RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
CUEDC1-204ENST00000577497 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
CUEDC1-204ENST00000577497 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
CUEDC1-204ENST00000577497 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
CUEDC1-204ENST00000577497 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
CUEDC1-204ENST00000577497 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
CUEDC1-204ENST00000577497 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 POLRMTO00411 1230 aaKnown RBP18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 ZPR1O75312 459 aa18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 DPEP1P16444 411 aa18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 TM4SF1P30408 202 aa18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 TGFB2P61812 414 aa18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 NARFQ9UHQ1 456 aa18.11■□□□□ 0.49
CUEDC1-204ENST00000577497 BRCA1P38398 1863 aaKnown RBP18.1■□□□□ 0.49
CUEDC1-204ENST00000577497 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
CUEDC1-204ENST00000577497 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
CUEDC1-204ENST00000577497 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 STARD3NLO95772 234 aa18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 KCNA3P22001 575 aa18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 NFIXQ14938 502 aa18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 RTF1Q92541 710 aaKnown RBP18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
CUEDC1-204ENST00000577497 DLG5Q8TDM6 1919 aa18.08■□□□□ 0.49
CUEDC1-204ENST00000577497 SCN7AQ01118 1682 aa18.08■□□□□ 0.48
CUEDC1-204ENST00000577497 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 ADCY9O60503 1353 aa18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 NRXN2Q9P2S2 1712 aa18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 A1BGP04217 495 aa18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 BCS1LQ9Y276 419 aa18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
CUEDC1-204ENST00000577497 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
CUEDC1-204ENST00000577497 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
CUEDC1-204ENST00000577497 CHRNA5P30532 468 aa18.05■□□□□ 0.48
CUEDC1-204ENST00000577497 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
CUEDC1-204ENST00000577497 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
CUEDC1-204ENST00000577497 TBC1D2BQ9UPU7 963 aa18.05■□□□□ 0.48
CUEDC1-204ENST00000577497 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
CUEDC1-204ENST00000577497 RALBP1Q15311 655 aa18.04■□□□□ 0.48
CUEDC1-204ENST00000577497 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
CUEDC1-204ENST00000577497 THUMPD2Q9BTF0 503 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-204ENST00000577497 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
CUEDC1-204ENST00000577497 IL6STP40189 918 aaPredicted RBP18.03■□□□□ 0.48
CUEDC1-204ENST00000577497 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.48
CUEDC1-204ENST00000577497 SERPINB2P05120 415 aa18.02■□□□□ 0.48
CUEDC1-204ENST00000577497 NFE2L2Q16236 605 aa18.02■□□□□ 0.48
CUEDC1-204ENST00000577497 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
CUEDC1-204ENST00000577497 BCORQ6W2J9 1755 aa18.02■□□□□ 0.47
CUEDC1-204ENST00000577497 ARFGEF1Q9Y6D6 1849 aa18.01■□□□□ 0.47
CUEDC1-204ENST00000577497 A0A087WZG4 1122 aa18.01■□□□□ 0.47
CUEDC1-204ENST00000577497 SNRPA1P09661 255 aaKnown RBP18.01■□□□□ 0.47
CUEDC1-204ENST00000577497 TAF7Q15545 349 aaPredicted RBP18.01■□□□□ 0.47
CUEDC1-204ENST00000577497 GIGYF1O75420 1035 aaPredicted RBP18■□□□□ 0.47
CUEDC1-204ENST00000577497 CAMTA2O94983 1202 aa18■□□□□ 0.47
CUEDC1-204ENST00000577497 NEFMP07197 916 aa18■□□□□ 0.47
CUEDC1-204ENST00000577497 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
CUEDC1-204ENST00000577497 PIM2Q9P1W9 311 aa18■□□□□ 0.47
CUEDC1-204ENST00000577497 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 MAPK8IP3Q9UPT6 1336 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 LAMB4A4D0S4 1761 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 NBPF26B4DH59 902 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 C1QTNF8P60827 252 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 NBPF10Q6P3W6 841 aaKnown RBP17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 ARHGAP27Q6ZUM4 889 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 NBPF15Q8N660 670 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
CUEDC1-204ENST00000577497 DALRD3Q5D0E6 543 aaKnown RBP17.98■□□□□ 0.47
CUEDC1-204ENST00000577497 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
CUEDC1-204ENST00000577497 CCDC24Q8N4L8 307 aa17.98■□□□□ 0.47
CUEDC1-204ENST00000577497 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
CUEDC1-204ENST00000577497 GPBP1L1Q9HC44 474 aaPredicted RBP17.96■□□□□ 0.47
CUEDC1-204ENST00000577497 COL11A2P13942 1736 aaPredicted RBP17.95■□□□□ 0.46
CUEDC1-204ENST00000577497 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
CUEDC1-204ENST00000577497 CCDC146Q8IYE0 955 aa17.95■□□□□ 0.46
CUEDC1-204ENST00000577497 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
CUEDC1-204ENST00000577497 EIF4A1P60842 406 aaKnown RBP17.94■□□□□ 0.46
CUEDC1-204ENST00000577497 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
CUEDC1-204ENST00000577497 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
CUEDC1-204ENST00000577497 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
CUEDC1-204ENST00000577497 RIPK4P57078 832 aa17.93■□□□□ 0.46
CUEDC1-204ENST00000577497 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
CUEDC1-204ENST00000577497 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
CUEDC1-204ENST00000577497 C9orf131Q5VYM1 1079 aa17.92■□□□□ 0.46
CUEDC1-204ENST00000577497 SETDB2Q96T68 719 aa17.92■□□□□ 0.46
CUEDC1-204ENST00000577497 PRKRIP1Q9H875 184 aaPredicted RBP17.92■□□□□ 0.46
CUEDC1-204ENST00000577497 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
CUEDC1-204ENST00000577497 H0YIN7 160 aa17.9■□□□□ 0.46
CUEDC1-204ENST00000577497 RASSF7Q02833 373 aa17.9■□□□□ 0.46
CUEDC1-204ENST00000577497 HLFQ16534 295 aa17.9■□□□□ 0.46
CUEDC1-204ENST00000577497 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
CUEDC1-204ENST00000577497 BRIP1Q9BX63 1249 aa17.9■□□□□ 0.46
CUEDC1-204ENST00000577497 PRELPP51888 382 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 TTLL6Q8N841 843 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 TSPYL4Q9UJ04 414 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
CUEDC1-204ENST00000577497 KIF3CO14782 793 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms