RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
RAB11FIP4-202ENST00000578148 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
RAB11FIP4-202ENST00000578148 COL15A1P39059 1388 aa12.01□□□□□ -0.49
RAB11FIP4-202ENST00000578148 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 SBF1O95248 1867 aa12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 ZPR1O75312 459 aa12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 SLC39A6Q13433 755 aa12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 VSIG10Q8N0Z9 540 aa12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
RAB11FIP4-202ENST00000578148 TM4SF1P30408 202 aa11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 DALRD3Q5D0E6 543 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 NARFQ9UHQ1 456 aa11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 ZBTB1Q9Y2K1 713 aa11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
RAB11FIP4-202ENST00000578148 TNRC6CQ9HCJ0 1690 aaKnown RBP11.98□□□□□ -0.49
RAB11FIP4-202ENST00000578148 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
RAB11FIP4-202ENST00000578148 TOMM70O94826 608 aa11.97□□□□□ -0.49
RAB11FIP4-202ENST00000578148 CHRNA5P30532 468 aa11.97□□□□□ -0.49
RAB11FIP4-202ENST00000578148 NFIXQ14938 502 aa11.97□□□□□ -0.49
RAB11FIP4-202ENST00000578148 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
RAB11FIP4-202ENST00000578148 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.49
RAB11FIP4-202ENST00000578148 GAS2L2Q8NHY3 880 aa11.96□□□□□ -0.49
RAB11FIP4-202ENST00000578148 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
RAB11FIP4-202ENST00000578148 NMRK2Q9NPI5 230 aa11.96□□□□□ -0.49
RAB11FIP4-202ENST00000578148 ZC3H4Q9UPT8 1303 aaKnown RBP11.95□□□□□ -0.5
RAB11FIP4-202ENST00000578148 ZBTB22O15209 634 aa11.95□□□□□ -0.5
RAB11FIP4-202ENST00000578148 APLP1P51693 650 aa11.95□□□□□ -0.5
RAB11FIP4-202ENST00000578148 ANKRD31Q8N7Z5 1873 aa11.95□□□□□ -0.5
RAB11FIP4-202ENST00000578148 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 CEMIPQ8WUJ3 1361 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 HEG1Q9ULI3 1381 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 KDM2BQ8NHM5 1336 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 U2SURPO15042 1029 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 STARD3NLO95772 234 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 TEFQ10587 303 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 RNF181Q9P0P0 153 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 BCORQ6W2J9 1755 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
RAB11FIP4-202ENST00000578148 CARMIL3Q8ND23 1372 aa11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 A0A087WZG4 1122 aa11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 SERPINB2P05120 415 aa11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 CANXP27824 592 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 ZNF790Q6PG37 636 aa11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 ZNF496Q96IT1 587 aaPredicted RBP11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 COL11A2P13942 1736 aaPredicted RBP11.93□□□□□ -0.5
RAB11FIP4-202ENST00000578148 CCDC88AQ3V6T2 1871 aa11.92□□□□□ -0.5
RAB11FIP4-202ENST00000578148 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
RAB11FIP4-202ENST00000578148 TEX13AQ9BXU3 409 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP4-202ENST00000578148 IL6STP40189 918 aaPredicted RBP11.91□□□□□ -0.5
RAB11FIP4-202ENST00000578148 RASSF7Q02833 373 aa11.91□□□□□ -0.5
RAB11FIP4-202ENST00000578148 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
RAB11FIP4-202ENST00000578148 CFAP53Q96M91 514 aa11.91□□□□□ -0.5
RAB11FIP4-202ENST00000578148 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
RAB11FIP4-202ENST00000578148 FSTL1Q12841 308 aa11.9□□□□□ -0.5
RAB11FIP4-202ENST00000578148 C2CD5Q86YS7 1000 aa11.9□□□□□ -0.5
RAB11FIP4-202ENST00000578148 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
RAB11FIP4-202ENST00000578148 RSPH6AQ9H0K4 717 aa11.9□□□□□ -0.5
RAB11FIP4-202ENST00000578148 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
RAB11FIP4-202ENST00000578148 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.51
RAB11FIP4-202ENST00000578148 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.51
RAB11FIP4-202ENST00000578148 FER1L6Q2WGJ9 1857 aa11.89□□□□□ -0.51
RAB11FIP4-202ENST00000578148 H0YIN7 160 aa11.89□□□□□ -0.51
RAB11FIP4-202ENST00000578148 LMNB1P20700 586 aa11.89□□□□□ -0.51
RAB11FIP4-202ENST00000578148 PRKAR2BP31323 418 aa11.89□□□□□ -0.51
RAB11FIP4-202ENST00000578148 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP4-202ENST00000578148 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
RAB11FIP4-202ENST00000578148 BICDL1Q6ZP65 573 aa11.88□□□□□ -0.51
RAB11FIP4-202ENST00000578148 DNAJC5GQ8N7S2 189 aa11.88□□□□□ -0.51
RAB11FIP4-202ENST00000578148 PHACTR3Q96KR7 559 aa11.88□□□□□ -0.51
RAB11FIP4-202ENST00000578148 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP4-202ENST00000578148 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 NFKBIEO00221 500 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 PDE6BP35913 854 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 PRELPP51888 382 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 PRR5LQ6MZQ0 368 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 NPM2Q86SE8 214 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 BRIP1Q9BX63 1249 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 RRAGCQ9HB90 399 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
RAB11FIP4-202ENST00000578148 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
RAB11FIP4-202ENST00000578148 A1BGP04217 495 aa11.86□□□□□ -0.51
RAB11FIP4-202ENST00000578148 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
RAB11FIP4-202ENST00000578148 SMC1BQ8NDV3 1235 aa11.86□□□□□ -0.51
RAB11FIP4-202ENST00000578148 KCNQ3O43525 872 aa11.85□□□□□ -0.51
RAB11FIP4-202ENST00000578148 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
RAB11FIP4-202ENST00000578148 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
RAB11FIP4-202ENST00000578148 SETDB2Q96T68 719 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms