RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
PPP4R1-207ENST00000578010 NCAPD2Q15021 1401 aa8.8□□□□□ -1
PPP4R1-207ENST00000578010 RIOK3O14730 519 aaKnown RBP8.79□□□□□ -1
PPP4R1-207ENST00000578010 HTATSF1O43719 755 aaKnown RBP8.79□□□□□ -1
PPP4R1-207ENST00000578010 METRNQ9UJH8 293 aa8.79□□□□□ -1
PPP4R1-207ENST00000578010 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
PPP4R1-207ENST00000578010 LAS1LQ9Y4W2 734 aaKnown RBP8.79□□□□□ -1
PPP4R1-207ENST00000578010 BCL9O00512 1426 aa8.79□□□□□ -1
PPP4R1-207ENST00000578010 EP400Q96L91 3159 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 COL3A1P02461 1466 aaPredicted RBP8.78□□□□□ -1
PPP4R1-207ENST00000578010 BTBD11A6QL63 1104 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 PLSCR1O15162 318 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 TAF7Q15545 349 aaPredicted RBP8.78□□□□□ -1
PPP4R1-207ENST00000578010 LHX8Q68G74 356 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 SMARCC1Q92922 1105 aaPredicted RBP8.78□□□□□ -1
PPP4R1-207ENST00000578010 THUMPD2Q9BTF0 503 aaKnown RBP8.78□□□□□ -1
PPP4R1-207ENST00000578010 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 ATG3Q9NT62 314 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 ASAP1Q9ULH1 1129 aa8.78□□□□□ -1
PPP4R1-207ENST00000578010 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
PPP4R1-207ENST00000578010 ECM2O94769 699 aaPredicted RBP8.77□□□□□ -1.01
PPP4R1-207ENST00000578010 KCNQ4P56696 695 aa8.77□□□□□ -1.01
PPP4R1-207ENST00000578010 SLC39A6Q13433 755 aa8.77□□□□□ -1.01
PPP4R1-207ENST00000578010 CAMKK2Q96RR4 588 aa8.77□□□□□ -1.01
PPP4R1-207ENST00000578010 MAP3K5Q99683 1374 aa8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 TXNRD1Q16881 649 aa8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 TTC5Q8N0Z6 440 aa8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 CCNL1Q9UK58 526 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 LY75O60449 1722 aa8.76□□□□□ -1.01
PPP4R1-207ENST00000578010 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
PPP4R1-207ENST00000578010 R3HDM1Q15032 1099 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-207ENST00000578010 SCN11AQ9UI33 1791 aa8.75□□□□□ -1.01
PPP4R1-207ENST00000578010 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 LOC102724428A0A0B4J2F2 783 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 KCNQ3O43525 872 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 SIK1P57059 783 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 SLC27A3Q5K4L6 730 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 TSPYL4Q9UJ04 414 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 C5P01031 1676 aa8.74□□□□□ -1.01
PPP4R1-207ENST00000578010 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-207ENST00000578010 CALD1Q05682 793 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-207ENST00000578010 ZNF790Q6PG37 636 aa8.73□□□□□ -1.01
PPP4R1-207ENST00000578010 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
PPP4R1-207ENST00000578010 STK32BQ9NY57 414 aa8.73□□□□□ -1.01
PPP4R1-207ENST00000578010 WWC1Q8IX03 1113 aa8.72□□□□□ -1.01
PPP4R1-207ENST00000578010 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
PPP4R1-207ENST00000578010 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
PPP4R1-207ENST00000578010 PALLDQ8WX93 1383 aa8.72□□□□□ -1.01
PPP4R1-207ENST00000578010 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.01
PPP4R1-207ENST00000578010 TUBGCP6Q96RT7 1819 aa8.71□□□□□ -1.01
PPP4R1-207ENST00000578010 GOLGA2Q08379 1002 aa8.71□□□□□ -1.02
PPP4R1-207ENST00000578010 ZNF496Q96IT1 587 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-207ENST00000578010 TFCP2L1Q9NZI6 479 aa8.71□□□□□ -1.02
PPP4R1-207ENST00000578010 PAPPAQ13219 1627 aa8.71□□□□□ -1.02
PPP4R1-207ENST00000578010 CHL1O00533 1208 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 SEC24BO95487 1268 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 STARD3NLO95772 234 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 GNAI1P63096 354 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 IRX5P78411 483 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 ITPK1Q13572 414 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 SLC15A2Q16348 729 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 WDR63Q8IWG1 891 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 DNAJC10Q8IXB1 793 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 NGEFQ8N5V2 710 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 AK7Q96M32 723 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 CFAP44Q96MT7 982 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 ARXQ96QS3 562 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 TEX13AQ9BXU3 409 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 ANO8Q9HCE9 1232 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 DLG5Q8TDM6 1919 aa8.7□□□□□ -1.02
PPP4R1-207ENST00000578010 LRP5O75197 1615 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 POTEFA5A3E0 1075 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 ELL2O00472 640 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 SNRPA1P09661 255 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 EIF2S2P20042 333 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 EIF4A1P60842 406 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 HNRNPUQ00839 825 aaKnown RBP eCLIP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 MKRN3Q13064 507 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 VSIG10Q8N0Z9 540 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 OCEL1Q9H607 264 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 BABAM1Q9NWV8 329 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
PPP4R1-207ENST00000578010 C4BP0C0L5 1744 aa8.68□□□□□ -1.02
PPP4R1-207ENST00000578010 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
PPP4R1-207ENST00000578010 PHF14O94880 888 aa8.68□□□□□ -1.02
PPP4R1-207ENST00000578010 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-207ENST00000578010 TRAPPC3LQ5T215 181 aa8.68□□□□□ -1.02
PPP4R1-207ENST00000578010 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
PPP4R1-207ENST00000578010 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms