NUT2 758 aa18.4■□□□□ 0.54
UPF3AP2-202ENST00000578315 PDE6BP35913 854 aa18.39■□□□□ 0.53
UPF3AP2-202ENST00000578315 TEFQ10587 303 aa18.39■□□□□ 0.53
UPF3AP2-202ENST00000578315 PRR5LQ6MZQ0 368 aa18.39■□□□□ 0.53
UPF3AP2-202ENST00000578315 BRIP1Q9BX63 1249 aa18.39■□□□□ 0.53
UPF3AP2-202ENST00000578315 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
UPF3AP2-202ENST00000578315 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
UPF3AP2-202ENST00000578315 ZNF790Q6PG37 636 aa18.38■□□□□ 0.53
UPF3AP2-202ENST00000578315 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
UPF3AP2-202ENST00000578315 KIF7Q2M1P5 1343 aa18.38■□□□□ 0.53
UPF3AP2-202ENST00000578315 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
UPF3AP2-202ENST00000578315 NPHP1O15259 732 aa18.37■□□□□ 0.53
UPF3AP2-202ENST00000578315 A1BGP04217 495 aa18.37■□□□□ 0.53
UPF3AP2-202ENST00000578315 SCN7AQ01118 1682 aa18.37■□□□□ 0.53
UPF3AP2-202ENST00000578315 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
UPF3AP2-202ENST00000578315 DDNO94850 711 aaPredicted RBP18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 TEX13AQ9BXU3 409 aaPredicted RBP18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 TAOK3Q9H2K8 898 aa18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 FER1L6Q2WGJ9 1857 aa18.35■□□□□ 0.53
UPF3AP2-202ENST00000578315 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 KCNQ3O43525 872 aa18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 IL6STP40189 918 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 NPM2Q86SE8 214 aaKnown RBP18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
UPF3AP2-202ENST00000578315 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.53
UPF3AP2-202ENST00000578315 CAMTA2O94983 1202 aa18.33■□□□□ 0.52
UPF3AP2-202ENST00000578315 CHADLQ6NUI6 762 aa18.33■□□□□ 0.52
UPF3AP2-202ENST00000578315 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
UPF3AP2-202ENST00000578315 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
UPF3AP2-202ENST00000578315 FMNL2Q96PY5 1086 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms